Species: Actinomyces sp._HMT_171
Download Options
BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
|
|
|
|
|
Notes:
reads equally close to A. viscosus and A. sp. HMT 171 were assigned half to each taxon
|
percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
|---|
| Avg | 1.087 | 1.198 | 0.013 | 0.071 | 0.021 | 0.045 | 0.095 | 0.005 | 0.002 | 0.000 |
|---|
| 10thp | 0.015 | 0.029 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
|---|
| 90thp | 2.613 | 2.419 | 0.035 | 0.113 | 0.061 | 0.114 | 0.030 | 0.014 | 0.002 | 0.000 |
|---|
| Stdev | 1.672 | 1.877 | 0.053 | 0.267 | 0.034 | 0.125 | 0.719 | 0.012 | 0.006 | 0.003 |
|---|
| Prev | 89.610 | 93.506 | 20.779 | 57.143 | 46.753 | 49.351 | 23.377 | 22.078 | 10.390 | 1.299 |
|---|
|
|
|
|
|
Notes:
Reads equally close to A. naeslundii, A. sp. HMT 170, and A. sp. HMT 171 were assigned one-third to each taxon.
Reads equally close to A. naeslundii, A. oris, and A. sp. HMT 169, 170, 171, and 175 were divided equally among taxa.
|
percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
|---|
| Avg | 0.561 | 0.671 | 0.030 | 0.128 | 0.033 | 0.030 | 0.016 | 0.016 | 0.004 | 0.000 |
|---|
| 10thp | 0.028 | 0.068 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
|---|
| 90thp | 1.331 | 1.489 | 0.065 | 0.265 | 0.062 | 0.076 | 0.026 | 0.021 | 0.010 | 0.000 |
|---|
| Stdev | 0.999 | 0.973 | 0.085 | 0.295 | 0.131 | 0.037 | 0.076 | 0.114 | 0.008 | 0.001 |
|---|
| Prev | 97.297 | 97.973 | 47.973 | 83.784 | 75.676 | 79.054 | 52.027 | 42.568 | 33.784 | 2.098 |
|---|
|
|
|
|
From: Dewhirst 35x9 data (not published yet)
|
Notes:
Reads equally close to HMT 171 and 175 were assigned half to each taxon.
|
percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
|---|
| Avg | 0.797 | 0.732 | 0.015 | 0.027 | 0.033 | 0.005 | 0.005 | 0.005 | 0.000 | 0.000 |
|---|
| 10thp | 0.008 | 0.021 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
|---|
| 90thp | 2.034 | 1.602 | 0.035 | 0.057 | 0.074 | 0.016 | 0.010 | 0.006 | 0.001 | 0.000 |
|---|
| Stdev | 1.627 | 1.832 | 0.032 | 0.043 | 0.053 | 0.009 | 0.012 | 0.016 | 0.001 | 0.000 |
|---|
| Prev | 95.946 | 100.000 | 67.442 | 85.714 | 75.000 | 62.000 | 42.424 | 35.484 | 12.500 | 0.000 |
|---|
|
|
