HOMD ::species::Treponema sp._HMT_231

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Treponema sp._HMT_231

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Full Lineage: Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema sp._HMT_231

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.350	0.118	0.000	0.018	0.009	0.025	0.043	0.230	0.002	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.918	0.330	0.000	0.033	0.007	0.064	0.036	0.284	0.000	0.000
Stdev	0.801	0.383	0.003	0.074	0.041	0.082	0.287	0.814	0.008	0.000
Prev	48.052	24.675	1.299	12.987	10.390	23.377	15.584	32.468	6.494	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to T. vincentii and T. sp. HMT 231 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.214	0.062	0.002	0.014	0.007	0.027	0.033	0.070	0.011	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.572	0.199	0.000	0.026	0.020	0.081	0.054	0.148	0.032	0.000
Stdev	0.443	0.168	0.008	0.064	0.021	0.045	0.155	0.227	0.029	0.000
Prev	52.703	39.865	6.081	25.676	22.297	48.649	37.162	46.622	27.703	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.082	0.013	0.001	0.003	0.001	0.001	0.005	0.034	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.395	0.047	0.000	0.011	0.001	0.003	0.013	0.096	0.000	0.000
Stdev	0.176	0.026	0.004	0.006	0.004	0.002	0.012	0.091	0.001	0.000
Prev	48.649	50.000	6.977	34.286	10.714	26.000	36.364	51.613	10.000	0.000