HOMD ::species::Actinomyces sp._HMT

Species: Actinomyces sp._HMT_169

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Full Lineage: Bacteria; Actinobacteria; Actinomycetia; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces sp._HMT_169

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to A. sp. HMT 169 and A. sp. HMT 175 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	1.554	1.923	0.143	0.502	0.067	0.103	0.022	0.022	0.006	0.000
10^thp	0.003	0.015	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	3.231	4.547	0.363	1.408	0.150	0.299	0.073	0.055	0.020	0.000
Stdev	3.204	3.593	0.389	1.062	0.143	0.157	0.047	0.049	0.018	0.000
Prev	89.610	92.208	58.442	80.519	71.429	64.935	40.260	41.558	25.974	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to A. naeslundii, A. oris, and A. sp. HMT 169, 170, 171, and 175 were divided equally among taxa.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.446	0.536	0.030	0.119	0.026	0.027	0.015	0.014	0.003	0.000
10^thp	0.020	0.043	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.087	1.184	0.065	0.235	0.056	0.062	0.023	0.019	0.009	0.000
Stdev	0.901	0.911	0.083	0.282	0.070	0.036	0.074	0.099	0.006	0.000
Prev	95.946	97.297	47.973	83.108	73.649	77.703	50.676	41.216	31.757	1.399

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 169 and 893 were assigned half to each taxon.

Reads equally close to HMT 169 and 175 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	1.872	3.016	0.280	0.404	0.195	0.062	0.024	0.032	0.005	0.001
10^thp	0.003	0.016	0.000	0.011	0.000	0.003	0.000	0.000	0.000	0.000
90^thp	5.581	7.900	0.302	1.132	0.532	0.140	0.030	0.009	0.012	0.000
Stdev	4.767	6.737	1.245	0.742	0.290	0.124	0.063	0.159	0.008	0.005
Prev	91.892	97.059	76.744	97.143	78.571	94.000	72.727	64.516	60.000	5.000

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