Species: Neisseria meningitidis
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to N. cinerea, N. meningitidis, and N. polysaccharea were assigned one third to each taxon
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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Avg | 0.004 | 0.007 | 0.441 | 0.020 | 0.061 | 0.009 | 0.029 | 0.006 | 0.001 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.009 | 0.012 | 1.660 | 0.032 | 0.073 | 0.027 | 0.021 | 0.023 | 0.000 | 0.000 |
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Stdev | 0.014 | 0.032 | 1.358 | 0.073 | 0.285 | 0.028 | 0.212 | 0.014 | 0.009 | 0.000 |
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Prev | 12.987 | 16.883 | 37.662 | 22.078 | 29.870 | 19.481 | 18.182 | 24.675 | 5.195 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to HMT 669 and 956 were assigned half to each taxon.
Reads equally close to HMT 669, 737, and 956 were assigned one third to each taxon.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
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Avg | 0.003 | 0.001 | 0.033 | 0.011 | 0.045 | 0.047 | 0.030 | 0.024 | 0.086 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.003 | 0.002 | 0.028 | 0.019 | 0.107 | 0.072 | 0.080 | 0.014 | 0.261 | 0.000 |
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Stdev | 0.014 | 0.003 | 0.146 | 0.038 | 0.108 | 0.139 | 0.081 | 0.090 | 0.224 | 0.000 |
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Prev | 21.622 | 26.471 | 55.814 | 51.429 | 78.571 | 48.000 | 51.515 | 54.839 | 52.500 | 0.000 |
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