HOME
Taxonomy
Taxon Table
Life Pages
Ecology (Abundance)
Dynamic Tree
Rank Level and Counts
Download Taxonomy Data
Taxonomy Version History
Genomes
Genome Table
CRISPR-Cas
JBrowse Genome Viewer Tool
Genomic Trees
»
Conserved Protein Tree
Ribosomal Protein Tree
16S rRNA Gene Tree
Genome Explorer and Annotations
BLAST Against All Genomes
BLAST Against One Genome
Anvi-server
(
BETA
)
Download Genomic Data
HOMD Reference Genome Version History
Proteomes
View Genomic Tree based on Conserved Proteins
All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
RefSeq BLAST Server
Old 16S BLAST
View 16S rRNA RefSeq Phylogenetic Tree
Download RefSeq Data
Version History
Animal Microbiomes
Mouse (MOMD)
Downloads
Download Batch HOMD Data
HOMD FTP Site
Resources
Old HOMD Site (v2)
Posters
Publications
Oralgen
»
www.oralgen.org Archive
Oralgen Genome Info
HOMD FTP Site
HOMD-v2
[Page-Help]
HOMD Help Content
How to Cite HOMD
Project Description
Strains and DNA Availability
People
Publications
Contact Us
Announcements
Search Help
16S rRNA RefSeq:
V15.23
Genomic RefSeq:
V10.1
Genome Table
There are 8622 genomes representing 568 taxa (Including 'NonOralRef' and 'Dropped' Taxa).
Download this Genome Data
:
[Browser]
[Text]
[Excel]
Genus by Alphabet:
[
All
]
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
Reset Filters
Find Genomes by Phylum:
Select a Phylum
Absconditabacteria_(SR1)
Actinobacteria
Bacteroidetes
Chlamydiae
Chlorobi
Chloroflexi
Cyanobacteria
Euryarchaeota
Firmicutes
Fusobacteria
Gracilibacteria_(GN02)
Ignavibacteriae
Lentisphaerae
Proteobacteria
Saccharibacteria_(TM7)
Spirochaetes
Synergistetes
Tenericutes
WPS-2
Clear
Paging:
On
Off
(500 rows / page)
Search This Table:
All Fields
Seq-ID
Taxon-ID
Genus
Species
Strain
Isolation Origin
Sequence Status
Submitter
Clear
Sort Column
:
SEQ-ID
Taxon-ID
Genus/Species
Species
Strain
Contigs
Length
GC
Reverse
Submit
Number of Records Found: 28 Showing: 28
SEQ-ID
TaxID
Genus
Species
Strain/Culture
Contigs
Combined
Length
GC(%)
Genome Info and Tools
Annotations
SEQF8777.1
HMT-568
Lacticaseibacillus
casei
LC5
1
3,132,867
47.92
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8778.1
HMT-568
Lacticaseibacillus
casei
MGB0470
1
2,940,907
47.9
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8779.1
HMT-568
Lacticaseibacillus
casei
FBL6
1
3,138,294
47.92
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8780.1
HMT-568
Lacticaseibacillus
casei
N
1
2,999,953
48.04
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8781.1
HMT-568
Lacticaseibacillus
casei
PB2021-BA03
182
2,819,213
47.68
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8782.1
HMT-568
Lacticaseibacillus
casei
BCRC 80156
147
2,829,905
47.73
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8783.1
HMT-568
Lacticaseibacillus
casei
BCRC 17487
137
2,820,150
47.72
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8784.1
HMT-568
Lacticaseibacillus
casei
L.cR4
25
2,848,043
50.43
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8785.1
HMT-568
Lacticaseibacillus
casei
N87
26
3,001,027
47.89
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8786.1
HMT-568
Lacticaseibacillus
casei
B900021
238
3,026,190
47.81
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8787.1
HMT-568
Lacticaseibacillus
casei
BIO5773
21
3,084,211
47.94
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8788.1
HMT-568
Lacticaseibacillus
casei
HUL 5
176
2,759,364
47.77
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8789.1
HMT-568
Lacticaseibacillus
casei
FAM 20446
147
2,946,858
47.73
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8790.1
HMT-568
Lacticaseibacillus
casei
UBLC-42
186
2,813,108
47.69
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8791.1
HMT-568
Lacticaseibacillus
casei
DS1_13
199
2,841,380
47.69
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8792.1
HMT-568
Lacticaseibacillus
casei
HUL 12
175
2,760,455
47.77
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8793.1
HMT-568
Lacticaseibacillus
casei
DS13_13
161
2,782,240
47.73
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8794.1
HMT-568
Lacticaseibacillus
casei
YNF-5
152
2,780,372
47.77
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF8795.1
HMT-568
Lacticaseibacillus
casei
867_LCAS
200
3,092,420
47.93
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF1246.1
HMT-568
Lacticaseibacillus
casei
BL23
1
3,079,196
46.34
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF1493.3
HMT-568
Lacticaseibacillus
casei
strain=Zhang
2
2,898,456
46.43
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2109.1
HMT-568
Lacticaseibacillus
casei
strain=BD-II
2
3,127,288
46.29
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2110.1
HMT-568
Lacticaseibacillus
casei
LC2W
2
3,077,434
46.31
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2493.1
HMT-568
Lacticaseibacillus
casei
CRF28
57
3,036,548
46.28
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2494.1
HMT-568
Lacticaseibacillus
casei
Lc-10
76
2,951,397
46.38
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2495.1
HMT-568
Lacticaseibacillus
casei
Lpc-37
150
3,075,253
46.27
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2496.1
HMT-568
Lacticaseibacillus
casei
M36
78
3,152,126
46.28
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF2566.1
HMT-568
Lacticaseibacillus
casei
LOCK919
2
3,143,369
46.22
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI