HOMD ::species::Prevotella sp._HMT_396

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Prevotella sp._HMT_396

Download Options

Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp._HMT_396

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)	No Notes

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. sp. HMT 305 and 396 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.006	0.004	0.004	0.017	0.052	0.244	0.111	0.082	0.083	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.001	0.061	0.155	0.598	0.281	0.206	0.236	0.000
Stdev	0.027	0.027	0.015	0.036	0.081	0.411	0.195	0.141	0.128	0.000
Prev	8.108	6.081	10.135	31.757	54.730	74.324	64.865	62.838	59.459	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.003	0.001	0.027	0.009	0.020	0.088	0.036	0.035	0.055	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.006	0.000	0.000	0.000
90^thp	0.004	0.003	0.053	0.027	0.060	0.245	0.102	0.105	0.114	0.000
Stdev	0.012	0.003	0.073	0.016	0.031	0.164	0.038	0.039	0.092	0.000
Prev	20.270	23.529	37.209	48.571	64.286	82.000	93.939	83.871	82.500	0.000