Genome Explorer: Helicobacter pylori LIM-007 (SEQF10116.1)
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PROKKA Annotation for SEQF10116.1
| Genome selected: Helicobacter pylori LIM-007 | |||
| Contigs: | 1 | Bases: | 1651043 bps |
| CDS: | 1546 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 36 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | SEQF10116.1_CP051536.1 | SEQF10116.1_01554 | open | 1578 [NA] | 525 [AA] | 1607861-1609438 | secD | Protein translocase subunit SecD |
| 1502 | SEQF10116.1_CP051536.1 | SEQF10116.1_01555 | open | 972 [NA] | 323 [AA] | 1609447-1610418 | secF | Protein translocase subunit SecF |
| 1503 | SEQF10116.1_CP051536.1 | SEQF10116.1_01556 | open | 339 [NA] | 112 [AA] | 1610428-1610766 | hypothetical protein | |
| 1504 | SEQF10116.1_CP051536.1 | SEQF10116.1_01557 | open | 2421 [NA] | 806 [AA] | 1610776-1613196 | leuS | Leucine--tRNA ligase |
| 1505 | SEQF10116.1_CP051536.1 | SEQF10116.1_01558 | open | 513 [NA] | 170 [AA] | 1613193-1613705 | hypothetical protein | |
| 1506 | SEQF10116.1_CP051536.1 | SEQF10116.1_01559 | open | 1170 [NA] | 389 [AA] | 1613695-1614864 | folC | Dihydrofolate synthasefolylpolyglutamate synthase |
| 1507 | SEQF10116.1_CP051536.1 | SEQF10116.1_01560 | open | 927 [NA] | 308 [AA] | 1614864-1615790 | hypothetical protein | |
| 1508 | SEQF10116.1_CP051536.1 | SEQF10116.1_01561 | open | 936 [NA] | 311 [AA] | 1615799-1616734 | hypothetical protein | |
| 1509 | SEQF10116.1_CP051536.1 | SEQF10116.1_01562 | open | 315 [NA] | 104 [AA] | 1616749-1617063 | hypothetical protein | |
| 1510 | SEQF10116.1_CP051536.1 | SEQF10116.1_01563 | open | 3000 [NA] | 999 [AA] | 1617067-1620066 | mfd | Transcription-repair-coupling factor |
| 1511 | SEQF10116.1_CP051536.1 | SEQF10116.1_01564 | open | 504 [NA] | 167 [AA] | 1620192-1620695 | petA | Ubiquinol-cytochrome c reductase iron-sulfur subunit |
| 1512 | SEQF10116.1_CP051536.1 | SEQF10116.1_01565 | open | 1239 [NA] | 412 [AA] | 1620706-1621944 | petB | Cytochrome b |
| 1513 | SEQF10116.1_CP051536.1 | SEQF10116.1_01566 | open | 858 [NA] | 285 [AA] | 1621941-1622798 | hypothetical protein | |
| 1514 | SEQF10116.1_CP051536.1 | SEQF10116.1_01567 | open | 189 [NA] | 62 [AA] | 1623006-1623194 | hypothetical protein | |
| 1515 | SEQF10116.1_CP051536.1 | SEQF10116.1_01568 | open | 1857 [NA] | 618 [AA] | 1623770-1625626 | ftsI | Peptidoglycan D%2CD-transpeptidase FtsI |
| 1516 | SEQF10116.1_CP051536.1 | SEQF10116.1_01569 | open | 330 [NA] | 109 [AA] | 1625783-1626112 | fliE | Flagellar hook-basal body complex protein FliE |
| 1517 | SEQF10116.1_CP051536.1 | SEQF10116.1_01570 | open | 486 [NA] | 161 [AA] | 1626240-1626725 | flgC | Flagellar basal-body rod protein FlgC |
| 1518 | SEQF10116.1_CP051536.1 | SEQF10116.1_01571 | open | 423 [NA] | 140 [AA] | 1626738-1627160 | flgB | Flagellar basal body rod protein FlgB |
| 1519 | SEQF10116.1_CP051536.1 | SEQF10116.1_01572 | open | 1167 [NA] | 388 [AA] | 1627367-1628533 | ftsW | putative peptidoglycan glycosyltransferase FtsW |
| 1520 | SEQF10116.1_CP051536.1 | SEQF10116.1_01573 | open | 1008 [NA] | 335 [AA] | 1628544-1629551 | hypothetical protein | |
| 1521 | SEQF10116.1_CP051536.1 | SEQF10116.1_01574 | open | 1002 [NA] | 333 [AA] | 1629737-1630738 | hypothetical protein | |
| 1522 | SEQF10116.1_CP051536.1 | SEQF10116.1_01575 | open | 597 [NA] | 198 [AA] | 1630977-1631573 | ahpC | Alkyl hydroperoxide reductase C |
| 1523 | SEQF10116.1_CP051536.1 | SEQF10116.1_01576 | open | 816 [NA] | 271 [AA] | 1631721-1632536 | metQ | D-methionine-binding lipoprotein MetQ |
| 1524 | SEQF10116.1_CP051536.1 | SEQF10116.1_01577 | open | 1776 [NA] | 591 [AA] | 1632603-1634378 | mrdA | Peptidoglycan D%2CD-transpeptidase MrdA |
| 1525 | SEQF10116.1_CP051536.1 | SEQF10116.1_01578 | open | 444 [NA] | 147 [AA] | 1634359-1634802 | hypothetical protein | |
| 1526 | SEQF10116.1_CP051536.1 | SEQF10116.1_01579 | open | 627 [NA] | 208 [AA] | 1634815-1635441 | engB | GTP-binding protein EngB |
| 1527 | SEQF10116.1_CP051536.1 | SEQF10116.1_01580 | open | 558 [NA] | 185 [AA] | 1635438-1635995 | lptA | Lipopolysaccharide export system protein LptA |
| 1528 | SEQF10116.1_CP051536.1 | SEQF10116.1_01581 | open | 594 [NA] | 197 [AA] | 1635995-1636588 | hypothetical protein | |
| 1529 | SEQF10116.1_CP051536.1 | SEQF10116.1_01582 | open | 495 [NA] | 164 [AA] | 1636563-1637057 | kdsC | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC |
| 1530 | SEQF10116.1_CP051536.1 | SEQF10116.1_01583 | open | 948 [NA] | 315 [AA] | 1637054-1638001 | rlpA | Endolytic peptidoglycan transglycosylase RlpA |
| 1531 | SEQF10116.1_CP051536.1 | SEQF10116.1_01584 | open | 1125 [NA] | 374 [AA] | 1638001-1639125 | hypothetical protein | |
| 1532 | SEQF10116.1_CP051536.1 | SEQF10116.1_01585 | open | 765 [NA] | 254 [AA] | 1639214-1639978 | ycfH | putative metal-dependent hydrolase YcfH |
| 1533 | SEQF10116.1_CP051536.1 | SEQF10116.1_01586 | open | 621 [NA] | 206 [AA] | 1640053-1640673 | ribE | Riboflavin synthase |
| 1534 | SEQF10116.1_CP051536.1 | SEQF10116.1_01587 | open | 273 [NA] | 90 [AA] | 1640674-1640946 | hypothetical protein | |
| 1535 | SEQF10116.1_CP051536.1 | SEQF10116.1_01588 | open | 984 [NA] | 327 [AA] | 1640968-1641951 | metN | Methionine import ATP-binding protein MetN |
| 1536 | SEQF10116.1_CP051536.1 | SEQF10116.1_01589 | open | 648 [NA] | 215 [AA] | 1641953-1642600 | metI | D-methionine transport system permease protein MetI |
| 1537 | SEQF10116.1_CP051536.1 | SEQF10116.1_01590 | open | 432 [NA] | 143 [AA] | 1642788-1643219 | hypothetical protein | |
| 1538 | SEQF10116.1_CP051536.1 | SEQF10116.1_01592 | open | 597 [NA] | 198 [AA] | 1643229-1643825 | hypothetical protein | |
| 1539 | SEQF10116.1_CP051536.1 | SEQF10116.1_01593 | open | 936 [NA] | 311 [AA] | 1643825-1644760 | wecA | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 1540 | SEQF10116.1_CP051536.1 | SEQF10116.1_01594 | open | 789 [NA] | 262 [AA] | 1644959-1645747 | pdxJ | Pyridoxine 5-phosphate synthase |
| 1541 | SEQF10116.1_CP051536.1 | SEQF10116.1_01595 | open | 924 [NA] | 307 [AA] | 1645749-1646672 | pdxA | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1542 | SEQF10116.1_CP051536.1 | SEQF10116.1_01596 | open | 1023 [NA] | 340 [AA] | 1646736-1647758 | tsaD | tRNA N6-adenosine threonylcarbamoyltransferase |
| 1543 | SEQF10116.1_CP051536.1 | SEQF10116.1_01597 | open | 789 [NA] | 262 [AA] | 1647937-1648725 | flgG_2 | Flagellar basal-body rod protein FlgG |
| 1544 | SEQF10116.1_CP051536.1 | SEQF10116.1_01598 | open | 615 [NA] | 204 [AA] | 1648743-1649357 | hypothetical protein | |
| 1545 | SEQF10116.1_CP051536.1 | SEQF10116.1_01599 | open | 141 [NA] | 46 [AA] | 1649814-1649954 | hypothetical protein | |
| 1546 | SEQF10116.1_CP051536.1 | SEQF10116.1_01600 | open | 762 [NA] | 253 [AA] | 1650038-1650799 | hypothetical protein |