HOMD ::species::Campylobacter showae

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Campylobacter showae

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Full Lineage: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter showae

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.807	0.723	0.265	0.046	0.050	0.380	0.145	0.243	0.055	0.001
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.712	1.832	0.477	0.107	0.149	0.980	0.510	0.723	0.133	0.000
Stdev	1.202	0.992	0.821	0.091	0.082	0.567	0.340	0.564	0.162	0.005
Prev	88.312	84.416	46.753	54.545	49.351	84.416	50.649	63.636	36.364	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to C. rectus and C. showae were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.174	0.164	0.078	0.013	0.014	0.108	0.034	0.063	0.014	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.496	0.433	0.146	0.051	0.042	0.342	0.083	0.170	0.023	0.000
Stdev	0.270	0.274	0.262	0.026	0.031	0.176	0.085	0.155	0.059	0.000
Prev	70.946	75.000	35.135	34.459	31.757	66.892	39.865	60.135	27.703	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.276	0.281	0.026	0.057	0.028	0.021	0.110	0.092	0.027	0.000
10^thp	0.000	0.001	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.821	0.674	0.098	0.114	0.040	0.054	0.207	0.094	0.048	0.000
Stdev	0.572	0.473	0.045	0.130	0.075	0.038	0.338	0.311	0.087	0.000
Prev	83.784	88.235	69.767	80.000	75.000	68.000	78.788	70.968	52.500	0.000