HOMD ::species::Porphyromonas sp._HMT

Species: Porphyromonas sp._HMT_275

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Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; Porphyromonas sp._HMT_275

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to P. sp. HMT 275 and P. sp. HMT 284 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.377	0.274	0.025	0.047	0.035	0.111	0.005	0.007	0.006	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.160	0.939	0.013	0.040	0.041	0.261	0.015	0.015	0.025	0.000
Stdev	0.724	0.450	0.131	0.240	0.195	0.260	0.018	0.044	0.020	0.000
Prev	57.143	58.442	14.286	28.571	24.675	49.351	14.286	11.688	14.286	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. catoniae and P. sp. HMT 275, 277, and 284 were assigned one-fourth to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.337	0.375	0.158	0.058	0.019	0.098	0.012	0.023	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.893	1.056	0.442	0.129	0.043	0.262	0.028	0.047	0.012	0.000
Stdev	0.471	0.460	0.351	0.165	0.038	0.118	0.032	0.064	0.011	0.000
Prev	81.757	87.162	58.784	69.595	62.162	85.135	37.162	49.324	30.405	0.699

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 275, 277, and 278 were assigned one third to each taxon.

Reads equally close to HMT 275 and 278 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.179	0.098	0.017	0.019	0.046	0.043	0.011	0.006	0.006	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.317	0.353	0.041	0.022	0.068	0.128	0.021	0.020	0.008	0.000
Stdev	0.590	0.193	0.051	0.054	0.139	0.092	0.028	0.013	0.018	0.000
Prev	54.054	79.412	46.512	57.143	60.714	56.000	45.455	41.935	35.000	0.000

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