HOMD ::species::Lachnospiraceae_[G-3] bacterium_HMT_100

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Lachnospiraceae_[G-3] bacterium_HMT_100

Download Options

Full Lineage: Bacteria; Firmicutes; Clostridia; Eubacteriales; Lachnospiraceae; Lachnospiraceae_[G-3]; Lachnospiraceae_[G-3] bacterium_HMT_100

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.115	0.129	0.004	0.022	0.032	0.053	0.059	0.069	0.038	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.322	0.432	0.000	0.073	0.091	0.128	0.082	0.168	0.109	0.000
Stdev	0.164	0.216	0.018	0.043	0.094	0.166	0.216	0.216	0.106	0.000
Prev	61.039	50.649	7.792	38.961	36.364	29.870	23.377	40.260	22.078	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.125	0.172	0.003	0.029	0.042	0.078	0.115	0.138	0.071	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.363	0.496	0.000	0.098	0.137	0.245	0.300	0.392	0.147	0.000
Stdev	0.173	0.271	0.012	0.067	0.101	0.185	0.338	0.427	0.207	0.000
Prev	64.865	64.189	8.784	29.730	31.081	38.514	31.081	39.865	29.054	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.110	0.209	0.030	0.028	0.025	0.023	0.065	0.052	0.057	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.326	0.519	0.099	0.078	0.028	0.088	0.243	0.045	0.106	0.000
Stdev	0.255	0.432	0.050	0.045	0.072	0.043	0.131	0.147	0.173	0.000
Prev	63.514	70.588	62.791	57.143	60.714	58.000	48.485	41.935	35.000	0.000