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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Caldilinea aerophila DSM 14535 (SEQF2717.1)
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PROKKA Annotation for SEQF2717.1
Genome selected: Caldilinea aerophila DSM 14535
Contigs:1 Bases:5144873 bps
CDS:4129 rRNA:6
tmRNA:1 tRNA:48
Annotation Table [page:9]
Number of Records Found: 4129 [9 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
4001 SEQF2717.1_AP012337.1 SEQF2717.1_04074 open 744 [NA] 247 [AA] 5000579-5001322 hypothetical protein
4002 SEQF2717.1_AP012337.1 SEQF2717.1_04075 open 2154 [NA] 717 [AA] 5001678-5003831 hypothetical protein
4003 SEQF2717.1_AP012337.1 SEQF2717.1_04076 open 729 [NA] 242 [AA] 5004229-5004957 ttrB Tetrathionate reductase subunit B
4004 SEQF2717.1_AP012337.1 SEQF2717.1_04077 open 1170 [NA] 389 [AA] 5004971-5006140 hypothetical protein
4005 SEQF2717.1_AP012337.1 SEQF2717.1_04078 open 3309 [NA] 1102 [AA] 5006155-5009463 ttrA Tetrathionate reductase subunit A
4006 SEQF2717.1_AP012337.1 SEQF2717.1_04079 open 375 [NA] 124 [AA] 5009528-5009902 hypothetical protein
4007 SEQF2717.1_AP012337.1 SEQF2717.1_04080 open 633 [NA] 210 [AA] 5010007-5010639 hypothetical protein
4008 SEQF2717.1_AP012337.1 SEQF2717.1_04081 open 1230 [NA] 409 [AA] 5010652-5011881 ndhI_3 NAD(P)H-quinone oxidoreductase subunit I%2C chloroplastic
4009 SEQF2717.1_AP012337.1 SEQF2717.1_04082 open 378 [NA] 125 [AA] 5012146-5012523 dksA RNA polymerase-binding transcription factor DksA
4010 SEQF2717.1_AP012337.1 SEQF2717.1_04083 open 648 [NA] 215 [AA] 5012535-5013182 upp Uracil phosphoribosyltransferase
4011 SEQF2717.1_AP012337.1 SEQF2717.1_04084 open 744 [NA] 247 [AA] 5013419-5014162 trmJ tRNA (cytidineuridine-2-O-)-methyltransferase TrmJ
4012 SEQF2717.1_AP012337.1 SEQF2717.1_04085 open 543 [NA] 180 [AA] 5014174-5014716 hypothetical protein
4013 SEQF2717.1_AP012337.1 SEQF2717.1_04086 open 1998 [NA] 665 [AA] 5014760-5016757 ccmF Cytochrome c-type biogenesis protein CcmF
4014 SEQF2717.1_AP012337.1 SEQF2717.1_04087 open 609 [NA] 202 [AA] 5017063-5017671 resA_4 Thiol-disulfide oxidoreductase ResA
4015 SEQF2717.1_AP012337.1 SEQF2717.1_04088 open 555 [NA] 184 [AA] 5017664-5018218 hypothetical protein
4016 SEQF2717.1_AP012337.1 SEQF2717.1_04089 open 1014 [NA] 337 [AA] 5018531-5019544 hypothetical protein
4017 SEQF2717.1_AP012337.1 SEQF2717.1_04090 open 804 [NA] 267 [AA] 5019541-5020344 modA Molybdate-binding protein ModA
4018 SEQF2717.1_AP012337.1 SEQF2717.1_04091 open 660 [NA] 219 [AA] 5020359-5021018 modB Molybdenum transport system permease protein ModB
4019 SEQF2717.1_AP012337.1 SEQF2717.1_04092 open 351 [NA] 116 [AA] 5020999-5021349 hypothetical protein
4020 SEQF2717.1_AP012337.1 SEQF2717.1_04093 open 120 [NA] 39 [AA] 5021352-5021471 hypothetical protein
4021 SEQF2717.1_AP012337.1 SEQF2717.1_04094 open 1197 [NA] 398 [AA] 5021592-5022788 hypothetical protein
4022 SEQF2717.1_AP012337.1 SEQF2717.1_04095 open 993 [NA] 330 [AA] 5022875-5023867 lsrD_2 Autoinducer 2 import system permease protein LsrD
4023 SEQF2717.1_AP012337.1 SEQF2717.1_04096 open 1062 [NA] 353 [AA] 5023857-5024918 lsrC Autoinducer 2 import system permease protein LsrC
4024 SEQF2717.1_AP012337.1 SEQF2717.1_04097 open 1575 [NA] 524 [AA] 5024915-5026489 mglA_4 Galactosemethyl galactoside import ATP-binding protein MglA
4025 SEQF2717.1_AP012337.1 SEQF2717.1_04098 open 1245 [NA] 414 [AA] 5026568-5027812 hypothetical protein
4026 SEQF2717.1_AP012337.1 SEQF2717.1_04099 open 1812 [NA] 603 [AA] 5028178-5029989 pepF1 Oligoendopeptidase F%2C plasmid
4027 SEQF2717.1_AP012337.1 SEQF2717.1_04100 open 996 [NA] 331 [AA] 5029992-5030987 gloB_4 Hydroxyacylglutathione hydrolase
4028 SEQF2717.1_AP012337.1 SEQF2717.1_04101 open 579 [NA] 192 [AA] 5031273-5031851 hypothetical protein
4029 SEQF2717.1_AP012337.1 SEQF2717.1_04102 open 1077 [NA] 358 [AA] 5031870-5032946 thyX Flavin-dependent thymidylate synthase
4030 SEQF2717.1_AP012337.1 SEQF2717.1_04103 open 510 [NA] 169 [AA] 5033132-5033641 hypothetical protein
4031 SEQF2717.1_AP012337.1 SEQF2717.1_04104 open 324 [NA] 107 [AA] 5033638-5033961 hypothetical protein
4032 SEQF2717.1_AP012337.1 SEQF2717.1_04105 open 312 [NA] 103 [AA] 5034102-5034413 epsN_1 Putative pyridoxal phosphate-dependent aminotransferase EpsN
4033 SEQF2717.1_AP012337.1 SEQF2717.1_04106 open 132 [NA] 43 [AA] 5035202-5035333 hypothetical protein
4034 SEQF2717.1_AP012337.1 SEQF2717.1_04107 open 468 [NA] 155 [AA] 5035330-5035797 hypothetical protein
4035 SEQF2717.1_AP012337.1 SEQF2717.1_04108 open 387 [NA] 128 [AA] 5036125-5036511 hypothetical protein
4036 SEQF2717.1_AP012337.1 SEQF2717.1_04109 open 237 [NA] 78 [AA] 5036508-5036744 hypothetical protein
4037 SEQF2717.1_AP012337.1 SEQF2717.1_04110 open 1275 [NA] 424 [AA] 5036959-5038233 hypothetical protein
4038 SEQF2717.1_AP012337.1 SEQF2717.1_04111 open 1995 [NA] 664 [AA] 5038296-5040290 pglF UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
4039 SEQF2717.1_AP012337.1 SEQF2717.1_04112 open 444 [NA] 147 [AA] 5040463-5040906 epsN_2 Putative pyridoxal phosphate-dependent aminotransferase EpsN
4040 SEQF2717.1_AP012337.1 SEQF2717.1_04113 open 639 [NA] 212 [AA] 5041129-5041767 wecA UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase
4041 SEQF2717.1_AP012337.1 SEQF2717.1_04114 open 1122 [NA] 373 [AA] 5041721-5042842 arnB UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
4042 SEQF2717.1_AP012337.1 SEQF2717.1_04115 open 729 [NA] 242 [AA] 5042956-5043684 COQ5_6 2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase%2C mitochondrial
4043 SEQF2717.1_AP012337.1 SEQF2717.1_04116 open 1029 [NA] 342 [AA] 5043720-5044748 hypothetical protein
4044 SEQF2717.1_AP012337.1 SEQF2717.1_04117 open 1026 [NA] 341 [AA] 5044758-5045783 hypothetical protein
4045 SEQF2717.1_AP012337.1 SEQF2717.1_04118 open 1422 [NA] 473 [AA] 5045827-5047248 hypothetical protein
4046 SEQF2717.1_AP012337.1 SEQF2717.1_04119 open 876 [NA] 291 [AA] 5047252-5048127 cpoB_2 Cell division coordinator CpoB
4047 SEQF2717.1_AP012337.1 SEQF2717.1_04120 open 1116 [NA] 371 [AA] 5048246-5049361 hypothetical protein
4048 SEQF2717.1_AP012337.1 SEQF2717.1_04121 open 1497 [NA] 498 [AA] 5049407-5050903 hypothetical protein
4049 SEQF2717.1_AP012337.1 SEQF2717.1_04122 open 90 [NA] 29 [AA] 5051490-5051579 hypothetical protein
4050 SEQF2717.1_AP012337.1 SEQF2717.1_04123 open 1206 [NA] 401 [AA] 5052613-5053818 desV dTDP-3-amino-3%2C4%2C6-trideoxy-alpha-D-glucose transaminase
4051 SEQF2717.1_AP012337.1 SEQF2717.1_04124 open 633 [NA] 210 [AA] 5053937-5054569 wbpD UDP-2-acetamido-3-amino-2%2C3-dideoxy-D-glucuronate N-acetyltransferase
4052 SEQF2717.1_AP012337.1 SEQF2717.1_04125 open 1023 [NA] 340 [AA] 5054644-5055666 iolG_24 Inositol 2-dehydrogenaseD-chiro-inositol 3-dehydrogenase
4053 SEQF2717.1_AP012337.1 SEQF2717.1_04126 open 891 [NA] 296 [AA] 5055860-5056750 hypothetical protein
4054 SEQF2717.1_AP012337.1 SEQF2717.1_04127 open 423 [NA] 140 [AA] 5056942-5057364 hypothetical protein
4055 SEQF2717.1_AP012337.1 SEQF2717.1_04128 open 324 [NA] 107 [AA] 5057351-5057674 hypothetical protein
4056 SEQF2717.1_AP012337.1 SEQF2717.1_04129 open 1395 [NA] 464 [AA] 5058239-5059633 hypothetical protein
4057 SEQF2717.1_AP012337.1 SEQF2717.1_04130 open 960 [NA] 319 [AA] 5059651-5060610 ctaA Heme A synthase
4058 SEQF2717.1_AP012337.1 SEQF2717.1_04131 open 1722 [NA] 573 [AA] 5060929-5062650 hypothetical protein
4059 SEQF2717.1_AP012337.1 SEQF2717.1_04132 open 624 [NA] 207 [AA] 5062697-5063320 hypothetical protein
4060 SEQF2717.1_AP012337.1 SEQF2717.1_04133 open 765 [NA] 254 [AA] 5064057-5064821 putative protein
4061 SEQF2717.1_AP012337.1 SEQF2717.1_04134 open 378 [NA] 125 [AA] 5064934-5065311 hypothetical protein
4062 SEQF2717.1_AP012337.1 SEQF2717.1_04135 open 1347 [NA] 448 [AA] 5065811-5067157 spuC Putrescine--pyruvate aminotransferase
4063 SEQF2717.1_AP012337.1 SEQF2717.1_04136 open 2694 [NA] 897 [AA] 5067287-5069980 pacL_2 Calcium-transporting ATPase
4064 SEQF2717.1_AP012337.1 SEQF2717.1_04137 open 1026 [NA] 341 [AA] 5070215-5071240 lacD1 Tagatose 1%2C6-diphosphate aldolase 1
4065 SEQF2717.1_AP012337.1 SEQF2717.1_04138 open 1302 [NA] 433 [AA] 5071399-5072700 hypothetical protein
4066 SEQF2717.1_AP012337.1 SEQF2717.1_04139 open 234 [NA] 77 [AA] 5073004-5073237 hypothetical protein
4067 SEQF2717.1_AP012337.1 SEQF2717.1_04140 open 1416 [NA] 471 [AA] 5073341-5074756 hypothetical protein
4068 SEQF2717.1_AP012337.1 SEQF2717.1_04141 open 423 [NA] 140 [AA] 5074773-5075195 hypothetical protein
4069 SEQF2717.1_AP012337.1 SEQF2717.1_04142 open 1344 [NA] 447 [AA] 5075484-5076827 pqqE_2 PqqA peptide cyclase
4070 SEQF2717.1_AP012337.1 SEQF2717.1_04143 open 1149 [NA] 382 [AA] 5076860-5078008 acr3 Arsenical-resistance protein Acr3
4071 SEQF2717.1_AP012337.1 SEQF2717.1_04144 open 384 [NA] 127 [AA] 5078192-5078575 hypothetical protein
4072 SEQF2717.1_AP012337.1 SEQF2717.1_04145 open 948 [NA] 315 [AA] 5078775-5079722 hypothetical protein
4073 SEQF2717.1_AP012337.1 SEQF2717.1_04146 open 642 [NA] 213 [AA] 5079751-5080392 kdgA KHGKDPG aldolase
4074 SEQF2717.1_AP012337.1 SEQF2717.1_04147 open 969 [NA] 322 [AA] 5080419-5081387 Formate dehydrogenase%2C mitochondrial
4075 SEQF2717.1_AP012337.1 SEQF2717.1_04148 open 588 [NA] 195 [AA] 5081384-5081971 pgiA_2 Glucose-6-phosphate isomerase
4076 SEQF2717.1_AP012337.1 SEQF2717.1_04149 open 813 [NA] 270 [AA] 5082013-5082825 nagR_4 HTH-type transcriptional repressor NagR
4077 SEQF2717.1_AP012337.1 SEQF2717.1_04150 open 1524 [NA] 507 [AA] 5082886-5084409 xylB_17 Xylulose kinase
4078 SEQF2717.1_AP012337.1 SEQF2717.1_04151 open 861 [NA] 286 [AA] 5084425-5085285 ycjP_5 Inner membrane ABC transporter permease protein YcjP
4079 SEQF2717.1_AP012337.1 SEQF2717.1_04152 open 1002 [NA] 333 [AA] 5085298-5086299 melD_11 Melibioseraffinosestachyose import permease protein MelD
4080 SEQF2717.1_AP012337.1 SEQF2717.1_04153 open 1518 [NA] 505 [AA] 5086471-5087988 hypothetical protein
4081 SEQF2717.1_AP012337.1 SEQF2717.1_04154 open 210 [NA] 69 [AA] 5088346-5088555 hypothetical protein
4082 SEQF2717.1_AP012337.1 SEQF2717.1_04155 open 1545 [NA] 514 [AA] 5088559-5090103 hypothetical protein
4083 SEQF2717.1_AP012337.1 SEQF2717.1_04156 open 525 [NA] 174 [AA] 5090119-5090643 hypothetical protein
4084 SEQF2717.1_AP012337.1 SEQF2717.1_04157 open 729 [NA] 242 [AA] 5090694-5091422 hypothetical protein
4085 SEQF2717.1_AP012337.1 SEQF2717.1_04158 open 966 [NA] 321 [AA] 5091427-5092392 hypothetical protein
4086 SEQF2717.1_AP012337.1 SEQF2717.1_04159 open 1362 [NA] 453 [AA] 5092389-5093750 hypothetical protein
4087 SEQF2717.1_AP012337.1 SEQF2717.1_04160 open 1986 [NA] 661 [AA] 5093779-5095764 ftsH_4 ATP-dependent zinc metalloprotease FtsH
4088 SEQF2717.1_AP012337.1 SEQF2717.1_04161 open 291 [NA] 96 [AA] 5095755-5096045 hypothetical protein
4089 SEQF2717.1_AP012337.1 SEQF2717.1_04162 open 2043 [NA] 680 [AA] 5096042-5098084 hypothetical protein
4090 SEQF2717.1_AP012337.1 SEQF2717.1_04163 open 651 [NA] 216 [AA] 5098117-5098767 hypothetical protein
4091 SEQF2717.1_AP012337.1 SEQF2717.1_04164 open 291 [NA] 96 [AA] 5098888-5099178 hypothetical protein
4092 SEQF2717.1_AP012337.1 SEQF2717.1_04165 open 1146 [NA] 381 [AA] 5099180-5100325 hypothetical protein
4093 SEQF2717.1_AP012337.1 SEQF2717.1_04166 open 498 [NA] 165 [AA] 5100494-5100991 hypothetical protein
4094 SEQF2717.1_AP012337.1 SEQF2717.1_04167 open 321 [NA] 106 [AA] 5100991-5101311 hypothetical protein
4095 SEQF2717.1_AP012337.1 SEQF2717.1_04168 open 351 [NA] 116 [AA] 5101311-5101661 hypothetical protein
4096 SEQF2717.1_AP012337.1 SEQF2717.1_04169 open 2526 [NA] 841 [AA] 5101666-5104191 hypothetical protein
4097 SEQF2717.1_AP012337.1 SEQF2717.1_04170 open 2556 [NA] 851 [AA] 5104188-5106743 hypothetical protein
4098 SEQF2717.1_AP012337.1 SEQF2717.1_04171 open 2208 [NA] 735 [AA] 5106885-5109092 hypothetical protein
4099 SEQF2717.1_AP012337.1 SEQF2717.1_04172 open 3246 [NA] 1081 [AA] 5109127-5112372 hypothetical protein
4100 SEQF2717.1_AP012337.1 SEQF2717.1_04173 open 1170 [NA] 389 [AA] 5112400-5113569 hypothetical protein
4101 SEQF2717.1_AP012337.1 SEQF2717.1_04174 open 357 [NA] 118 [AA] 5113617-5113973 hypothetical protein
4102 SEQF2717.1_AP012337.1 SEQF2717.1_04175 open 876 [NA] 291 [AA] 5114010-5114885 tesE 2-hydroxyhexa-2%2C4-dienoate hydratase
4103 SEQF2717.1_AP012337.1 SEQF2717.1_04176 open 735 [NA] 244 [AA] 5114986-5115720 mhpD 2-keto-4-pentenoate hydratase
4104 SEQF2717.1_AP012337.1 SEQF2717.1_04177 open 849 [NA] 282 [AA] 5115750-5116598 todF_2 2-hydroxy-6-oxo-2%2C4-heptadienoate hydrolase
4105 SEQF2717.1_AP012337.1 SEQF2717.1_04178 open 501 [NA] 166 [AA] 5116896-5117396 nphA2 NADH-dependent flavin reductase
4106 SEQF2717.1_AP012337.1 SEQF2717.1_04179 open 1029 [NA] 342 [AA] 5117551-5118579 4-hydroxy-2-oxovalerate aldolase
4107 SEQF2717.1_AP012337.1 SEQF2717.1_04180 open 918 [NA] 305 [AA] 5118576-5119493 Acetaldehyde dehydrogenase
4108 SEQF2717.1_AP012337.1 SEQF2717.1_04181 open 819 [NA] 272 [AA] 5119433-5120251 xynR_3 HTH-type transcriptional regulator XynR
4109 SEQF2717.1_AP012337.1 SEQF2717.1_04182 open 975 [NA] 324 [AA] 5120624-5121598 bphC Manganese-dependent 2%2C3-dihydroxybiphenyl 1%2C2-dioxygenase
4110 SEQF2717.1_AP012337.1 SEQF2717.1_04183 open 1602 [NA] 533 [AA] 5121651-5123252 nphA1 4-nitrophenol 2-monooxygenase%2C oxygenase component
4111 SEQF2717.1_AP012337.1 SEQF2717.1_04184 open 528 [NA] 175 [AA] 5123766-5124293 rplI 50S ribosomal protein L9
4112 SEQF2717.1_AP012337.1 SEQF2717.1_04185 open 1413 [NA] 470 [AA] 5124485-5125897 hypothetical protein
4113 SEQF2717.1_AP012337.1 SEQF2717.1_04186 open 993 [NA] 330 [AA] 5125934-5126926 hypothetical protein
4114 SEQF2717.1_AP012337.1 SEQF2717.1_04187 open 2892 [NA] 963 [AA] 5126886-5129777 hypothetical protein
4115 SEQF2717.1_AP012337.1 SEQF2717.1_04188 open 1230 [NA] 409 [AA] 5129800-5131029 lysK [LysW]-lysine hydrolase
4116 SEQF2717.1_AP012337.1 SEQF2717.1_04189 open 1206 [NA] 401 [AA] 5131033-5132238 lysJ [LysW]-aminoadipate semialdehyde transaminase
4117 SEQF2717.1_AP012337.1 SEQF2717.1_04190 open 804 [NA] 267 [AA] 5132349-5133152 lysZ [LysW]-aminoadipate kinase
4118 SEQF2717.1_AP012337.1 SEQF2717.1_04191 open 1056 [NA] 351 [AA] 5133376-5134431 lysY [LysW]-L-2-aminoadipate 6-phosphate reductase
4119 SEQF2717.1_AP012337.1 SEQF2717.1_04192 open 726 [NA] 241 [AA] 5134711-5135436 kdpE Transcriptional regulatory protein KdpE
4120 SEQF2717.1_AP012337.1 SEQF2717.1_04193 open 876 [NA] 291 [AA] 5135683-5136558 hypothetical protein
4121 SEQF2717.1_AP012337.1 SEQF2717.1_04194 open 600 [NA] 199 [AA] 5136595-5137194 tsf Elongation factor Ts
4122 SEQF2717.1_AP012337.1 SEQF2717.1_04195 open 720 [NA] 239 [AA] 5137321-5138040 pyrH Uridylate kinase
4123 SEQF2717.1_AP012337.1 SEQF2717.1_04196 open 558 [NA] 185 [AA] 5138238-5138795 frr Ribosome-recycling factor
4124 SEQF2717.1_AP012337.1 SEQF2717.1_04197 open 750 [NA] 249 [AA] 5138815-5139564 uppS Isoprenyl transferase
4125 SEQF2717.1_AP012337.1 SEQF2717.1_04198 open 867 [NA] 288 [AA] 5139617-5140483 hypothetical protein
4126 SEQF2717.1_AP012337.1 SEQF2717.1_04199 open 681 [NA] 226 [AA] 5140490-5141170 rpe_3 Ribulose-phosphate 3-epimerase
4127 SEQF2717.1_AP012337.1 SEQF2717.1_04200 open 831 [NA] 276 [AA] 5141214-5142044 menH_3 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
4128 SEQF2717.1_AP012337.1 SEQF2717.1_04201 open 372 [NA] 123 [AA] 5142070-5142441 hypothetical protein
4129 SEQF2717.1_AP012337.1 SEQF2717.1_04202 open 1140 [NA] 379 [AA] 5142588-5143727 hypothetical protein