HOMD ::species::Haemophilus influenzae

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Haemophilus influenzae

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Full Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.000	0.000	0.000	0.000	0.000	0.000	1.063	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.000	0.000	0.000	0.000	0.000	0.001	9.233	0.003	0.000	0.000
Prev	0.000	0.000	0.000	0.000	0.000	1.299	2.597	1.299	0.000	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to H. aegyptius, H. influenzae, and H. sp. HMT 259 were assigned one-third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.000	0.000	0.000	0.000	0.000	0.002	0.087	0.006	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.002	0.016	0.000	0.000
Stdev	0.001	0.001	0.000	0.002	0.000	0.008	0.960	0.022	0.001	0.000
Prev	1.351	1.351	0.676	2.703	0.000	8.784	10.811	15.541	2.027	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 259, 535, and 641 were assigned one-third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.000	0.000	0.015	0.007	0.001	0.000	0.011	0.071	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.001	0.022	0.003	0.003	0.000	0.028	0.014	0.000	0.000
Stdev	0.002	0.002	0.059	0.023	0.003	0.001	0.036	0.223	0.001	0.000
Prev	8.108	11.765	51.163	34.286	21.429	4.000	24.242	32.258	10.000	0.000