Page Help::Blast Databases
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Linkout to NCBI Blast+
BLAST Index
Blast Formats
Databases
Parameters
Blast Programs
Advanced Parameters
Linkout to NCBI Blast+
Available HOMD Databases
For RefSeq Blast:
- 1. eHOMD 16s rRNA RefSeq Version 15.22 (starts at pos 9)
- 2. eHOMD 16s rRNA RefSeq Version 15.22 (starts at pos 28)
- 3. eHOMD 16s rRNA RefSeq Version 15.21 (starts at pos 9)
- 4. eHOMD 16s rRNA RefSeq Version 15.21 (starts at pos 28)
For Genomes Blast:
1. Genomic DNA from all HOMD Genomes
=> Blast against the whole sequences of genomes annotated automatically by HOMD
2. DNA Sequences of Proteins from all HOMD Genomes
=> Blast against the orfs amino acids of genomes annotated automatically by HOMD
3. "organism": Genomic DNA
=> Blast against the whole sequence of "organism"
4. "organism": DNA of Annotated Proteins
=> Blast against only orfs amino acids of "organism"