HOMD ::species::Capnocytophaga granulosa

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Capnocytophaga granulosa

Download Options

Full Lineage: Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga granulosa

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to C. gingivalis and C. granulosa were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	1.792	2.018	0.023	0.264	0.043	0.241	0.194	0.375	0.092	0.000
10^thp	0.111	0.105	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	3.990	4.685	0.052	0.334	0.114	0.570	0.593	0.979	0.218	0.000
Stdev	1.685	2.119	0.082	0.857	0.082	0.411	0.409	0.998	0.197	0.001
Prev	94.805	94.805	32.468	83.117	61.039	80.519	63.636	74.026	62.338	1.299

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.900	1.568	0.003	0.130	0.049	0.264	0.128	0.243	0.045	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	3.096	4.408	0.000	0.262	0.103	0.786	0.231	0.493	0.073	0.000
Stdev	1.397	2.349	0.015	0.380	0.172	0.419	0.394	1.005	0.172	0.001
Prev	78.378	82.432	8.108	66.892	45.270	72.297	43.919	47.297	31.757	0.699

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 325 and 337 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	1.321	2.216	0.037	0.085	0.439	0.033	0.158	0.023	0.034	0.000
10^thp	0.001	0.040	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	4.378	7.229	0.066	0.157	0.151	0.064	0.118	0.052	0.064	0.000
Stdev	3.210	2.821	0.094	0.182	2.116	0.052	0.665	0.044	0.116	0.000
Prev	89.189	97.059	67.442	85.714	78.571	80.000	66.667	67.742	55.000	0.000