HOMD ::species::Prevotella sp._HMT_300

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Prevotella sp._HMT_300

Download Options

Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp._HMT_300

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)	No Notes

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. sp. HMT 292, 293, and 300 were assigned one-third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.084	0.042	0.000	0.009	0.009	0.032	0.003	0.010	0.003	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.245	0.105	0.000	0.023	0.014	0.084	0.009	0.030	0.004	0.000
Stdev	0.182	0.108	0.000	0.025	0.045	0.077	0.009	0.027	0.020	0.000
Prev	62.162	38.514	0.000	26.351	20.270	56.081	16.216	27.027	10.811	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.241	0.134	0.014	0.025	0.004	0.010	0.003	0.004	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.656	0.228	0.017	0.038	0.010	0.030	0.008	0.006	0.000	0.000
Stdev	0.694	0.437	0.074	0.075	0.008	0.022	0.004	0.012	0.002	0.000
Prev	67.568	70.588	27.907	51.429	42.857	48.000	42.424	32.258	10.000	0.000