HOMD ::species::Leptotrichia hofstadii

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Leptotrichia hofstadii

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Full Lineage: Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Leptotrichiaceae; Leptotrichia; Leptotrichia hofstadii

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to L. hofstadii and L. sp. HMT 909 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.035	0.090	0.003	0.029	0.003	0.007	0.002	0.003	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.096	0.247	0.000	0.013	0.009	0.017	0.002	0.010	0.000	0.000
Stdev	0.089	0.237	0.019	0.204	0.011	0.021	0.008	0.008	0.005	0.000
Prev	29.870	40.260	6.494	19.481	14.286	18.182	10.390	15.584	9.091	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to L. hofstadii and L. sp. HMT 909 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.203	0.414	0.014	0.031	0.010	0.031	0.009	0.014	0.008	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.563	1.352	0.010	0.078	0.036	0.093	0.029	0.044	0.020	0.000
Stdev	0.423	0.666	0.087	0.075	0.022	0.050	0.020	0.032	0.027	0.000
Prev	68.243	72.297	11.486	48.649	28.378	48.649	28.378	34.459	25.676	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.378	1.200	0.036	0.127	0.081	0.009	0.015	0.007	0.005	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.717	3.431	0.109	0.371	0.144	0.021	0.025	0.020	0.021	0.000
Stdev	1.246	2.528	0.091	0.247	0.233	0.013	0.034	0.011	0.009	0.000
Prev	71.622	82.353	58.140	68.571	75.000	64.000	63.636	48.387	40.000	0.000