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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis GED7760B (SEQF8002.1)
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PROKKA Annotation for SEQF8002.1
Genome selected: Gardnerella vaginalis GED7760B
Contigs:25 Bases:1489151 bps
CDS:1127 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1127 [3 Pages]
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# Molecule PID Genome
Viewer		 NA (Length)(Seq)
 AA (Length)(Seq)
 Range Gene Gene Product
1001 SEQF8002.1_KQ956825.1 SEQF8002.1_01050 open 1011 [NA] 336 [AA] 10695-11705 galE UDP-glucose 4-epimerase
1002 SEQF8002.1_KQ956825.1 SEQF8002.1_01051 open 861 [NA] 286 [AA] 11976-12836 trmB tRNA (guanine-N(7)-)-methyltransferase
1003 SEQF8002.1_KQ956825.1 SEQF8002.1_01053 open 375 [NA] 124 [AA] 13237-13611 trxC Putative thioredoxin 2
1004 SEQF8002.1_KQ956825.1 SEQF8002.1_01054 open 1005 [NA] 334 [AA] 13765-14769 hypothetical protein
1005 SEQF8002.1_KQ956825.1 SEQF8002.1_01055 open 1725 [NA] 574 [AA] 14786-16510 mdtD Putative multidrug resistance protein MdtD
1006 SEQF8002.1_KQ956825.1 SEQF8002.1_01056 open 750 [NA] 249 [AA] 17496-18245 lacR Lactose phosphotransferase system repressor
1007 SEQF8002.1_KQ956825.1 SEQF8002.1_01057 open 741 [NA] 246 [AA] 18370-19110 hypothetical protein
1008 SEQF8002.1_KQ956825.1 SEQF8002.1_01058 open 2820 [NA] 939 [AA] 19097-21916 ctpE Calcium-transporting ATPase CtpE
1009 SEQF8002.1_KQ956825.1 SEQF8002.1_01059 open 1602 [NA] 533 [AA] 21876-23477 sdaA L-serine dehydratase 1
1010 SEQF8002.1_KQ956825.1 SEQF8002.1_01060 open 408 [NA] 135 [AA] 23747-24154 fkbP FK506-binding protein
1011 SEQF8002.1_KQ956825.1 SEQF8002.1_01061 open 480 [NA] 159 [AA] 24204-24683 greA Transcription elongation factor GreA
1012 SEQF8002.1_KQ956825.1 SEQF8002.1_01062 open 723 [NA] 240 [AA] 24876-25598 lexA LexA repressor
1013 SEQF8002.1_KQ956825.1 SEQF8002.1_01063 open 363 [NA] 120 [AA] 25758-26120 yneA Cell division suppressor protein YneA
1014 SEQF8002.1_KQ956825.1 SEQF8002.1_01064 open 204 [NA] 67 [AA] 26159-26362 hypothetical protein
1015 SEQF8002.1_KQ956825.1 SEQF8002.1_01065 open 447 [NA] 148 [AA] 26414-26860 nrdR Transcriptional repressor NrdR
1016 SEQF8002.1_KQ956825.1 SEQF8002.1_01066 open 2277 [NA] 758 [AA] 27088-29364 hypothetical protein
1017 SEQF8002.1_KQ956825.1 SEQF8002.1_01067 open 783 [NA] 260 [AA] 29563-30345 mraZ Transcriptional regulator MraZ
1018 SEQF8002.1_KQ956825.1 SEQF8002.1_01068 open 1071 [NA] 356 [AA] 30342-31412 rsmH Ribosomal RNA small subunit methyltransferase H
1019 SEQF8002.1_KQ956825.1 SEQF8002.1_01069 open 657 [NA] 218 [AA] 31412-32068 hypothetical protein
1020 SEQF8002.1_KQ956825.1 SEQF8002.1_01070 open 2052 [NA] 683 [AA] 32068-34119 pbpB Penicillin-binding protein PbpB
1021 SEQF8002.1_KQ956825.1 SEQF8002.1_01071 open 1212 [NA] 403 [AA] 34146-35357 hypothetical protein
1022 SEQF8002.1_KQ956825.1 SEQF8002.1_01072 open 1803 [NA] 600 [AA] 35383-37185 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1023 SEQF8002.1_KQ956825.1 SEQF8002.1_01073 open 1104 [NA] 367 [AA] 37182-38285 mraY Phospho-N-acetylmuramoyl-pentapeptide-transferase
1024 SEQF8002.1_KQ956825.1 SEQF8002.1_01074 open 1569 [NA] 522 [AA] 38356-39924 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase
1025 SEQF8002.1_KQ956825.1 SEQF8002.1_01075 open 1377 [NA] 458 [AA] 39917-41293 ftsW peptidoglycan glycosyltransferase FtsW
1026 SEQF8002.1_KQ956825.1 SEQF8002.1_01076 open 1239 [NA] 412 [AA] 41440-42678 murG UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
1027 SEQF8002.1_KQ956825.1 SEQF8002.1_01077 open 1494 [NA] 497 [AA] 42680-44173 murC UDP-N-acetylmuramate--L-alanine ligase
1028 SEQF8002.1_KQ956825.1 SEQF8002.1_01078 open 1116 [NA] 371 [AA] 44263-45378 ftsQ Cell division protein FtsQ
1029 SEQF8002.1_KQ956825.1 SEQF8002.1_01079 open 372 [NA] 123 [AA] 45639-46010 rpsL 30S ribosomal protein S12
1030 SEQF8002.1_KQ956825.1 SEQF8002.1_01080 open 471 [NA] 156 [AA] 46014-46484 rpsG 30S ribosomal protein S7
1031 SEQF8002.1_KQ956825.1 SEQF8002.1_01081 open 2130 [NA] 709 [AA] 46527-48656 fusA Elongation factor G
1032 SEQF8002.1_KQ956825.1 SEQF8002.1_01082 open 1200 [NA] 399 [AA] 48827-50026 tuf Elongation factor Tu
1033 SEQF8002.1_KQ956825.1 SEQF8002.1_01084 open 1230 [NA] 409 [AA] 52984-54213 xseA Exodeoxyribonuclease 7 large subunit
1034 SEQF8002.1_KQ956825.1 SEQF8002.1_01085 open 309 [NA] 102 [AA] 54276-54584 xseB Exodeoxyribonuclease 7 small subunit
1035 SEQF8002.1_KQ956825.1 SEQF8002.1_01087 open 303 [NA] 100 [AA] 54796-55098 hypothetical protein
1036 SEQF8002.1_KQ956825.1 SEQF8002.1_01088 open 306 [NA] 101 [AA] 55095-55400 hypothetical protein
1037 SEQF8002.1_KQ956825.1 SEQF8002.1_01089 open 3399 [NA] 1132 [AA] 55664-59062 ileS Isoleucine--tRNA ligase
1038 SEQF8002.1_KQ956825.1 SEQF8002.1_01090 open 888 [NA] 295 [AA] 59287-60174 dppC Dipeptide transport system permease protein DppC
1039 SEQF8002.1_KQ956825.1 SEQF8002.1_01091 open 1008 [NA] 335 [AA] 60171-61178 dppB Dipeptide transport system permease protein DppB
1040 SEQF8002.1_KQ956825.1 SEQF8002.1_01092 open 1749 [NA] 582 [AA] 61321-63069 appA Oligopeptide-binding protein AppA
1041 SEQF8002.1_KQ956825.1 SEQF8002.1_01093 open 1623 [NA] 540 [AA] 63086-64708 gsiA Glutathione import ATP-binding protein GsiA
1042 SEQF8002.1_KQ956825.1 SEQF8002.1_01094 open 777 [NA] 258 [AA] 64761-65537 yrpC Glutamate racemase 2
1043 SEQF8002.1_KQ956825.1 SEQF8002.1_01095 open 636 [NA] 211 [AA] 65587-66222 hypothetical protein
1044 SEQF8002.1_KQ956825.1 SEQF8002.1_01096 open 888 [NA] 295 [AA] 66303-67190 yciV 5-3 exoribonuclease
1045 SEQF8002.1_KQ956825.1 SEQF8002.1_01097 open 225 [NA] 74 [AA] 67210-67434 hypothetical protein
1046 SEQF8002.1_KQ956825.1 SEQF8002.1_01098 open 1563 [NA] 520 [AA] 67444-69006 hypothetical protein
1047 SEQF8002.1_KQ956825.1 SEQF8002.1_01099 open 1653 [NA] 550 [AA] 69157-70809 uvrD2 ATP-dependent DNA helicase UvrD2
1048 SEQF8002.1_KQ956825.1 SEQF8002.1_01100 open 1611 [NA] 536 [AA] 70889-72499 hypothetical protein
1049 SEQF8002.1_KQ956825.1 SEQF8002.1_01102 open 1401 [NA] 466 [AA] 73882-75282 hypothetical protein
1050 SEQF8002.1_KQ956825.1 SEQF8002.1_01103 open 753 [NA] 250 [AA] 75338-76090 recO DNA repair protein RecO
1051 SEQF8002.1_KQ956825.1 SEQF8002.1_01105 open 621 [NA] 206 [AA] 76319-76939 hypothetical protein
1052 SEQF8002.1_KQ956825.1 SEQF8002.1_01106 open 924 [NA] 307 [AA] 77032-77955 hypothetical protein
1053 SEQF8002.1_KQ956825.1 SEQF8002.1_01107 open 1206 [NA] 401 [AA] 78090-79295 thrB_2 Homoserine kinase
1054 SEQF8002.1_KQ956825.1 SEQF8002.1_01108 open 795 [NA] 264 [AA] 79389-80183 Trans%2Cpolycis-polyprenyl diphosphate synthase ((2Z%2C6E)-farnesyl diphosphate specific)
1055 SEQF8002.1_KQ956825.1 SEQF8002.1_01109 open 378 [NA] 125 [AA] 80217-80594 hypothetical protein
1056 SEQF8002.1_KQ956825.1 SEQF8002.1_01110 open 1521 [NA] 506 [AA] 80749-82269 glyQS Glycine--tRNA ligase
1057 SEQF8002.1_KQ956825.1 SEQF8002.1_01111 open 1155 [NA] 384 [AA] 82381-83535 dus putative tRNA-dihydrouridine synthase
1058 SEQF8002.1_KQ956825.1 SEQF8002.1_01112 open 1209 [NA] 402 [AA] 83763-84971 ftsZ Cell division protein FtsZ
1059 SEQF8002.1_KQ956825.1 SEQF8002.1_01113 open 465 [NA] 154 [AA] 84996-85460 sepF Cell division protein SepF
1060 SEQF8002.1_KQ956825.1 SEQF8002.1_01114 open 294 [NA] 97 [AA] 85647-85940 hypothetical protein
1061 SEQF8002.1_KQ956825.1 SEQF8002.1_01115 open 1314 [NA] 437 [AA] 86114-87427 hypothetical protein
1062 SEQF8002.1_KQ956825.1 SEQF8002.1_01116 open 495 [NA] 164 [AA] 87476-87970 lspA Lipoprotein signal peptidase
1063 SEQF8002.1_KQ956825.1 SEQF8002.1_01117 open 939 [NA] 312 [AA] 87963-88901 putative RNA pseudouridine synthase
1064 SEQF8002.1_KQ956825.1 SEQF8002.1_01118 open 3552 [NA] 1183 [AA] 88954-92505 dnaE1 DNA polymerase III subunit alpha
1065 SEQF8002.1_KQ956825.1 SEQF8002.1_01119 open 693 [NA] 230 [AA] 92592-93284 hypothetical protein
1066 SEQF8002.1_KQ956825.1 SEQF8002.1_01120 open 1338 [NA] 445 [AA] 93441-94778 glnA Glutamine synthetase
1067 SEQF8002.1_KQ956825.1 SEQF8002.1_01121 open 957 [NA] 318 [AA] 95185-96141 rihA Pyrimidine-specific ribonucleoside hydrolase RihA
1068 SEQF8002.1_KQ956825.1 SEQF8002.1_01122 open 1401 [NA] 466 [AA] 96270-97670 hypothetical protein
1069 SEQF8002.1_KQ956825.1 SEQF8002.1_01123 open 4059 [NA] 1352 [AA] 97768-101826 hypothetical protein
1070 SEQF8002.1_KQ956825.1 SEQF8002.1_01124 open 702 [NA] 233 [AA] 101875-102576 rsmC Ribosomal RNA small subunit methyltransferase C
1071 SEQF8002.1_KQ956825.1 SEQF8002.1_01125 open 1515 [NA] 504 [AA] 102697-104211 hflX GTPase HflX
1072 SEQF8002.1_KQ956825.1 SEQF8002.1_01126 open 963 [NA] 320 [AA] 104343-105305 ldh2 L-lactate dehydrogenase 2
1073 SEQF8002.1_KQ956825.1 SEQF8002.1_01127 open 1347 [NA] 448 [AA] 105465-106811 csd putative cysteine desulfurase
1074 SEQF8002.1_KQ956825.1 SEQF8002.1_01128 open 648 [NA] 215 [AA] 106839-107486 sufU Zinc-dependent sulfurtransferase SufU
1075 SEQF8002.1_KQ956825.1 SEQF8002.1_01129 open 432 [NA] 143 [AA] 107540-107971 hypothetical protein
1076 SEQF8002.1_KQ956825.1 SEQF8002.1_01130 open 681 [NA] 226 [AA] 107985-108665 hypothetical protein
1077 SEQF8002.1_KQ956825.1 SEQF8002.1_01131 open 645 [NA] 214 [AA] 108691-109335 hypothetical protein
1078 SEQF8002.1_KQ956825.1 SEQF8002.1_01132 open 2097 [NA] 698 [AA] 109335-111431 hypothetical protein
1079 SEQF8002.1_KQ956825.1 SEQF8002.1_01133 open 2307 [NA] 768 [AA] 111706-114012 hypothetical protein
1080 SEQF8002.1_KQ956825.1 SEQF8002.1_01135 open 1677 [NA] 558 [AA] 114350-116026 lysS1 Lysine--tRNA ligase 1
1081 SEQF8002.1_KQ956825.1 SEQF8002.1_01136 open 741 [NA] 246 [AA] 116085-116825 gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
1082 SEQF8002.1_KQ956825.1 SEQF8002.1_01137 open 681 [NA] 226 [AA] 116934-117614 phoU1 Phosphate-specific transport system accessory protein PhoU
1083 SEQF8002.1_KQ956825.1 SEQF8002.1_01138 open 1452 [NA] 483 [AA] 117772-119223 sasA_3 Adaptive-response sensory-kinase SasA
1084 SEQF8002.1_KQ956825.1 SEQF8002.1_01139 open 267 [NA] 88 [AA] 119234-119500 hypothetical protein
1085 SEQF8002.1_KQ956825.1 SEQF8002.1_01140 open 996 [NA] 331 [AA] 119637-120632 hypothetical protein
1086 SEQF8002.1_KQ956825.1 SEQF8002.1_01141 open 726 [NA] 241 [AA] 120771-121496 hypothetical protein
1087 SEQF8002.1_KQ956825.1 SEQF8002.1_01142 open 1044 [NA] 347 [AA] 121640-122683 Universal stress proteinMSMEI_3859
1088 SEQF8002.1_KQ956825.1 SEQF8002.1_01143 open 1239 [NA] 412 [AA] 122778-124016 mgs Alpha-monoglucosyldiacylglycerol synthase
1089 SEQF8002.1_KQ956825.1 SEQF8002.1_01144 open 420 [NA] 139 [AA] 124182-124601 putative protein
1090 SEQF8002.1_KQ956825.1 SEQF8002.1_01145 open 873 [NA] 290 [AA] 124711-125583 thyA Thymidylate synthase
1091 SEQF8002.1_KQ956825.1 SEQF8002.1_01146 open 654 [NA] 217 [AA] 125639-126292 hypothetical protein
1092 SEQF8002.1_KQ956825.1 SEQF8002.1_01147 open 546 [NA] 181 [AA] 126311-126856 ptpA putative low molecular weight protein-tyrosine-phosphatase
1093 SEQF8002.1_KQ956825.1 SEQF8002.1_01148 open 786 [NA] 261 [AA] 126863-127648 putative protein
1094 SEQF8002.1_KQ956825.1 SEQF8002.1_01149 open 657 [NA] 218 [AA] 127796-128452 putative protein
1095 SEQF8002.1_KQ956825.1 SEQF8002.1_01150 open 1368 [NA] 455 [AA] 128605-129972 dapE Succinyl-diaminopimelate desuccinylase
1096 SEQF8002.1_KQ956825.1 SEQF8002.1_01152 open 2679 [NA] 892 [AA] 130190-132868 btuD_12 Vitamin B12 import ATP-binding protein BtuD
1097 SEQF8002.1_KQ956825.1 SEQF8002.1_01154 open 90 [NA] 29 [AA] 133273-133362 hypothetical protein
1098 SEQF8002.1_KQ956825.1 SEQF8002.1_01155 open 639 [NA] 212 [AA] 133568-134206 hypothetical protein
1099 SEQF8002.1_KQ956825.1 SEQF8002.1_01156 open 1839 [NA] 612 [AA] 134319-136157 ykoD Putative HMPthiamine import ATP-binding protein YkoD
1100 SEQF8002.1_KQ956825.1 SEQF8002.1_01157 open 774 [NA] 257 [AA] 136173-136946 ecfT_3 Energy-coupling factor transporter transmembrane protein EcfT
1101 SEQF8002.1_KQ956825.1 SEQF8002.1_01158 open 1101 [NA] 366 [AA] 137004-138104 menA 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase
1102 SEQF8002.1_KQ956825.1 SEQF8002.1_01159 open 789 [NA] 262 [AA] 138318-139106 pdtaR putative transcriptional regulatory protein pdtaR
1103 SEQF8002.1_KQ956825.1 SEQF8002.1_01160 open 3009 [NA] 1002 [AA] 139210-142218 xni Flap endonuclease Xni
1104 SEQF8002.1_KQ956825.1 SEQF8002.1_01161 open 858 [NA] 285 [AA] 142326-143183 hypothetical protein
1105 SEQF8002.1_KQ956825.1 SEQF8002.1_01163 open 1968 [NA] 655 [AA] 143461-145428 sdhA Succinate dehydrogenase flavoprotein subunit
1106 SEQF8002.1_KQ956825.1 SEQF8002.1_01164 open 1515 [NA] 504 [AA] 145470-146984 hypothetical protein
1107 SEQF8002.1_KQ956825.1 SEQF8002.1_01165 open 1701 [NA] 566 [AA] 146981-148681 comM Competence protein ComM
1108 SEQF8002.1_KQ956825.1 SEQF8002.1_01166 open 453 [NA] 150 [AA] 148681-149133 hypothetical protein
1109 SEQF8002.1_KQ956825.1 SEQF8002.1_01167 open 2124 [NA] 707 [AA] 149359-151482 glgX Glycogen operon protein GlgX
1110 SEQF8002.1_KQ956825.1 SEQF8002.1_01168 open 1065 [NA] 354 [AA] 151580-152644 hypothetical protein
1111 SEQF8002.1_KQ956825.1 SEQF8002.1_01170 open 1386 [NA] 461 [AA] 152900-154285 aroA 3-phosphoshikimate 1-carboxyvinyltransferase
1112 SEQF8002.1_KQ956825.1 SEQF8002.1_01171 open 1230 [NA] 409 [AA] 154386-155615 ackA Acetate kinase
1113 SEQF8002.1_KQ956825.1 SEQF8002.1_01172 open 1659 [NA] 552 [AA] 155746-157404 hypothetical protein
1114 SEQF8002.1_KQ956825.1 SEQF8002.1_01173 open 2478 [NA] 825 [AA] 157690-160167 xfp Xylulose-5-phosphatefructose-6-phosphate phosphoketolase
1115 SEQF8002.1_KQ956825.1 SEQF8002.1_01174 open 1563 [NA] 520 [AA] 160554-162116 guaA GMP synthase [glutamine-hydrolyzing]
1116 SEQF8002.1_KQ956825.1 SEQF8002.1_01176 open 1617 [NA] 538 [AA] 162406-164022 hypothetical protein
1117 SEQF8002.1_KQ956825.1 SEQF8002.1_01177 open 1719 [NA] 572 [AA] 164292-166010 hypothetical protein
1118 SEQF8002.1_KQ956825.1 SEQF8002.1_01179 open 399 [NA] 132 [AA] 166431-166829 hypothetical protein
1119 SEQF8002.1_KQ956825.1 SEQF8002.1_01180 open 1191 [NA] 396 [AA] 167349-168539 hypothetical protein
1120 SEQF8002.1_KQ956825.1 SEQF8002.1_01181 open 552 [NA] 183 [AA] 169051-169602 hypothetical protein
1121 SEQF8002.1_KQ956825.1 SEQF8002.1_01182 open 501 [NA] 166 [AA] 169602-170102 hypothetical protein
1122 SEQF8002.1_KQ956825.1 SEQF8002.1_01183 open 2259 [NA] 752 [AA] 170406-172664 hypothetical protein
1123 SEQF8002.1_KQ956825.1 SEQF8002.1_01184 open 171 [NA] 56 [AA] 172948-173118 hypothetical protein
1124 SEQF8002.1_KQ956825.1 SEQF8002.1_01185 open 276 [NA] 91 [AA] 174316-174591 xerD Tyrosine recombinase XerD
1125 SEQF8002.1_KQ956825.1 SEQF8002.1_01186 open 840 [NA] 279 [AA] 174678-175517 putative protein
1126 SEQF8002.1_KQ956825.1 SEQF8002.1_01187 open 1428 [NA] 475 [AA] 175739-177166 mvaS Hydroxymethylglutaryl-CoA synthase
1127 SEQF8002.1_KQ956825.1 SEQF8002.1_01188 open 486 [NA] 161 [AA] 177322-177807 mvaA 3-hydroxy-3-methylglutaryl-coenzyme A reductase