HOMD ::species::Streptococcus sp._HMT_056

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Streptococcus sp._HMT_056

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Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp._HMT_056

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to S. parasanguinis clade 411,S. peroris, S. sp. HMT 056, and S. sp. HMT 057 were assigned one fourth to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.045	0.060	0.072	0.061	0.065	0.041	0.053	0.070	0.115	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.005	0.000
90^thp	0.152	0.153	0.256	0.152	0.183	0.092	0.128	0.195	0.257	0.000
Stdev	0.092	0.128	0.153	0.102	0.072	0.095	0.110	0.087	0.129	0.000
Prev	48.052	50.649	48.052	76.623	77.922	48.052	58.442	76.623	90.909	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. gordonii and S. sp. HMT 056 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.263	0.377	0.109	0.204	0.051	0.055	0.021	0.029	0.010	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.731	0.936	0.178	0.488	0.111	0.138	0.048	0.052	0.025	0.000
Stdev	0.514	0.553	0.353	0.369	0.117	0.084	0.056	0.131	0.031	0.002
Prev	80.405	87.838	40.541	84.459	60.811	69.595	43.919	43.243	27.703	1.399

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.189	0.230	0.138	0.218	0.307	0.220	0.224	0.165	0.177	0.000
10^thp	0.000	0.005	0.007	0.039	0.024	0.028	0.039	0.008	0.026	0.000
90^thp	0.274	0.635	0.386	0.538	0.670	0.440	0.556	0.316	0.428	0.000
Stdev	0.814	0.436	0.153	0.225	0.539	0.234	0.212	0.205	0.194	0.002
Prev	87.838	94.118	97.674	100.000	100.000	100.000	100.000	93.548	100.000	5.000