Genome Explorer: Limosilactobacillus fermentum 47-7 (SEQF9235.1)
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NCBI Annotation for SEQF9235.1
| Genome selected: Limosilactobacillus fermentum 47-7 | |||
| Contigs: | 1 | Bases: | 2098685 bps |
| CDS: | 112 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 57 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | CP017712.1 | AOY86561.1 | open | 1002 [NA] | 333 [AA] | 2043875-2044876 | BKD34_08800 | transcriptional regulator |
| 1502 | CP017712.1 | AOY86562.1 | open | 1455 [NA] | 484 [AA] | 2044904-2046358 | BKD34_08805 | galactose-1-phosphate uridylyltransferase |
| 1503 | CP017712.1 | AOY86563.1 | open | 1167 [NA] | 388 [AA] | 2046386-2047552 | BKD34_08810 | galactokinase |
| 1504 | CP017712.1 | AOY86564.1 | open | 951 [NA] | 316 [AA] | 2047724-2048674 | BKD34_08815 | hypothetical protein |
| 1505 | CP017712.1 | AOY86565.1 | open | 789 [NA] | 262 [AA] | 2048680-2049468 | BKD34_08820 | protein tyrosine phosphatase |
| 1506 | CP017712.1 | AOY86566.1 | open | 513 [NA] | 170 [AA] | 2049487-2049999 | BKD34_08825 | hypothetical protein |
| 1507 | CP017712.1 | AOY86567.1 | open | 225 [NA] | 74 [AA] | 2050012-2050236 | BKD34_08830 | hypothetical protein |
| 1508 | CP017712.1 | AOY86568.1 | open | 735 [NA] | 244 [AA] | 2050352-2051086 | BKD34_08835 | arginine ABC transporter ATP-binding protein ArtP |
| 1509 | CP017712.1 | AOY86569.1 | open | 690 [NA] | 229 [AA] | 2051088-2051777 | BKD34_08840 | cysteine ABC transporter permease |
| 1510 | CP017712.1 | AOY86570.1 | open | 801 [NA] | 266 [AA] | 2051880-2052680 | BKD34_08845 | amino acid ABC transporter substrate-binding protein |
| 1511 | CP017712.1 | AOY86571.1 | open | 327 [NA] | 108 [AA] | 2052819-2053145 | BKD34_08850 | hypothetical protein |
| 1512 | CP017712.1 | AOY86572.1 | open | 939 [NA] | 312 [AA] | 2053247-2054185 | BKD34_08855 | phosphoglycerate dehydrogenase |
| 1513 | CP017712.1 | AOY86573.1 | open | 483 [NA] | 160 [AA] | 2054187-2054669 | BKD34_08860 | transcription elongation factor GreA |
| 1514 | CP017712.1 | AOY86574.1 | open | 795 [NA] | 264 [AA] | 2054886-2055680 | BKD34_08865 | nicotinamide mononucleotide transporter |
| 1515 | CP017712.1 | AOY86575.1 | open | 510 [NA] | 169 [AA] | 2055787-2056296 | BKD34_08870 | O-acetyl-ADP-ribose deacetylase |
| 1516 | CP017712.1 | AOY86576.1 | open | 1905 [NA] | 634 [AA] | 2056305-2058209 | BKD34_08875 | peptidase M13 |
| 1517 | CP017712.1 | AOY86577.1 | open | 1311 [NA] | 436 [AA] | 2058469-2059779 | BKD34_08880 | guanine permease |
| 1518 | CP017712.1 | AOY86578.1 | open | 294 [NA] | 97 [AA] | 2059876-2060169 | BKD34_08885 | hypothetical protein |
| 1519 | CP017712.1 | AOY86579.1 | open | 1158 [NA] | 385 [AA] | 2060162-2061319 | BKD34_08890 | hypothetical protein |
| 1520 | CP017712.1 | AOY86580.1 | open | 1143 [NA] | 380 [AA] | 2061316-2062458 | BKD34_08895 | ATPase |
| 1521 | CP017712.1 | AOY86581.1 | open | 630 [NA] | 209 [AA] | 2062460-2063089 | BKD34_08900 | 3-methyladenine DNA glycosylase |
| 1522 | CP017712.1 | AOY86582.1 | open | 369 [NA] | 122 [AA] | 2063149-2063517 | BKD34_08905 | hypothetical protein |
| 1523 | CP017712.1 | AOY86583.1 | open | 186 [NA] | 61 [AA] | 2063808-2063993 | BKD34_08910 | hypothetical protein |
| 1524 | CP017712.1 | AOY86584.1 | open | 675 [NA] | 224 [AA] | 2063994-2064668 | BKD34_08915 | NAD(P)H oxidoreductase |
| 1525 | CP017712.1 | AOY86585.1 | open | 324 [NA] | 107 [AA] | 2064671-2064994 | BKD34_08920 | hypothetical protein |
| 1526 | CP017712.1 | AOY86586.1 | open | 627 [NA] | 208 [AA] | 2065088-2065714 | BKD34_08925 | NAD(P)H-hydrate epimerase |
| 1527 | CP017712.1 | AOY86587.1 | open | 558 [NA] | 185 [AA] | 2065895-2066452 | BKD34_08930 | elongation factor P |
| 1528 | CP017712.1 | AOY86588.1 | open | 633 [NA] | 210 [AA] | 2066599-2067231 | BKD34_08935 | hypothetical protein |
| 1529 | CP017712.1 | AOY86589.1 | open | 234 [NA] | 77 [AA] | 2067368-2067601 | BKD34_08940 | hypothetical protein |
| 1530 | CP017712.1 | AOY86590.1 | open | 999 [NA] | 332 [AA] | 2067598-2068596 | BKD34_08945 | LacI family transcriptional regulator |
| 1531 | CP017712.1 | AOY86591.1 | open | 2073 [NA] | 690 [AA] | 2069026-2071098 | BKD34_08950 | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
| 1532 | CP017712.1 | AOY86592.1 | open | 321 [NA] | 106 [AA] | 2071217-2071537 | BKD34_08955 | transcriptional regulator |
| 1533 | CP017712.1 | AOY86593.1 | open | 1287 [NA] | 428 [AA] | 2071782-2073068 | BKD34_08960 | ISL3 family transposase |
| 1534 | CP017712.1 | AOY86594.1 | open | 459 [NA] | 152 [AA] | 2073199-2073657 | BKD34_08965 | arginine repressor |
| 1535 | CP017712.1 | AOY86595.1 | open | 693 [NA] | 230 [AA] | 2073818-2074510 | BKD34_08970 | peptide ABC transporter ATP-binding protein |
| 1536 | CP017712.1 | AOY86596.1 | open | 1062 [NA] | 353 [AA] | 2074523-2075584 | BKD34_08975 | ABC transporter permease |
| 1537 | CP017712.1 | AOY86597.1 | open | 1011 [NA] | 336 [AA] | 2076267-2077277 | BKD34_08985 | alcohol dehydrogenase |
| 1538 | CP017712.1 | AOY86598.1 | open | 1563 [NA] | 520 [AA] | 2077573-2079135 | BKD34_08990 | divalent metal cation transporter |
| 1539 | CP017712.1 | AOY86599.1 | open | 744 [NA] | 247 [AA] | 2079510-2080253 | BKD34_08995 | hypothetical protein |
| 1540 | CP017712.1 | AOY86600.1 | open | 1806 [NA] | 601 [AA] | 2080569-2082374 | BKD34_09000 | threonine--tRNA ligase |
| 1541 | CP017712.1 | AOY86601.1 | open | 615 [NA] | 204 [AA] | 2082519-2083133 | BKD34_09005 | hypothetical protein |
| 1542 | CP017712.1 | AOY86602.1 | open | 879 [NA] | 292 [AA] | 2083139-2084017 | BKD34_09010 | hydroxyacid dehydrogenase |
| 1543 | CP017712.1 | AOY86603.1 | open | 1557 [NA] | 518 [AA] | 2084898-2086454 | BKD34_09020 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase |
| 1544 | CP017712.1 | AOY86604.1 | open | 1536 [NA] | 511 [AA] | 2086459-2087994 | BKD34_09025 | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase |
| 1545 | CP017712.1 | AOY86605.1 | open | 1911 [NA] | 636 [AA] | 2087994-2089904 | BKD34_09030 | asparagine synthase (glutamine-hydrolyzing) |
| 1546 | CP017712.1 | AOY86606.1 | open | 378 [NA] | 125 [AA] | 2091743-2092120 | BKD34_09040 | mechanosensitive ion channel protein MscL |
| 1547 | CP017712.1 | AOY86607.1 | open | 1905 [NA] | 634 [AA] | 2092380-2094284 | BKD34_09045 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG |
| 1548 | CP017712.1 | AOY86608.1 | open | 1389 [NA] | 462 [AA] | 2094299-2095687 | BKD34_09050 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE |
| 1549 | CP017712.1 | AOY86609.1 | open | 822 [NA] | 273 [AA] | 2095833-2096654 | BKD34_09055 | RNA-binding protein |
| 1550 | CP017712.1 | AOY86610.1 | open | 834 [NA] | 277 [AA] | 2096724-2097557 | BKD34_09060 | hypothetical protein |
| 1551 | CP017712.1 | AOY86611.1 | open | 345 [NA] | 114 [AA] | 2097573-2097917 | BKD34_09065 | ribonuclease P protein component |
| 1552 | CP017712.1 | AOY86612.1 | open | 444 [NA] | 147 [AA] | 2098241-2098684 | BKD34_09070 | hypothetical protein |
| 1553 | CP017712.1 | AOY86613.1 | open | 801 [NA] | 266 [AA] | 21027-21827 | BKD34_00100 | MBL fold metallo-hydrolase |
| 1554 | CP017712.1 | AOY86614.1 | open | 1149 [NA] | 382 [AA] | 70482-71630 | BKD34_00290 | succinyl-diaminopimelate desuccinylase |
| 1555 | CP017712.1 | AOY86615.1 | open | 339 [NA] | 112 [AA] | 179983-180321 | BKD34_00690 | alkylhydroperoxidase |
| 1556 | CP017712.1 | AOY86616.1 | open | 669 [NA] | 222 [AA] | 322083->322752 | BKD34_01240 | ribose 5-phosphate isomerase A |
| 1557 | CP017712.1 | AOY86617.1 | open | 540 [NA] | 179 [AA] | 323292-323831 | BKD34_01250 | dUTP diphosphatase |
| 1558 | CP017712.1 | AOY86618.1 | open | 1476 [NA] | 491 [AA] | 360614-362089 | BKD34_01435 | exopolyphosphatase |
| 1559 | CP017712.1 | AOY86619.1 | open | 726 [NA] | 241 [AA] | 375630-376355 | BKD34_01490 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB |
| 1560 | CP017712.1 | AOY86620.1 | open | 546 [NA] | 181 [AA] | 388747-389292 | BKD34_01580 | biotin transporter BioY |
| 1561 | CP017712.1 | AOY86621.1 | open | 999 [NA] | 332 [AA] | 404117-405115 | BKD34_01645 | peptide chain release factor 2 |
| 1562 | CP017712.1 | AOY86622.1 | open | 1017 [NA] | 338 [AA] | 407662-408678 | BKD34_01670 | glycerol-3-phosphate dehydrogenase |
| 1563 | CP017712.1 | AOY86623.1 | open | 819 [NA] | 272 [AA] | 458736-459554 | BKD34_01905 | hydrolase |
| 1564 | CP017712.1 | AOY86624.1 | open | 1062 [NA] | 353 [AA] | 604918-605979 | BKD34_02420 | recombinase RecA |
| 1565 | CP017712.1 | AOY86625.1 | open | 411 [NA] | 136 [AA] | 615329-615739 | BKD34_02455 | preprotein translocase subunit YajC |
| 1566 | CP017712.1 | AOY86626.1 | open | 213 [NA] | 70 [AA] | 687307-687519 | BKD34_02900 | cold-shock protein |
| 1567 | CP017712.1 | AOY86627.1 | open | 291 [NA] | 96 [AA] | 706746-707036 | BKD34_03005 | hypothetical protein |
| 1568 | CP017712.1 | AOY86628.1 | open | 231 [NA] | 76 [AA] | 753994-754224 | BKD34_03210 | hypothetical protein |
| 1569 | CP017712.1 | AOY86629.1 | open | 243 [NA] | 80 [AA] | 781368-781610 | BKD34_03275 | transposase |
| 1570 | CP017712.1 | AOY86630.1 | open | 234 [NA] | 77 [AA] | 831715-831948 | BKD34_03415 | hypothetical protein |
| 1571 | CP017712.1 | AOY86631.1 | open | 180 [NA] | 59 [AA] | 865137-865316 | BKD34_03565 | transposase |
| 1572 | CP017712.1 | AOY86632.1 | open | 576 [NA] | 191 [AA] | 863904-864479 | BKD34_03555 | transposase |
| 1573 | CP017712.1 | AOY86633.1 | open | 963 [NA] | 320 [AA] | 874612-875574 | BKD34_03605 | 2-dehydropantoate 2-reductase |
| 1574 | CP017712.1 | AOY86634.1 | open | 1038 [NA] | 345 [AA] | 910240-911277 | BKD34_03785 | riboflavin biosynthesis protein RibD |
| 1575 | CP017712.1 | AOY86635.1 | open | 576 [NA] | 191 [AA] | 915104-915679 | BKD34_03805 | transposase |
| 1576 | CP017712.1 | AOY86636.1 | open | 833 [NA] | 278 [AA] | <936662-937494 | BKD34_03875 | aryl-alcohol dehydrogenase |
| 1577 | CP017712.1 | AOY86637.1 | open | 1374 [NA] | 457 [AA] | 972900-974273 | BKD34_04010 | amino acid permease |
| 1578 | CP017712.1 | AOY86638.1 | open | 924 [NA] | 307 [AA] | 976276-977199 | BKD34_04025 | N-acetylmuramoyl-L-alanine amidase |
| 1579 | CP017712.1 | AOY86639.1 | open | 642 [NA] | 213 [AA] | 1078502-1079143 | BKD34_04500 | galactoside O-acetyltransferase |
| 1580 | CP017712.1 | AOY86640.1 | open | 285 [NA] | 94 [AA] | 1106527-1106811 | BKD34_04660 | hypothetical protein |
| 1581 | CP017712.1 | AOY86641.1 | open | 296 [NA] | 99 [AA] | <1120887-1121182 | BKD34_04670 | aromatic compound catabolic protein |
| 1582 | CP017712.1 | AOY86642.1 | open | 438 [NA] | 145 [AA] | 1164304-1164741 | BKD34_04860 | nucleoside-diphosphate kinase |
| 1583 | CP017712.1 | AOY86643.1 | open | 543 [NA] | 180 [AA] | 1164747-1165289 | BKD34_04865 | PadR family transcriptional regulator |
| 1584 | CP017712.1 | AOY86644.1 | open | 393 [NA] | 130 [AA] | 1193691-1194083 | BKD34_04980 | VOC family virulence protein |
| 1585 | CP017712.1 | AOY86645.1 | open | 645 [NA] | 214 [AA] | 1226856-1227500 | BKD34_05070 | NADH-flavin reductase |
| 1586 | CP017712.1 | AOY86646.1 | open | 3663 [NA] | 1220 [AA] | 1233772-1237434 | BKD34_05105 | nitrate reductase subunit alpha |
| 1587 | CP017712.1 | AOY86647.1 | open | 498 [NA] | 165 [AA] | 1240786-1241283 | BKD34_05125 | molybdenum cofactor biosynthesis protein C |
| 1588 | CP017712.1 | AOY86648.1 | open | 996 [NA] | 331 [AA] | 1252856-1253851 | BKD34_05215 | peptide ABC transporter substrate-binding protein |
| 1589 | CP017712.1 | AOY86649.1 | open | 885 [NA] | 294 [AA] | 1258266-1259150 | BKD34_05245 | multidrug transporter |
| 1590 | CP017712.1 | AOY86650.1 | open | 1443 [NA] | 480 [AA] | 1285134-1286576 | BKD34_05370 | MFS transporter |
| 1591 | CP017712.1 | AOY86651.1 | open | 876 [NA] | 291 [AA] | 1340902-1341777 | BKD34_05600 | pseudouridine synthase |
| 1592 | CP017712.1 | AOY86652.1 | open | 576 [NA] | 191 [AA] | 1351076-1351651 | BKD34_05650 | transposase |
| 1593 | CP017712.1 | AOY86653.1 | open | 1140 [NA] | 379 [AA] | 1356948-1358087 | BKD34_05680 | ATPase |
| 1594 | CP017712.1 | AOY86654.1 | open | 543 [NA] | 180 [AA] | 1378474->1379018 | BKD34_05770 | phosphate ABC transporter ATP-binding protein |
| 1595 | CP017712.1 | AOY86655.1 | open | 471 [NA] | 156 [AA] | 1381075-1381545 | BKD34_05780 | IS200/IS605 family transposase |
| 1596 | CP017712.1 | AOY86656.1 | open | 1374 [NA] | 457 [AA] | 1381596-1382969 | BKD34_05785 | RNA methyltransferase |
| 1597 | CP017712.1 | AOY86657.1 | open | 642 [NA] | 213 [AA] | 1432150-1432791 | BKD34_05975 | thiamine diphosphokinase |
| 1598 | CP017712.1 | AOY86658.1 | open | 513 [NA] | 170 [AA] | 1486553-1487065 | BKD34_06270 | nicotinate (nicotinamide) nucleotide adenylyltransferase |
| 1599 | CP017712.1 | AOY86659.1 | open | 450 [NA] | 149 [AA] | 1547081-1547530 | BKD34_06600 | acyl-CoA thioesterase |
| 1600 | CP017712.1 | AOY86660.1 | open | 2217 [NA] | 738 [AA] | 1553136-1555352 | BKD34_06635 | anaerobic ribonucleoside-triphosphate reductase |
| 1601 | CP017712.1 | AOY86661.1 | open | 585 [NA] | 194 [AA] | 1598457-1599041 | BKD34_06850 | muramidase |
| 1602 | CP017712.1 | AOY86662.1 | open | 1221 [NA] | 406 [AA] | 1612346-1613566 | BKD34_06895 | IS256 family transposase |
| 1603 | CP017712.1 | AOY86663.1 | open | 1320 [NA] | 439 [AA] | 1627916-1629235 | BKD34_06970 | helicase |
| 1604 | CP017712.1 | AOY86664.1 | open | 504 [NA] | 167 [AA] | 1647911-1648414 | BKD34_07075 | prolyl-tRNA editing protein |
| 1605 | CP017712.1 | AOY86665.1 | open | 1095 [NA] | 364 [AA] | 1651474-1652568 | BKD34_07090 | hypothetical protein |
| 1606 | CP017712.1 | AOY86666.1 | open | 1074 [NA] | 357 [AA] | 1678711-1679784 | BKD34_07205 | CamS family sex pheromone protein |
| 1607 | CP017712.1 | AOY86667.1 | open | 831 [NA] | 276 [AA] | 1692708-1693538 | BKD34_07270 | energy-coupling factor transporter ATPase |
| 1608 | CP017712.1 | AOY86668.1 | open | 804 [NA] | 267 [AA] | 1691073-1691876 | BKD34_07260 | cobalt ABC transporter ATP-binding protein |
| 1609 | CP017712.1 | AOY86669.1 | open | 381 [NA] | 126 [AA] | 1749410-1749790 | BKD34_07625 | transcriptional regulator |
| 1610 | CP017712.1 | AOY86670.1 | open | 1464 [NA] | 487 [AA] | 1750016-1751479 | BKD34_07630 | MFS transporter |
| 1611 | CP017712.1 | AOY86671.1 | open | 657 [NA] | 218 [AA] | 1765091-1765747 | BKD34_07670 | uracil-DNA glycosylase |
| 1612 | CP017712.1 | AOY86672.1 | open | 623 [NA] | 208 [AA] | 1782708->1783330 | BKD34_07755 | transposase |
| 1613 | CP017712.1 | AOY86673.1 | open | 843 [NA] | 280 [AA] | 1785105-1785947 | BKD34_07760 | transposase |
| 1614 | CP017712.1 | AOY86674.1 | open | 1011 [NA] | 336 [AA] | 1789003-1790013 | BKD34_07775 | alcohol dehydrogenase |
| 1615 | CP017712.1 | AOY86675.1 | open | 366 [NA] | 121 [AA] | 1836381-1836746 | BKD34_07995 | hypothetical protein |
| 1616 | CP017712.1 | AOY86676.1 | open | 1221 [NA] | 406 [AA] | 1866123-1867343 | BKD34_08120 | IS256 family transposase |
| 1617 | CP017712.1 | AOY86677.1 | open | 876 [NA] | 291 [AA] | 1873725-1874600 | BKD34_08150 | transporter |
| 1618 | CP017712.1 | AOY86678.1 | open | 912 [NA] | 303 [AA] | 1898036-1898947 | BKD34_08240 | prolyl aminopeptidase |
| 1619 | CP017712.1 | AOY86679.1 | open | 429 [NA] | 142 [AA] | 1905943-1906371 | BKD34_08270 | ribonucleotide reductase assembly protein NrdI |
| 1620 | CP017712.1 | AOY86680.1 | open | 876 [NA] | 291 [AA] | 1917343-1918218 | BKD34_08320 | fructokinase/branched chain amino acid--2-keto-4-methylthiobutyrate aminotransferase |
| 1621 | CP017712.1 | AOY86681.1 | open | 1938 [NA] | 645 [AA] | 1941948-1943885 | BKD34_08440 | sodium:proton antiporter |
| 1622 | CP017712.1 | AOY86682.1 | open | 819 [NA] | 272 [AA] | 1950867-1951685 | BKD34_08490 | paraslipin |
| 1623 | CP017712.1 | AOY86683.1 | open | 660 [NA] | 219 [AA] | 1960102-1960761 | BKD34_08530 | transposase |
| 1624 | CP017712.1 | AOY86684.1 | open | 576 [NA] | 191 [AA] | 2040700-2041275 | BKD34_08790 | transposase |
| 1625 | CP017712.1 | AOY86685.1 | open | 603 [NA] | 200 [AA] | 2075508-2076110 | BKD34_08980 | transcriptional regulator |
| 1626 | CP017712.1 | AOY86686.1 | open | 612 [NA] | 203 [AA] | 2084212-2084823 | BKD34_09015 | signal peptidase I |