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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Schaalia lingnae F0379 (SEQF1948.2)
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PROKKA Annotation for SEQF1948.2
Genome selected: Schaalia lingnae F0379
Contigs:14 Bases:1901306 bps
CDS:1635 rRNA:3
tmRNA:1 tRNA:48
Annotation Table [page:4]
Number of Records Found: 1635 [4 Pages]
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# Molecule PID Genome
Viewer		 NA (Length)(Seq)
 AA (Length)(Seq)
 Range Gene Gene Product
1501 SEQF1948.2_KB291553.1 SEQF1948.2_01556 open 1011 [NA] 336 [AA] 672844-673854 hypothetical protein
1502 SEQF1948.2_KB291553.1 SEQF1948.2_01557 open 1221 [NA] 406 [AA] 673902-675122 aroC Chorismate synthase
1503 SEQF1948.2_KB291553.1 SEQF1948.2_01558 open 531 [NA] 176 [AA] 675119-675649 aroK_1 Shikimate kinase
1504 SEQF1948.2_KB291553.1 SEQF1948.2_01559 open 1089 [NA] 362 [AA] 675612-676700 aroB 3-dehydroquinate synthase
1505 SEQF1948.2_KB291553.1 SEQF1948.2_01560 open 564 [NA] 187 [AA] 676670-677233 aroK_2 Shikimate kinase
1506 SEQF1948.2_KB291553.1 SEQF1948.2_01561 open 564 [NA] 187 [AA] 677261-677824 efp Elongation factor P
1507 SEQF1948.2_KB291553.1 SEQF1948.2_01562 open 546 [NA] 181 [AA] 677827-678372 nusB Transcription antitermination protein NusB
1508 SEQF1948.2_KB291553.1 SEQF1948.2_01563 open 312 [NA] 103 [AA] 678814-679125 hypothetical protein
1509 SEQF1948.2_KB291553.1 SEQF1948.2_01564 open 558 [NA] 185 [AA] 679157-679714 gmk Guanylate kinase
1510 SEQF1948.2_KB291553.1 SEQF1948.2_01565 open 267 [NA] 88 [AA] 679752-680018 rpoZ DNA-directed RNA polymerase subunit omega
1511 SEQF1948.2_KB291553.1 SEQF1948.2_01566 open 1239 [NA] 412 [AA] 679996-681234 coaBC Coenzyme A biosynthesis bifunctional protein CoaBC
1512 SEQF1948.2_KB291553.1 SEQF1948.2_01567 open 1188 [NA] 395 [AA] 681240-682427 metK S-adenosylmethionine synthase
1513 SEQF1948.2_KB291553.1 SEQF1948.2_01568 open 603 [NA] 200 [AA] 682424-683026 hypothetical protein
1514 SEQF1948.2_KB291553.1 SEQF1948.2_01569 open 1962 [NA] 653 [AA] 683088-685049 priA putative primosomal protein N
1515 SEQF1948.2_KB291553.1 SEQF1948.2_01570 open 951 [NA] 316 [AA] 685065-686015 fmt Methionyl-tRNA formyltransferase
1516 SEQF1948.2_KB291553.1 SEQF1948.2_01571 open 1476 [NA] 491 [AA] 686015-687490 Putative methyltransferase
1517 SEQF1948.2_KB291553.1 SEQF1948.2_01572 open 666 [NA] 221 [AA] 687487-688152 rpe Ribulose-phosphate 3-epimerase
1518 SEQF1948.2_KB291553.1 SEQF1948.2_01574 open 771 [NA] 256 [AA] 688368-689138 ribX Riboflavin transport system permease protein RibX
1519 SEQF1948.2_KB291553.1 SEQF1948.2_01575 open 996 [NA] 331 [AA] 689164-690159 ribY Riboflavin-binding protein RibY
1520 SEQF1948.2_KB291553.1 SEQF1948.2_01576 open 261 [NA] 86 [AA] 690216-690476 hypothetical protein
1521 SEQF1948.2_KB291553.1 SEQF1948.2_01577 open 918 [NA] 305 [AA] 690623-691540 hypothetical protein
1522 SEQF1948.2_KB291553.1 SEQF1948.2_01578 open 975 [NA] 324 [AA] 691533-692507 hypothetical protein
1523 SEQF1948.2_KB291553.1 SEQF1948.2_01579 open 2736 [NA] 911 [AA] 692504-695239 helY putative helicase HelY
1524 SEQF1948.2_KB291553.1 SEQF1948.2_01580 open 1587 [NA] 528 [AA] 695224-696810 lnt Apolipoprotein N-acyltransferase
1525 SEQF1948.2_KB291553.1 SEQF1948.2_01581 open 759 [NA] 252 [AA] 696810-697568 Undecaprenyl-phosphate mannosyltransferase
1526 SEQF1948.2_KB291553.1 SEQF1948.2_01582 open 366 [NA] 121 [AA] 697639-698004 rbpA RNA polymerase-binding protein RbpA
1527 SEQF1948.2_KB291553.1 SEQF1948.2_01583 open 561 [NA] 186 [AA] 698227-698787 putative HTH-type transcriptional regulator
1528 SEQF1948.2_KB291553.1 SEQF1948.2_01584 open 759 [NA] 252 [AA] 698892-699650 putative HTH-type transcriptional regulator
1529 SEQF1948.2_KB291553.1 SEQF1948.2_01585 open 435 [NA] 144 [AA] 699647-700081 garA Glycogen accumulation regulator GarA
1530 SEQF1948.2_KB291553.1 SEQF1948.2_01586 open 798 [NA] 265 [AA] 700148-700945 hypothetical protein
1531 SEQF1948.2_KB291553.1 SEQF1948.2_01587 open 333 [NA] 110 [AA] 700948-701280 hypothetical protein
1532 SEQF1948.2_KB291553.1 SEQF1948.2_01588 open 831 [NA] 276 [AA] 701282-702112 hypothetical protein
1533 SEQF1948.2_KB291553.1 SEQF1948.2_01589 open 2580 [NA] 859 [AA] 702109-704688 pepN_2 Aminopeptidase N
1534 SEQF1948.2_KB291553.1 SEQF1948.2_01590 open 1602 [NA] 533 [AA] 704725-706326 murE_2 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
1535 SEQF1948.2_KB291553.1 SEQF1948.2_01591 open 1482 [NA] 493 [AA] 706364-707845 der GTPase Der
1536 SEQF1948.2_KB291553.1 SEQF1948.2_01592 open 2778 [NA] 925 [AA] 708099-710876 hypothetical protein
1537 SEQF1948.2_KB291553.1 SEQF1948.2_01594 open 741 [NA] 246 [AA] 711308-712048 cmk Cytidylate kinase
1538 SEQF1948.2_KB291553.1 SEQF1948.2_01595 open 1143 [NA] 380 [AA] 712024-713166 hypothetical protein
1539 SEQF1948.2_KB291553.1 SEQF1948.2_01596 open 750 [NA] 249 [AA] 713163-713912 putative RNA pseudouridine synthase
1540 SEQF1948.2_KB291553.1 SEQF1948.2_01597 open 582 [NA] 193 [AA] 713909-714490 scpB Segregation and condensation protein B
1541 SEQF1948.2_KB291553.1 SEQF1948.2_01598 open 795 [NA] 264 [AA] 714487-715281 scpA Segregation and condensation protein A
1542 SEQF1948.2_KB291553.1 SEQF1948.2_01599 open 867 [NA] 288 [AA] 715265-716131 putative protein
1543 SEQF1948.2_KB291553.1 SEQF1948.2_01600 open 957 [NA] 318 [AA] 716202-717158 xerD Tyrosine recombinase XerD
1544 SEQF1948.2_KB291553.1 SEQF1948.2_01601 open 2082 [NA] 693 [AA] 717287-719368 tkt Transketolase
1545 SEQF1948.2_KB291553.1 SEQF1948.2_01602 open 1017 [NA] 338 [AA] 719378-720394 hypothetical protein
1546 SEQF1948.2_KB291553.1 SEQF1948.2_01603 open 246 [NA] 81 [AA] 720479-720724 secG putative protein-export membrane protein SecG
1547 SEQF1948.2_KB291553.1 SEQF1948.2_01604 open 780 [NA] 259 [AA] 720844-721623 tpiA Triosephosphate isomerase
1548 SEQF1948.2_KB291553.1 SEQF1948.2_01605 open 1194 [NA] 397 [AA] 721627-722820 pgk Phosphoglycerate kinase
1549 SEQF1948.2_KB291553.1 SEQF1948.2_01606 open 1008 [NA] 335 [AA] 722928-723935 gap2 Glyceraldehyde-3-phosphate dehydrogenase 2
1550 SEQF1948.2_KB291553.1 SEQF1948.2_01607 open 984 [NA] 327 [AA] 724120-725103 whiA putative cell division protein WhiA
1551 SEQF1948.2_KB291553.1 SEQF1948.2_01608 open 1005 [NA] 334 [AA] 725145-726149 Putative gluconeogenesis factor
1552 SEQF1948.2_KB291553.1 SEQF1948.2_01609 open 957 [NA] 318 [AA] 726153-727109 Nucleotide-binding protein
1553 SEQF1948.2_KB291553.1 SEQF1948.2_01610 open 2013 [NA] 670 [AA] 727169-729181 uvrC UvrABC system protein C
1554 SEQF1948.2_KB291553.1 SEQF1948.2_01611 open 1425 [NA] 474 [AA] 729292-730716 glnA_1 Glutamine synthetase
1555 SEQF1948.2_KB291553.1 SEQF1948.2_01612 open 1860 [NA] 619 [AA] 730790-732649 Long-chain-fatty-acid--CoA ligase FadD15
1556 SEQF1948.2_KB291553.1 SEQF1948.2_01613 open 1914 [NA] 637 [AA] 732683-734596 Long-chain-fatty-acid--CoA ligase FadD15
1557 SEQF1948.2_KB291553.1 SEQF1948.2_01614 open 2865 [NA] 954 [AA] 734727-737591 uvrA UvrABC system protein A
1558 SEQF1948.2_KB291553.1 SEQF1948.2_01615 open 2412 [NA] 803 [AA] 737659-740070 ctpE Calcium-transporting ATPase CtpE
1559 SEQF1948.2_KB291553.1 SEQF1948.2_01616 open 1002 [NA] 333 [AA] 740067-741068 putative membrane protein
1560 SEQF1948.2_KB291553.1 SEQF1948.2_01617 open 915 [NA] 304 [AA] 741276-742190 hypothetical protein
1561 SEQF1948.2_KB291553.1 SEQF1948.2_01618 open 753 [NA] 250 [AA] 742166-742918 pcs Phosphatidylcholine synthase
1562 SEQF1948.2_KB291553.1 SEQF1948.2_01619 open 2109 [NA] 702 [AA] 743000-745108 uvrB UvrABC system protein B
1563 SEQF1948.2_KB291553.1 SEQF1948.2_01620 open 1776 [NA] 591 [AA] 745262-747037 hypothetical protein
1564 SEQF1948.2_KB291553.1 SEQF1948.2_01621 open 672 [NA] 223 [AA] 747312-747983 coaE Dephospho-CoA kinase
1565 SEQF1948.2_KB291553.1 SEQF1948.2_01622 open 1350 [NA] 449 [AA] 748081-749430 brnQ Branched-chain amino acid transport system 2 carrier protein
1566 SEQF1948.2_KB291553.1 SEQF1948.2_01623 open 1458 [NA] 485 [AA] 749662-751119 rpsA 30S ribosomal protein S1
1567 SEQF1948.2_KB291553.1 SEQF1948.2_01624 open 2712 [NA] 903 [AA] 751247-753958 polA DNA polymerase I
1568 SEQF1948.2_KB291553.1 SEQF1948.2_01625 open 420 [NA] 139 [AA] 753960-754379 Putative esterase
1569 SEQF1948.2_KB291553.1 SEQF1948.2_01626 open 591 [NA] 196 [AA] 754425-755015 pdtaR putative transcriptional regulatory protein pdtaR
1570 SEQF1948.2_KB291553.1 SEQF1948.2_01628 open 216 [NA] 71 [AA] 755340-755555 hypothetical protein
1571 SEQF1948.2_KB291553.1 SEQF1948.2_01629 open 1944 [NA] 647 [AA] 755704-757647 oatA O-acetyltransferase OatA
1572 SEQF1948.2_KB291553.1 SEQF1948.2_01630 open 1449 [NA] 482 [AA] 757719-759167 pyk Pyruvate kinase
1573 SEQF1948.2_KB291553.1 SEQF1948.2_01631 open 948 [NA] 315 [AA] 759177-760124 lgt Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase
1574 SEQF1948.2_KB291553.1 SEQF1948.2_01632 open 873 [NA] 290 [AA] 760173-761045 trpC Indole-3-glycerol phosphate synthase
1575 SEQF1948.2_KB291553.1 SEQF1948.2_01633 open 747 [NA] 248 [AA] 761120-761866 hypothetical protein
1576 SEQF1948.2_KB291553.1 SEQF1948.2_01634 open 849 [NA] 282 [AA] 761869-762717 aroE Shikimate dehydrogenase (NADP(+))
1577 SEQF1948.2_KB291553.1 SEQF1948.2_01635 open 1410 [NA] 469 [AA] 762717-764126 mltG Endolytic murein transglycosylase
1578 SEQF1948.2_KB291553.1 SEQF1948.2_01636 open 471 [NA] 156 [AA] 764126-764596 Putative pre-16S rRNA nuclease
1579 SEQF1948.2_KB291553.1 SEQF1948.2_01637 open 2709 [NA] 902 [AA] 764596-767304 alaS Alanine--tRNA ligase
1580 SEQF1948.2_KB291553.1 SEQF1948.2_01638 open 624 [NA] 207 [AA] 767409-768032 rpsD 30S ribosomal protein S4
1581 SEQF1948.2_KB291553.1 SEQF1948.2_01639 open 1377 [NA] 458 [AA] 768153-769529 putative AAA domain-containing protein
1582 SEQF1948.2_KB291553.1 SEQF1948.2_01640 open 1419 [NA] 472 [AA] 769542-770960 hypothetical protein
1583 SEQF1948.2_KB291553.1 SEQF1948.2_01641 open 618 [NA] 205 [AA] 771058-771675 yciO putative protein YciO
1584 SEQF1948.2_KB291553.1 SEQF1948.2_01642 open 2376 [NA] 791 [AA] 771693-774068 hypothetical protein
1585 SEQF1948.2_KB291553.1 SEQF1948.2_01643 open 1809 [NA] 602 [AA] 774225-776033 aspS Aspartate--tRNA(AspAsn) ligase
1586 SEQF1948.2_KB291553.1 SEQF1948.2_01644 open 1383 [NA] 460 [AA] 776242-777624 hypothetical protein
1587 SEQF1948.2_KB291553.1 SEQF1948.2_01645 open 1989 [NA] 662 [AA] 777637-779625 deaD_2 ATP-dependent RNA helicase DeaD
1588 SEQF1948.2_KB291553.1 SEQF1948.2_01646 open 1356 [NA] 451 [AA] 779817-781172 hisS Histidine--tRNA ligase
1589 SEQF1948.2_KB291553.1 SEQF1948.2_01647 open 744 [NA] 247 [AA] 781238-781981 putative protein
1590 SEQF1948.2_KB291553.1 SEQF1948.2_01648 open 1314 [NA] 437 [AA] 781978-783291 putative protein
1591 SEQF1948.2_KB291553.1 SEQF1948.2_01649 open 2307 [NA] 768 [AA] 783457-785763 relA Bifunctional (p)ppGpp synthasehydrolase RelA
1592 SEQF1948.2_KB291553.1 SEQF1948.2_01650 open 543 [NA] 180 [AA] 785806-786348 apt Adenine phosphoribosyltransferase
1593 SEQF1948.2_KB291553.1 SEQF1948.2_01651 open 1068 [NA] 355 [AA] 786348-787415 secF Protein translocase subunit SecF
1594 SEQF1948.2_KB291553.1 SEQF1948.2_01652 open 1953 [NA] 650 [AA] 787412-789364 secD Protein translocase subunit SecD
1595 SEQF1948.2_KB291553.1 SEQF1948.2_01653 open 375 [NA] 124 [AA] 789393-789767 hypothetical protein
1596 SEQF1948.2_KB291553.1 SEQF1948.2_01654 open 1035 [NA] 344 [AA] 789868-790902 ruvB Holliday junction ATP-dependent DNA helicase RuvB
1597 SEQF1948.2_KB291553.1 SEQF1948.2_01655 open 594 [NA] 197 [AA] 790892-791485 ruvA Holliday junction ATP-dependent DNA helicase RuvA
1598 SEQF1948.2_KB291553.1 SEQF1948.2_01656 open 630 [NA] 209 [AA] 791536-792165 ruvC Crossover junction endodeoxyribonuclease RuvC
1599 SEQF1948.2_KB291553.1 SEQF1948.2_01657 open 597 [NA] 198 [AA] 792168-792764 pdxT Pyridoxal 5-phosphate synthase subunit PdxT
1600 SEQF1948.2_KB291553.1 SEQF1948.2_01658 open 903 [NA] 300 [AA] 792758-793660 pdxS Pyridoxal 5-phosphate synthase subunit PdxS
1601 SEQF1948.2_KB291553.1 SEQF1948.2_01659 open 762 [NA] 253 [AA] 793664-794425 putative transcriptional regulatory proteinMSMEI_2866
1602 SEQF1948.2_KB291553.1 SEQF1948.2_01660 open 243 [NA] 80 [AA] 794583-794825 hypothetical protein
1603 SEQF1948.2_KB291553.1 SEQF1948.2_01661 open 672 [NA] 223 [AA] 794807-795478 PE-PGRS family protein PE_PGRS11
1604 SEQF1948.2_KB291553.1 SEQF1948.2_01662 open 2958 [NA] 985 [AA] 795503-798460 glnE Bifunctional glutamine synthetase adenylyltransferaseadenylyl-removing enzyme
1605 SEQF1948.2_KB291553.1 SEQF1948.2_01663 open 1338 [NA] 445 [AA] 798457-799794 glnA_2 Glutamine synthetase
1606 SEQF1948.2_KB291553.1 SEQF1948.2_01664 open 954 [NA] 317 [AA] 799804-800757 putative protein
1607 SEQF1948.2_KB291553.1 SEQF1948.2_01665 open 432 [NA] 143 [AA] 800794-801225 hypothetical protein
1608 SEQF1948.2_KB291553.1 SEQF1948.2_01666 open 789 [NA] 262 [AA] 801261-802049 ylmA putative ABC transporter ATP-binding protein YlmA
1609 SEQF1948.2_KB291553.1 SEQF1948.2_01667 open 1212 [NA] 403 [AA] 802101-803312 glgM Alpha-maltose-1-phosphate synthase
1610 SEQF1948.2_KB291553.1 SEQF1948.2_01668 open 1239 [NA] 412 [AA] 803431-804669 glgC Glucose-1-phosphate adenylyltransferase
1611 SEQF1948.2_KB291553.1 SEQF1948.2_01669 open 516 [NA] 171 [AA] 804730-805245 rppH RNA pyrophosphohydrolase
1612 SEQF1948.2_KB291553.1 SEQF1948.2_01670 open 1269 [NA] 422 [AA] 805242-806510 hypothetical protein
1613 SEQF1948.2_KB291553.1 SEQF1948.2_01671 open 624 [NA] 207 [AA] 806511-807134 hypothetical protein
1614 SEQF1948.2_KB291553.1 SEQF1948.2_01672 open 1179 [NA] 392 [AA] 807127-808305 pimA Phosphatidyl-myo-inositol mannosyltransferase
1615 SEQF1948.2_KB291553.1 SEQF1948.2_01673 open 921 [NA] 306 [AA] 808306-809226 Phosphatidylinositol mannoside acyltransferase
1616 SEQF1948.2_KB291553.1 SEQF1948.2_01674 open 630 [NA] 209 [AA] 809226-809855 pgsA_2 Phosphatidylinositol phosphate synthase
1617 SEQF1948.2_KB291553.1 SEQF1948.2_01675 open 564 [NA] 187 [AA] 809855-810418 AP-4-A phosphorylase
1618 SEQF1948.2_KB291553.1 SEQF1948.2_01676 open 1989 [NA] 662 [AA] 810424-812412 thrS Threonine--tRNA ligase
1619 SEQF1948.2_KB291553.1 SEQF1948.2_01677 open 1020 [NA] 339 [AA] 812547-813566 hypothetical protein
1620 SEQF1948.2_KB291553.1 SEQF1948.2_01678 open 1251 [NA] 416 [AA] 813580-814830 D-aspartate ligase
1621 SEQF1948.2_KB291553.1 SEQF1948.2_01679 open 483 [NA] 160 [AA] 814905-815387 hypothetical protein
1622 SEQF1948.2_KB291553.1 SEQF1948.2_01680 open 468 [NA] 155 [AA] 815387-815854 sufU Zinc-dependent sulfurtransferase SufU
1623 SEQF1948.2_KB291553.1 SEQF1948.2_01681 open 1278 [NA] 425 [AA] 815854-817131 csd putative cysteine desulfurase
1624 SEQF1948.2_KB291553.1 SEQF1948.2_01682 open 753 [NA] 250 [AA] 817141-817893 sufC Vegetative protein 296
1625 SEQF1948.2_KB291553.1 SEQF1948.2_01683 open 1182 [NA] 393 [AA] 817954-819135 hypothetical protein
1626 SEQF1948.2_KB291553.1 SEQF1948.2_01684 open 1446 [NA] 481 [AA] 819135-820580 hypothetical protein
1627 SEQF1948.2_KB291553.1 SEQF1948.2_01685 open 693 [NA] 230 [AA] 820620-821312 hypothetical protein
1628 SEQF1948.2_KB291553.1 SEQF1948.2_01686 open 618 [NA] 205 [AA] 821450-822067 act Methanol dehydrogenase activator
1629 SEQF1948.2_KB291553.1 SEQF1948.2_01687 open 906 [NA] 301 [AA] 822082-822987 mctB Copper transporter MctB
1630 SEQF1948.2_KB291553.1 SEQF1948.2_01688 open 1209 [NA] 402 [AA] 823000-824208 hypothetical protein
1631 SEQF1948.2_KB291553.1 SEQF1948.2_01689 open 1686 [NA] 561 [AA] 824205-825890 recN DNA repair protein RecN
1632 SEQF1948.2_KB291553.1 SEQF1948.2_01690 open 858 [NA] 285 [AA] 825887-826744 ppnK NAD kinase
1633 SEQF1948.2_KB291553.1 SEQF1948.2_01691 open 852 [NA] 283 [AA] 826759-827610 tlyA 16S23S rRNA (cytidine-2-O)-methyltransferase TlyA
1634 SEQF1948.2_KB291553.1 SEQF1948.2_01692 open 138 [NA] 45 [AA] 827610-827747 hypothetical protein
1635 SEQF1948.2_KB291553.1 SEQF1948.2_01693 open 1764 [NA] 587 [AA] 827750-829513 hypothetical protein