Genome Explorer: Lentilactobacillus rapi NBRC 109618 (SEQF9968.1)
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NCBI Annotation for SEQF9968.1
| Genome selected: Lentilactobacillus rapi NBRC 109618 | |||
| Contigs: | 166 | Bases: | 2833656 bps |
| CDS: | 2621 | rRNA: | 2 |
| tmRNA: | 1 | tRNA: | 40 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2501 | BKAM01000106.1 | GEP73633.1 | open | 1047 [NA] | 348 [AA] | 4748-5794 | LRA02_25010 | luciferase |
| 2502 | BKAM01000107.1 | GEP73634.1 | open | 1242 [NA] | 413 [AA] | 124-1365 | LRA02_25020 | cytosine deaminase |
| 2503 | BKAM01000107.1 | GEP73635.1 | open | 1338 [NA] | 445 [AA] | 1490-2827 | LRA02_25030 | potassium uptake protein |
| 2504 | BKAM01000107.1 | GEP73636.1 | open | 666 [NA] | 221 [AA] | 3085-3750 | LRA02_25040 | potassium transporter Trk |
| 2505 | BKAM01000107.1 | GEP73637.1 | open | 1992 [NA] | 663 [AA] | 3859-5850 | LRA02_25050 | sodium:proton antiporter |
| 2506 | BKAM01000108.1 | GEP73638.1 | open | 939 [NA] | 312 [AA] | 27-965 | LRA02_25060 | hypothetical protein |
| 2507 | BKAM01000108.1 | GEP73639.1 | open | 1392 [NA] | 463 [AA] | 1384-2775 | LRA02_25070 | amino acid permease |
| 2508 | BKAM01000108.1 | GEP73640.1 | open | 2013 [NA] | 670 [AA] | 3183-5195 | LRA02_25080 | DHH family phosphoesterase |
| 2509 | BKAM01000108.1 | GEP73641.1 | open | 453 [NA] | 150 [AA] | 5233-5685 | LRA02_25090 | 50S ribosomal protein L9 |
| 2510 | BKAM01000109.1 | GEP73642.1 | open | 786 [NA] | 261 [AA] | 273-1058 | LRA02_25100 | hypothetical protein |
| 2511 | BKAM01000109.1 | GEP73643.1 | open | 798 [NA] | 265 [AA] | 1190-1987 | LRA02_25110 | tryptophan synthase alpha chain |
| 2512 | BKAM01000109.1 | GEP73644.1 | open | 1218 [NA] | 405 [AA] | 1980-3197 | LRA02_25120 | tryptophan synthase beta chain |
| 2513 | BKAM01000109.1 | GEP73645.1 | open | 588 [NA] | 195 [AA] | 3194-3781 | LRA02_25130 | N-(5'-phosphoribosyl)anthranilate isomerase |
| 2514 | BKAM01000109.1 | GEP73646.1 | open | 780 [NA] | 259 [AA] | 3784-4563 | LRA02_25140 | indole-3-glycerol phosphate synthase |
| 2515 | BKAM01000109.1 | GEP73647.1 | open | 1026 [NA] | 341 [AA] | 4560-5585 | LRA02_25150 | anthranilate phosphoribosyltransferase |
| 2516 | BKAM01000110.1 | GEP73648.1 | open | 585 [NA] | 194 [AA] | 49-633 | LRA02_25160 | signal peptidase I |
| 2517 | BKAM01000110.1 | GEP73649.1 | open | 246 [NA] | 81 [AA] | 963-1208 | LRA02_25170 | hypothetical protein |
| 2518 | BKAM01000110.1 | GEP73650.1 | open | 345 [NA] | 114 [AA] | 1279-1623 | LRA02_25180 | hypothetical protein |
| 2519 | BKAM01000110.1 | GEP73651.1 | open | 1515 [NA] | 504 [AA] | 1731-3245 | LRA02_25190 | multicopper oxidase |
| 2520 | BKAM01000110.1 | GEP73652.1 | open | 1272 [NA] | 423 [AA] | 4067-5338 | LRA02_25200 | proton glutamate symport protein |
| 2521 | BKAM01000111.1 | GEP73653.1 | open | 1383 [NA] | 460 [AA] | 63-1445 | LRA02_25210 | MFS transporter |
| 2522 | BKAM01000111.1 | GEP73654.1 | open | 711 [NA] | 236 [AA] | 1849-2559 | LRA02_25220 | alpha-acetolactate decarboxylase |
| 2523 | BKAM01000111.1 | GEP73655.1 | open | 1677 [NA] | 558 [AA] | 2579-4255 | LRA02_25230 | acetolactate synthase |
| 2524 | BKAM01000111.1 | GEP73656.1 | open | 684 [NA] | 227 [AA] | 4452-5135 | LRA02_25240 | noncanonical pyrimidine nucleotidase, YjjG family protein |
| 2525 | BKAM01000112.1 | GEP73657.1 | open | 876 [NA] | 291 [AA] | 307-1182 | LRA02_25250 | homoserine O-succinyltransferase |
| 2526 | BKAM01000112.1 | GEP73658.1 | open | 780 [NA] | 259 [AA] | 1620-2399 | LRA02_25260 | membrane protein |
| 2527 | BKAM01000112.1 | GEP73659.1 | open | 468 [NA] | 155 [AA] | 2399-2866 | LRA02_25270 | membrane protein |
| 2528 | BKAM01000112.1 | GEP73660.1 | open | 1086 [NA] | 361 [AA] | 3288-4373 | LRA02_25280 | malate dehydrogenase |
| 2529 | BKAM01000112.1 | GEP73661.1 | open | 642 [NA] | 213 [AA] | 4478-5119 | LRA02_25290 | NAD-dependent dehydratase |
| 2530 | BKAM01000113.1 | GEP73662.1 | open | 135 [NA] | 44 [AA] | 1996-2130 | LRA02_25300 | hypothetical protein |
| 2531 | BKAM01000113.1 | GEP73663.1 | open | 507 [NA] | 168 [AA] | 2343-2849 | LRA02_25310 | pyridoxamine 5'-phosphate oxidase |
| 2532 | BKAM01000113.1 | GEP73664.1 | open | 993 [NA] | 330 [AA] | 2867-3859 | LRA02_25320 | lactate dehydrogenase |
| 2533 | BKAM01000113.1 | GEP73665.1 | open | 1185 [NA] | 394 [AA] | 3882-5066 | LRA02_25330 | aminotransferase |
| 2534 | BKAM01000114.1 | GEP73666.1 | open | 633 [NA] | 210 [AA] | 867-1499 | LRA02_25340 | putative ABC transporter ATP-binding protein YybJ |
| 2535 | BKAM01000114.1 | GEP73667.1 | open | 2496 [NA] | 831 [AA] | 1769-4264 | LRA02_25350 | glucosidase |
| 2536 | BKAM01000115.1 | GEP73668.1 | open | 1881 [NA] | 626 [AA] | 1727-3607 | LRA02_25360 | multidrug ABC transporter ATP-binding protein |
| 2537 | BKAM01000115.1 | GEP73669.1 | open | 924 [NA] | 307 [AA] | 3621-4544 | LRA02_25370 | lipoprotein |
| 2538 | BKAM01000116.1 | GEP73670.1 | open | 351 [NA] | 116 [AA] | 89-439 | LRA02_25380 | hypothetical protein |
| 2539 | BKAM01000116.1 | GEP73671.1 | open | 1191 [NA] | 396 [AA] | 508-1698 | LRA02_25390 | hypothetical protein |
| 2540 | BKAM01000116.1 | GEP73672.1 | open | 1575 [NA] | 524 [AA] | 1833-3407 | LRA02_25400 | amidohydrolase |
| 2541 | BKAM01000117.1 | GEP73673.1 | open | 1089 [NA] | 362 [AA] | 168-1256 | LRA02_25410 | spermidine/putrescine import ATP-binding protein PotA |
| 2542 | BKAM01000117.1 | GEP73674.1 | open | 816 [NA] | 271 [AA] | 1266-2081 | LRA02_25420 | spermidine/putrescine ABC transporter permease |
| 2543 | BKAM01000117.1 | GEP73675.1 | open | 822 [NA] | 273 [AA] | 2081-2902 | LRA02_25430 | spermidine/putrescine ABC transporter permease |
| 2544 | BKAM01000117.1 | GEP73676.1 | open | 1071 [NA] | 356 [AA] | 2899-3969 | LRA02_25440 | spermidine/putrescine ABC transporter substrate-binding protein |
| 2545 | BKAM01000117.1 | GEP73677.1 | open | 330 [NA] | 109 [AA] | 4035-4364 | LRA02_25450 | hypothetical protein |
| 2546 | BKAM01000118.1 | GEP73678.1 | open | 702 [NA] | 233 [AA] | 267-968 | LRA02_25460 | GntR family transcriptional regulator |
| 2547 | BKAM01000118.1 | GEP73679.1 | open | 1341 [NA] | 446 [AA] | 1059-2399 | LRA02_25470 | MATE family efflux transporter |
| 2548 | BKAM01000118.1 | GEP73680.1 | open | 195 [NA] | 64 [AA] | 2557-2751 | LRA02_25480 | hypothetical protein |
| 2549 | BKAM01000119.1 | GEP73681.1 | open | 876 [NA] | 291 [AA] | 465-1340 | LRA02_25490 | hypothetical protein |
| 2550 | BKAM01000119.1 | GEP73682.1 | open | 1239 [NA] | 412 [AA] | 1615-2853 | LRA02_25500 | hypothetical protein |
| 2551 | BKAM01000119.1 | GEP73683.1 | open | 1413 [NA] | 470 [AA] | 2869-4281 | LRA02_25510 | MFS transporter |
| 2552 | BKAM01000120.1 | GEP73684.1 | open | 1035 [NA] | 344 [AA] | 544-1578 | LRA02_25520 | ketol-acid reductoisomerase (NADP(+)) |
| 2553 | BKAM01000120.1 | GEP73685.1 | open | 783 [NA] | 260 [AA] | 1985-2767 | LRA02_25530 | ABC transporter ATP-binding protein |
| 2554 | BKAM01000120.1 | GEP73686.1 | open | 897 [NA] | 298 [AA] | 2826-3722 | LRA02_25540 | hypothetical protein |
| 2555 | BKAM01000121.1 | GEP73687.1 | open | 933 [NA] | 310 [AA] | 1506-2438 | LRA02_25550 | LysR family transcriptional regulator |
| 2556 | BKAM01000121.1 | GEP73688.1 | open | 1305 [NA] | 434 [AA] | 2644-3948 | LRA02_25560 | xanthine permease |
| 2557 | BKAM01000122.1 | GEP73689.1 | open | 855 [NA] | 284 [AA] | 287-1141 | LRA02_25570 | hypothetical protein |
| 2558 | BKAM01000122.1 | GEP73690.1 | open | 732 [NA] | 243 [AA] | 1491-2222 | LRA02_25580 | hypothetical protein |
| 2559 | BKAM01000122.1 | GEP73691.1 | open | 1290 [NA] | 429 [AA] | 2972-4261 | LRA02_25590 | O-acetylhomoserine aminocarboxypropyltransferase |
| 2560 | BKAM01000123.1 | GEP73692.1 | open | 723 [NA] | 240 [AA] | 417-1139 | LRA02_25600 | demethylmenaquinone methyltransferase |
| 2561 | BKAM01000123.1 | GEP73693.1 | open | 912 [NA] | 303 [AA] | 1207-2118 | LRA02_25610 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
| 2562 | BKAM01000123.1 | GEP73694.1 | open | 540 [NA] | 179 [AA] | 2218-2757 | LRA02_25620 | membrane protein |
| 2563 | BKAM01000123.1 | GEP73695.1 | open | 927 [NA] | 308 [AA] | 2903-3829 | LRA02_25630 | L-lactate dehydrogenase |
| 2564 | BKAM01000124.1 | GEP73696.1 | open | 915 [NA] | 304 [AA] | 96-1010 | LRA02_25640 | proline iminopeptidase |
| 2565 | BKAM01000124.1 | GEP73697.1 | open | 2412 [NA] | 803 [AA] | 1073-3484 | LRA02_25650 | Xaa-Pro dipeptidyl-peptidase |
| 2566 | BKAM01000125.1 | GEP73698.1 | open | 1221 [NA] | 406 [AA] | 199-1419 | LRA02_25660 | AraC family transcriptional regulator |
| 2567 | BKAM01000125.1 | GEP73699.1 | open | 1815 [NA] | 604 [AA] | 1564-3378 | LRA02_25670 | beta-glucuronidase |
| 2568 | BKAM01000126.1 | GEP73700.1 | open | 372 [NA] | 123 [AA] | 287-658 | LRA02_25680 | hypothetical protein |
| 2569 | BKAM01000126.1 | GEP73701.1 | open | 975 [NA] | 324 [AA] | 762-1736 | LRA02_25690 | L-asparaginase |
| 2570 | BKAM01000126.1 | GEP73702.1 | open | 1164 [NA] | 387 [AA] | 1869-3032 | LRA02_25700 | hypothetical protein |
| 2571 | BKAM01000126.1 | GEP73703.1 | open | 240 [NA] | 79 [AA] | 3066-3305 | LRA02_25710 | hypothetical protein |
| 2572 | BKAM01000128.1 | GEP73704.1 | open | 2400 [NA] | 799 [AA] | 73-2472 | LRA02_25720 | phosphoketolase |
| 2573 | BKAM01000128.1 | GEP73705.1 | open | 189 [NA] | 62 [AA] | 2785-2973 | LRA02_25730 | hypothetical protein |
| 2574 | BKAM01000129.1 | GEP73706.1 | open | 177 [NA] | 58 [AA] | 8-184 | LRA02_25740 | hypothetical protein |
| 2575 | BKAM01000129.1 | GEP73707.1 | open | 1644 [NA] | 547 [AA] | 359-2002 | LRA02_25750 | hypothetical protein |
| 2576 | BKAM01000130.1 | GEP73708.1 | open | 1491 [NA] | 496 [AA] | 224-1714 | LRA02_25760 | MFS transporter |
| 2577 | BKAM01000130.1 | GEP73709.1 | open | 312 [NA] | 103 [AA] | 1906-2217 | LRA02_25770 | hypothetical protein |
| 2578 | BKAM01000130.1 | GEP73710.1 | open | 318 [NA] | 105 [AA] | 2217-2534 | LRA02_25780 | hypothetical protein |
| 2579 | BKAM01000131.1 | GEP73711.1 | open | 1812 [NA] | 603 [AA] | 223-2034 | LRA02_25790 | beta-glucuronidase |
| 2580 | BKAM01000131.1 | GEP73712.1 | open | 126 [NA] | 41 [AA] | 2362-2487 | LRA02_25800 | hypothetical protein |
| 2581 | BKAM01000132.1 | GEP73713.1 | open | 480 [NA] | 159 [AA] | 500-979 | LRA02_25810 | hypothetical protein |
| 2582 | BKAM01000132.1 | GEP73714.1 | open | 384 [NA] | 127 [AA] | 1054-1437 | LRA02_25820 | hypothetical protein |
| 2583 | BKAM01000132.1 | GEP73715.1 | open | 555 [NA] | 184 [AA] | 1494-2048 | LRA02_25830 | N-acetyltransferase |
| 2584 | BKAM01000134.1 | GEP73716.1 | open | 894 [NA] | 297 [AA] | 293-1186 | LRA02_25840 | phosphate ABC transporter substrate-binding protein |
| 2585 | BKAM01000134.1 | GEP73717.1 | open | 720 [NA] | 239 [AA] | 1375-2094 | LRA02_25850 | DNA-binding response regulator |
| 2586 | BKAM01000135.1 | GEP73718.1 | open | 1776 [NA] | 591 [AA] | 249-2024 | LRA02_25860 | ATP-dependent DNA helicase RecQ |
| 2587 | BKAM01000136.1 | GEP73719.1 | open | 297 [NA] | 98 [AA] | 665-961 | LRA02_25870 | 30S ribosomal protein S6 |
| 2588 | BKAM01000136.1 | GEP73720.1 | open | 555 [NA] | 184 [AA] | 995-1549 | LRA02_25880 | single-stranded DNA-binding protein |
| 2589 | BKAM01000136.1 | GEP73721.1 | open | 237 [NA] | 78 [AA] | 1587-1823 | LRA02_25890 | 30S ribosomal protein S18 |
| 2590 | BKAM01000137.1 | GEP73722.1 | open | 1416 [NA] | 471 [AA] | 48-1463 | LRA02_25900 | Na+/H+ antiporter NhaC |
| 2591 | BKAM01000138.1 | GEP73723.1 | open | 738 [NA] | 245 [AA] | 54-791 | LRA02_25910 | ATP-binding protein |
| 2592 | BKAM01000138.1 | GEP73724.1 | open | 1224 [NA] | 407 [AA] | 801-2024 | LRA02_25920 | IS21 family transposase |
| 2593 | BKAM01000139.1 | GEP73725.1 | open | 1119 [NA] | 372 [AA] | 99-1217 | LRA02_25930 | aminotransferase |
| 2594 | BKAM01000139.1 | GEP73726.1 | open | 123 [NA] | 40 [AA] | 1369-1491 | LRA02_25940 | hypothetical protein |
| 2595 | BKAM01000139.1 | GEP73727.1 | open | 408 [NA] | 135 [AA] | 1562-1969 | LRA02_25950 | regulatory protein Spx |
| 2596 | BKAM01000140.1 | GEP73728.1 | open | 183 [NA] | 60 [AA] | 286-468 | LRA02_25960 | hypothetical protein |
| 2597 | BKAM01000140.1 | GEP73729.1 | open | 1386 [NA] | 461 [AA] | 603-1988 | LRA02_25970 | replicative DNA helicase |
| 2598 | BKAM01000141.1 | GEP73730.1 | open | 744 [NA] | 247 [AA] | 102-845 | LRA02_25980 | hypothetical protein |
| 2599 | BKAM01000141.1 | GEP73731.1 | open | 723 [NA] | 240 [AA] | 1079-1801 | LRA02_25990 | hypothetical protein |
| 2600 | BKAM01000142.1 | GEP73732.1 | open | 1056 [NA] | 351 [AA] | 114-1169 | LRA02_26000 | hypothetical protein |
| 2601 | BKAM01000144.1 | GEP73733.1 | open | 489 [NA] | 162 [AA] | 130-618 | LRA02_26010 | hypothetical protein |
| 2602 | BKAM01000144.1 | GEP73734.1 | open | 399 [NA] | 132 [AA] | 744-1142 | LRA02_26020 | antitoxin HicB |
| 2603 | BKAM01000144.1 | GEP73735.1 | open | 192 [NA] | 63 [AA] | 1172-1363 | LRA02_26030 | hypothetical protein |
| 2604 | BKAM01000145.1 | GEP73736.1 | open | 1320 [NA] | 439 [AA] | 163-1482 | LRA02_26040 | MFS transporter |
| 2605 | BKAM01000146.1 | GEP73737.1 | open | 1446 [NA] | 481 [AA] | 36-1481 | LRA02_26050 | hypothetical protein |
| 2606 | BKAM01000147.1 | GEP73738.1 | open | 1401 [NA] | 466 [AA] | 187-1587 | LRA02_26060 | MFS transporter |
| 2607 | BKAM01000148.1 | GEP73739.1 | open | 918 [NA] | 305 [AA] | 25-942 | LRA02_26070 | oxidoreductase ion channel protein IolS |
| 2608 | BKAM01000148.1 | GEP73740.1 | open | 480 [NA] | 159 [AA] | 1070-1549 | LRA02_26080 | DNA starvation/stationary phase protection protein |
| 2609 | BKAM01000149.1 | GEP73741.1 | open | 1206 [NA] | 401 [AA] | 194-1399 | LRA02_26090 | IS110 family transposase |
| 2610 | BKAM01000150.1 | GEP73742.1 | open | 552 [NA] | 183 [AA] | 131-682 | LRA02_26100 | phosphohydrolase |
| 2611 | BKAM01000150.1 | GEP73743.1 | open | 579 [NA] | 192 [AA] | 787-1365 | LRA02_26110 | DNA-3-methyladenine glycosylase I |
| 2612 | BKAM01000151.1 | GEP73744.1 | open | 1194 [NA] | 397 [AA] | 172-1365 | LRA02_26120 | IS110 family transposase |
| 2613 | BKAM01000154.1 | GEP73745.1 | open | 486 [NA] | 161 [AA] | 60-545 | LRA02_26130 | universal stress protein |
| 2614 | BKAM01000155.1 | GEP73746.1 | open | 771 [NA] | 256 [AA] | 297-1067 | LRA02_26140 | CAAX amino protease |
| 2615 | BKAM01000156.1 | GEP73747.1 | open | 990 [NA] | 329 [AA] | 13-1002 | LRA02_26150 | IS30 family transposase |
| 2616 | BKAM01000157.1 | GEP73748.1 | open | 498 [NA] | 165 [AA] | 535-1032 | LRA02_26160 | hypothetical protein |
| 2617 | BKAM01000159.1 | GEP73749.1 | open | 792 [NA] | 263 [AA] | 98-889 | LRA02_26170 | hypothetical protein |
| 2618 | BKAM01000160.1 | GEP73750.1 | open | 300 [NA] | 99 [AA] | 73-372 | LRA02_26180 | transposase |
| 2619 | BKAM01000161.1 | GEP73751.1 | open | 309 [NA] | 102 [AA] | 56-364 | LRA02_26190 | hypothetical protein |
| 2620 | BKAM01000161.1 | GEP73752.1 | open | 339 [NA] | 112 [AA] | 505-843 | LRA02_26200 | hypothetical protein |
| 2621 | BKAM01000162.1 | GEP73753.1 | open | 309 [NA] | 102 [AA] | 460-768 | LRA02_26210 | transposase |