HOMD ::species::Leptotrichia sp._HMT_417

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Leptotrichia sp._HMT_417

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia sp._HMT_417

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to L. wadei and L. sp. HMT 417 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.051	0.024	0.013	0.035	0.114	0.074	0.721	0.506	0.353	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.075	0.048	0.015	0.105	0.361	0.157	2.314	1.582	0.909	0.000
Stdev	0.237	0.086	0.048	0.080	0.232	0.180	1.189	0.853	0.689	0.000
Prev	35.065	31.169	20.779	44.156	67.532	55.844	87.013	80.519	71.429	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to L. sp. HMT 417 and 463 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.173	0.230	0.066	0.199	0.625	0.439	2.774	2.076	1.542	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.028	0.011	0.000	0.000
90^thp	0.349	0.332	0.105	0.671	2.240	1.446	7.737	6.408	5.606	0.000
Stdev	0.651	1.114	0.203	0.386	1.232	0.701	4.301	2.803	2.614	0.000
Prev	39.189	46.622	29.054	61.486	77.027	81.081	92.568	89.865	85.811	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 222 and 417 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.660	0.229	0.781	0.218	0.299	0.645	2.250	2.135	2.894	0.000
10^thp	0.000	0.000	0.000	0.002	0.003	0.007	0.075	0.049	0.004	0.000
90^thp	0.336	0.555	2.276	0.552	0.780	1.438	4.997	6.678	12.437	0.000
Stdev	3.666	0.631	2.039	0.449	0.366	1.633	2.774	2.795	5.696	0.000
Prev	72.973	82.353	76.744	91.429	89.286	94.000	93.939	96.774	90.000	0.000