Genome Explorer: Lacticaseibacillus casei BCRC 17487 (SEQF8783.1)
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NCBI Annotation for SEQF8783.1
| Genome selected: Lacticaseibacillus casei BCRC 17487 | |||
| Contigs: | 137 | Bases: | 2820150 bps |
| CDS: | 274 | rRNA: | 13 |
| tmRNA: | 1 | tRNA: | 56 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2501 | VBWL01000093.1 | TLF30093.1 | open | 1305 [NA] | 434 [AA] | 3960-5264 | FEI10_14000 | amino acid permease |
| 2502 | VBWL01000094.1 | TLF30086.1 | open | 144 [NA] | 47 [AA] | <1-144 | FEI10_14005 | IS30 family transposase |
| 2503 | VBWL01000094.1 | TLF30087.1 | open | 867 [NA] | 288 [AA] | 1069-1935 | FEI10_14015 | ketose-bisphosphate aldolase |
| 2504 | VBWL01000094.1 | TLF30088.1 | open | 1944 [NA] | 647 [AA] | 1973-3916 | FEI10_14020 | PTS fructose transporter subunit IIA |
| 2505 | VBWL01000094.1 | TLF30089.1 | open | 144 [NA] | 47 [AA] | 5405->5548 | FEI10_14030 | IS30 family transposase |
| 2506 | VBWL01000095.1 | TLF30058.1 | open | 384 [NA] | 127 [AA] | 794-1177 | FEI10_14035 | S1 RNA-binding domain-containing protein |
| 2507 | VBWL01000095.1 | TLF30059.1 | open | 585 [NA] | 194 [AA] | 1241-1825 | FEI10_14040 | peptidylprolyl isomerase |
| 2508 | VBWL01000095.1 | TLF30060.1 | open | 180 [NA] | 59 [AA] | 2067-2246 | FEI10_14045 | hypothetical protein |
| 2509 | VBWL01000095.1 | TLF30061.1 | open | 327 [NA] | 108 [AA] | 3173-3499 | FEI10_14050 | hypothetical protein |
| 2510 | VBWL01000095.1 | TLF30062.1 | open | 372 [NA] | 123 [AA] | 3775-4146 | FEI10_14055 | ABC transporter ATP-binding protein |
| 2511 | VBWL01000095.1 | TLF30063.1 | open | 987 [NA] | 328 [AA] | 4064-5050 | FEI10_14060 | ABC transporter ATP-binding protein |
| 2512 | VBWL01000096.1 | TLF30052.1 | open | 198 [NA] | 65 [AA] | 247-444 | FEI10_14065 | ComC/BlpC family peptide pheromone/bacteriocin |
| 2513 | VBWL01000096.1 | TLF30053.1 | open | 162 [NA] | 53 [AA] | 473-634 | FEI10_14070 | bacteriocin leader domain-containing protein |
| 2514 | VBWL01000096.1 | TLF30054.1 | open | 222 [NA] | 73 [AA] | 754-975 | FEI10_14075 | hypothetical protein |
| 2515 | VBWL01000096.1 | TLF30055.1 | open | 285 [NA] | 94 [AA] | 1241-1525 | FEI10_14080 | hypothetical protein |
| 2516 | VBWL01000096.1 | TLF30056.1 | open | 807 [NA] | 268 [AA] | 1706-2512 | FEI10_14085 | response regulator transcription factor |
| 2517 | VBWL01000096.1 | TLF30057.1 | open | 1302 [NA] | 433 [AA] | 2514-3815 | FEI10_14090 | sensor histidine kinase |
| 2518 | VBWL01000097.1 | TLF30023.1 | open | 396 [NA] | 131 [AA] | <1-396 | FEI10_14100 | DDE-type integrase/transposase/recombinase |
| 2519 | VBWL01000097.1 | TLF30024.1 | open | 750 [NA] | 249 [AA] | 1112-1861 | FEI10_14110 | DUF475 domain-containing protein |
| 2520 | VBWL01000097.1 | TLF30025.1 | open | 195 [NA] | 64 [AA] | 1927-2121 | FEI10_14115 | hypothetical protein |
| 2521 | VBWL01000098.1 | TLF30018.1 | open | 285 [NA] | 94 [AA] | 434-718 | FEI10_14125 | cytosolic protein |
| 2522 | VBWL01000098.1 | TLF30019.1 | open | 651 [NA] | 216 [AA] | 724-1374 | FEI10_14130 | recombinase family protein |
| 2523 | VBWL01000098.1 | TLF30020.1 | open | 369 [NA] | 122 [AA] | 1450-1818 | FEI10_14135 | YxeA family protein |
| 2524 | VBWL01000098.1 | TLF30021.1 | open | 282 [NA] | 93 [AA] | 2084-2365 | FEI10_14145 | type II toxin-antitoxin system YafQ family toxin |
| 2525 | VBWL01000098.1 | TLF30022.1 | open | 243 [NA] | 80 [AA] | 2358-2600 | FEI10_14150 | type II toxin-antitoxin system RelB/DinJ family antitoxin |
| 2526 | VBWL01000099.1 | TLF30012.1 | open | 294 [NA] | 97 [AA] | 1247-1540 | FEI10_14160 | phage gp6-like head-tail connector protein |
| 2527 | VBWL01000099.1 | TLF30013.1 | open | 141 [NA] | 46 [AA] | 2338-2478 | FEI10_14170 | hypothetical protein |
| 2528 | VBWL01000099.1 | TLF30014.1 | open | 249 [NA] | 82 [AA] | 2494-2742 | FEI10_14175 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2529 | VBWL01000099.1 | TLF30015.1 | open | 369 [NA] | 122 [AA] | 2854-3222 | FEI10_14180 | large-conductance mechanosensitive channel protein MscL |
| 2530 | VBWL01000099.1 | TLF30016.1 | open | 492 [NA] | 163 [AA] | 3494-3985 | FEI10_14185 | hypothetical protein |
| 2531 | VBWL01000099.1 | TLF30017.1 | open | 477 [NA] | 158 [AA] | 4182-4658 | FEI10_14190 | GNAT family N-acetyltransferase |
| 2532 | VBWL01000100.1 | TLF29986.1 | open | 144 [NA] | 47 [AA] | 4860->5003 | FEI10_14210 | IS30 family transposase |
| 2533 | VBWL01000101.1 | TLF29983.1 | open | 203 [NA] | 67 [AA] | <1-203 | FEI10_14215 | IS3 family transposase |
| 2534 | VBWL01000101.1 | TLF29984.1 | open | 1983 [NA] | 660 [AA] | 271-2253 | FEI10_14220 | phage tail protein |
| 2535 | VBWL01000101.1 | TLF29985.1 | open | 2619 [NA] | 872 [AA] | 2254->4874 | FEI10_14225 | phage tail protein |
| 2536 | VBWL01000102.1 | TLF29978.1 | open | 264 [NA] | 87 [AA] | <1-266 | FEI10_14230 | IS5/IS1182 family transposase |
| 2537 | VBWL01000102.1 | TLF29979.1 | open | 225 [NA] | 74 [AA] | 397-621 | FEI10_14235 | hypothetical protein |
| 2538 | VBWL01000102.1 | TLF29980.1 | open | 2946 [NA] | 981 [AA] | 712-3657 | FEI10_14240 | YhgE/Pip domain-containing protein |
| 2539 | VBWL01000102.1 | TLF29981.1 | open | 570 [NA] | 189 [AA] | 3665-4234 | FEI10_14245 | TetR/AcrR family transcriptional regulator |
| 2540 | VBWL01000102.1 | TLF29982.1 | open | 144 [NA] | 47 [AA] | 4489->4632 | FEI10_14250 | IS30 family transposase |
| 2541 | VBWL01000103.1 | TLF29954.1 | open | 1515 [NA] | 504 [AA] | 170-1684 | FEI10_14255 | hypothetical protein |
| 2542 | VBWL01000103.1 | TLF29955.1 | open | 2835 [NA] | 944 [AA] | 1685->4519 | FEI10_14260 | phage tail protein |
| 2543 | VBWL01000104.1 | TLF29949.1 | open | 1062 [NA] | 353 [AA] | 10-1071 | FEI10_14265 | IS30 family transposase |
| 2544 | VBWL01000104.1 | TLF29950.1 | open | 1608 [NA] | 535 [AA] | 1214-2821 | FEI10_14270 | ABC transporter ATP-binding protein |
| 2545 | VBWL01000104.1 | TLF29951.1 | open | 303 [NA] | 100 [AA] | 2818-3120 | FEI10_14275 | hypothetical protein |
| 2546 | VBWL01000104.1 | TLF29952.1 | open | 696 [NA] | 231 [AA] | 3449-4144 | FEI10_14280 | hypothetical protein |
| 2547 | VBWL01000104.1 | TLF29953.1 | open | 144 [NA] | 47 [AA] | 4284->4427 | FEI10_14285 | IS30 family transposase |
| 2548 | VBWL01000105.1 | TLF29755.1 | open | 171 [NA] | 56 [AA] | <1-172 | FEI10_14290 | transposase |
| 2549 | VBWL01000105.1 | TLF29756.1 | open | 345 [NA] | 114 [AA] | 326-670 | FEI10_14295 | replication and copy control-associated protein |
| 2550 | VBWL01000105.1 | TLF29757.1 | open | 816 [NA] | 271 [AA] | 673-1488 | FEI10_14300 | ParA family protein |
| 2551 | VBWL01000105.1 | TLF29758.1 | open | 1482 [NA] | 493 [AA] | 2033-3514 | FEI10_14305 | RepR protein |
| 2552 | VBWL01000106.1 | TLF29751.1 | open | 558 [NA] | 185 [AA] | 519-1076 | FEI10_14320 | serine acetyltransferase |
| 2553 | VBWL01000106.1 | TLF29752.1 | open | 1185 [NA] | 394 [AA] | 1042-2226 | FEI10_14325 | aminotransferase class V-fold PLP-dependent enzyme |
| 2554 | VBWL01000106.1 | TLF29753.1 | open | 912 [NA] | 303 [AA] | 2268-3179 | FEI10_14330 | cysteine synthase family protein |
| 2555 | VBWL01000106.1 | TLF29754.1 | open | 203 [NA] | 67 [AA] | 3677->3879 | FEI10_14335 | IS3 family transposase |
| 2556 | VBWL01000107.1 | TLF29731.1 | open | 321 [NA] | 106 [AA] | 537-857 | FEI10_14350 | thioredoxin family protein |
| 2557 | VBWL01000107.1 | TLF29732.1 | open | 777 [NA] | 258 [AA] | 854-1630 | FEI10_14355 | threonine/serine exporter family protein |
| 2558 | VBWL01000108.1 | TLF29729.1 | open | 276 [NA] | 91 [AA] | 3253->3528 | FEI10_14380 | IS30 family transposase |
| 2559 | VBWL01000108.1 | TLF29730.1 | open | 2703 [NA] | 900 [AA] | 426-3128 | FEI10_14375 | family 15 glucoamylase |
| 2560 | VBWL01000109.1 | TLF29707.1 | open | 144 [NA] | 47 [AA] | <1-144 | FEI10_14385 | IS30 family transposase |
| 2561 | VBWL01000109.1 | TLF29708.1 | open | 786 [NA] | 261 [AA] | 307-1092 | FEI10_14390 | hypothetical protein |
| 2562 | VBWL01000109.1 | TLF29709.1 | open | 501 [NA] | 166 [AA] | 1422-1922 | FEI10_14395 | hypothetical protein |
| 2563 | VBWL01000109.1 | TLF29710.1 | open | 1182 [NA] | 393 [AA] | 2040-3221 | FEI10_14400 | LysM peptidoglycan-binding domain-containing protein |
| 2564 | VBWL01000109.1 | TLF29711.1 | open | 243 [NA] | 80 [AA] | 3232->3476 | FEI10_14405 | phage holin |
| 2565 | VBWL01000111.1 | TLF29683.1 | open | 144 [NA] | 47 [AA] | <1-144 | FEI10_14430 | IS30 family transposase |
| 2566 | VBWL01000111.1 | TLF29684.1 | open | 267 [NA] | 88 [AA] | 1043-1309 | FEI10_14440 | helix-turn-helix transcriptional regulator |
| 2567 | VBWL01000111.1 | TLF29685.1 | open | 414 [NA] | 137 [AA] | 2405-2818 | FEI10_14450 | NUDIX domain-containing protein |
| 2568 | VBWL01000112.1 | TLF29681.1 | open | 171 [NA] | 56 [AA] | <1-172 | FEI10_14460 | transposase |
| 2569 | VBWL01000112.1 | TLF29682.1 | open | 888 [NA] | 295 [AA] | 1191-2078 | FEI10_14470 | sugar transporter |
| 2570 | VBWL01000113.1 | TLF29572.1 | open | 1137 [NA] | 378 [AA] | 1137->2274 | FEI10_14490 | ISL3 family transposase |
| 2571 | VBWL01000114.1 | TLF29541.1 | open | 610 [NA] | 203 [AA] | <1-610 | FEI10_14495 | phage tail protein |
| 2572 | VBWL01000114.1 | TLF29542.1 | open | 372 [NA] | 123 [AA] | 622-993 | FEI10_14500 | DUF806 family protein |
| 2573 | VBWL01000114.1 | TLF29543.1 | open | 420 [NA] | 139 [AA] | 990-1409 | FEI10_14505 | HK97 gp10 family phage protein |
| 2574 | VBWL01000114.1 | TLF29544.1 | open | 345 [NA] | 114 [AA] | 1412-1756 | FEI10_14510 | head-tail adaptor protein |
| 2575 | VBWL01000114.1 | TLF29545.1 | open | 345 [NA] | 114 [AA] | 1746-2090 | FEI10_14515 | phage gp6-like head-tail connector protein |
| 2576 | VBWL01000115.1 | TLF29537.1 | open | 294 [NA] | 98 [AA] | <1-294 | FEI10_14520 | hypothetical protein |
| 2577 | VBWL01000115.1 | TLF29538.1 | open | 132 [NA] | 43 [AA] | 325-456 | FEI10_14525 | XkdX family protein |
| 2578 | VBWL01000115.1 | TLF29539.1 | open | 291 [NA] | 96 [AA] | 449-739 | FEI10_14530 | hypothetical protein |
| 2579 | VBWL01000115.1 | TLF29540.1 | open | 1458 [NA] | 485 [AA] | 749->2208 | FEI10_14535 | phage tail protein |
| 2580 | VBWL01000116.1 | TLF29514.1 | open | 90 [NA] | 29 [AA] | 726-815 | FEI10_14550 | hypothetical protein |
| 2581 | VBWL01000116.1 | TLF29515.1 | open | 792 [NA] | 263 [AA] | 1002-1793 | FEI10_14555 | restriction endonuclease subunit S |
| 2582 | VBWL01000116.1 | TLF29516.1 | open | 144 [NA] | 47 [AA] | 1960->2103 | FEI10_14560 | IS30 family transposase |
| 2583 | VBWL01000117.1 | TLF29394.1 | open | 1680 [NA] | 559 [AA] | 190-1869 | FEI10_14570 | D-lactate dehydrogenase |
| 2584 | VBWL01000118.1 | TLF29374.1 | open | 1194 [NA] | 397 [AA] | 505-1698 | FEI10_14580 | FtsX-like permease family protein |
| 2585 | VBWL01000118.1 | TLF29375.1 | open | 231 [NA] | 77 [AA] | 1809->2039 | FEI10_14585 | transposase |
| 2586 | VBWL01000119.1 | TLF29369.1 | open | 141 [NA] | 46 [AA] | 284-424 | FEI10_14595 | hypothetical protein |
| 2587 | VBWL01000119.1 | TLF29370.1 | open | 252 [NA] | 83 [AA] | 436-687 | FEI10_14600 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2588 | VBWL01000119.1 | TLF29371.1 | open | 522 [NA] | 173 [AA] | 702-1223 | FEI10_14605 | Asp23/Gls24 family envelope stress response protein |
| 2589 | VBWL01000119.1 | TLF29372.1 | open | 186 [NA] | 61 [AA] | 1251-1436 | FEI10_14610 | DUF2273 domain-containing protein |
| 2590 | VBWL01000119.1 | TLF29373.1 | open | 105 [NA] | 34 [AA] | 1929->2034 | FEI10_14620 | IS30 family transposase |
| 2591 | VBWL01000120.1 | TLF29344.1 | open | 192 [NA] | 63 [AA] | <1-193 | FEI10_14625 | IS30 family transposase |
| 2592 | VBWL01000120.1 | TLF29345.1 | open | 1143 [NA] | 380 [AA] | 458-1600 | FEI10_14630 | glycosyltransferase family 4 protein |
| 2593 | VBWL01000120.1 | TLF29346.1 | open | 203 [NA] | 67 [AA] | 1673->1875 | FEI10_14635 | IS3 family transposase |
| 2594 | VBWL01000121.1 | TLF29343.1 | open | 1233 [NA] | 410 [AA] | 139-1371 | FEI10_14640 | IS110 family transposase |
| 2595 | VBWL01000123.1 | TLF29325.1 | open | 678 [NA] | 225 [AA] | 70-747 | FEI10_14650 | transposase |
| 2596 | VBWL01000123.1 | TLF29326.1 | open | 894 [NA] | 297 [AA] | 744-1637 | FEI10_14655 | IS3 family transposase |
| 2597 | VBWL01000125.1 | TLF29195.1 | open | 192 [NA] | 63 [AA] | <1-193 | FEI10_14675 | IS30 family transposase |
| 2598 | VBWL01000125.1 | TLF29196.1 | open | 837 [NA] | 278 [AA] | 320-1156 | FEI10_14680 | TIGR02391 family protein |
| 2599 | VBWL01000126.1 | TLF29192.1 | open | 144 [NA] | 47 [AA] | <1-144 | FEI10_14690 | IS30 family transposase |
| 2600 | VBWL01000126.1 | TLF29193.1 | open | 786 [NA] | 261 [AA] | 439-1224 | FEI10_14695 | SHOCT domain-containing protein |
| 2601 | VBWL01000126.1 | TLF29194.1 | open | 144 [NA] | 47 [AA] | 1407->1550 | FEI10_14700 | IS30 family transposase |
| 2602 | VBWL01000127.1 | TLF29189.1 | open | 141 [NA] | 46 [AA] | <1-141 | FEI10_14705 | IS30 family transposase |
| 2603 | VBWL01000127.1 | TLF29190.1 | open | 714 [NA] | 237 [AA] | 420-1133 | FEI10_14710 | LexA family transcriptional regulator |
| 2604 | VBWL01000127.1 | TLF29191.1 | open | 144 [NA] | 47 [AA] | 1289->1432 | FEI10_14715 | IS30 family transposase |
| 2605 | VBWL01000128.1 | TLF29168.1 | open | 249 [NA] | 82 [AA] | 476-724 | FEI10_14720 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 2606 | VBWL01000128.1 | TLF29169.1 | open | 94 [NA] | 31 [AA] | 1297->1390 | FEI10_14730 | IS5/IS1182 family transposase |
| 2607 | VBWL01000131.1 | TLF29150.1 | open | 1245 [NA] | 414 [AA] | 73->1317 | FEI10_14750 | phage tail protein |
| 2608 | VBWL01000132.1 | TLF29033.1 | open | 105 [NA] | 34 [AA] | <1-105 | FEI10_14755 | IS30 family transposase |
| 2609 | VBWL01000132.1 | TLF29034.1 | open | 144 [NA] | 47 [AA] | 1115->1258 | FEI10_14765 | IS30 family transposase |
| 2610 | VBWL01000133.1 | TLF29031.1 | open | 144 [NA] | 47 [AA] | <1-144 | FEI10_14770 | IS30 family transposase |
| 2611 | VBWL01000133.1 | TLF29032.1 | open | 420 [NA] | 139 [AA] | 295-714 | FEI10_14775 | DUF2992 family protein |
| 2612 | VBWL01000134.1 | TLF29009.1 | open | 180 [NA] | 59 [AA] | <1-181 | FEI10_14780 | hypothetical protein |
| 2613 | VBWL01000134.1 | TLF29010.1 | open | 330 [NA] | 109 [AA] | 183-512 | FEI10_14785 | hypothetical protein |
| 2614 | VBWL01000134.1 | TLF29011.1 | open | 126 [NA] | 41 [AA] | 509-634 | FEI10_14790 | XkdX family protein |
| 2615 | VBWL01000134.1 | TLF29012.1 | open | 294 [NA] | 98 [AA] | 683->976 | FEI10_14795 | hypothetical protein |
| 2616 | VBWL01000135.1 | TLF29008.1 | open | 192 [NA] | 63 [AA] | 715->907 | FEI10_14810 | IS30 family transposase |
| 2617 | VBWL01000136.1 | TLF28985.1 | open | 249 [NA] | 82 [AA] | 327-575 | FEI10_14815 | hypothetical protein |
| 2618 | VBWL01000137.1 | TLF28984.1 | open | 373 [NA] | 124 [AA] | 238->610 | FEI10_14820 | transposase |