Genome Explorer: Treponema pallidum LMNP-1 (SEQF8054.1)
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NCBI Annotation for SEQF8054.1
| Genome selected: Treponema pallidum LMNP-1 | |||
| Contigs: | 1 | Bases: | 1139772 bps |
| CDS: | 1059 | rRNA: | 6 |
| tmRNA: | 1 | tRNA: | 44 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | CP021113.1 | AWG41860.1 | open | 885 [NA] | 294 [AA] | 1072701-1073585 | TPELMNP1_0986 | DMT superfamily drug/metabolite transporter |
| 1002 | CP021113.1 | AWG41861.1 | open | 423 [NA] | 140 [AA] | 1073631-1074053 | TPELMNP1_0987 | hypothetical protein |
| 1003 | CP021113.1 | AWG41862.1 | open | 600 [NA] | 199 [AA] | 1074105-1074704 | TPELMNP1_0988 | MarC family multiple antibiotic resistance transporter |
| 1004 | CP021113.1 | AWG41863.1 | open | 873 [NA] | 290 [AA] | 1074740-1075612 | TPELMNP1_0989 | hypothetical protein |
| 1005 | CP021113.1 | AWG41864.1 | open | 234 [NA] | 77 [AA] | 1075419-1075652 | TPELMNP1_0989a | hypothetical protein |
| 1006 | CP021113.1 | AWG41865.1 | open | 3102 [NA] | 1033 [AA] | 1075659-1078760 | TPELMNP1_0990 | conserved hypothetical outer membrane protein |
| 1007 | CP021113.1 | AWG41866.1 | open | 159 [NA] | 52 [AA] | 1078824-1078982 | TPELMNP1_0991 | rubredoxin |
| 1008 | CP021113.1 | AWG41867.1 | open | 288 [NA] | 95 [AA] | 1079015-1079302 | TPELMNP1_0992 | hypothetical protein |
| 1009 | CP021113.1 | AWG41868.1 | open | 1026 [NA] | 341 [AA] | 1079371-1080396 | TPELMNP1_0993 | putative rare lipoprotein A |
| 1010 | CP021113.1 | AWG41869.1 | open | 297 [NA] | 98 [AA] | 1080590-1080886 | TPELMNP1_0993a | hypothetical protein |
| 1011 | CP021113.1 | AWG41870.1 | open | 810 [NA] | 269 [AA] | 1080752-1081561 | TPELMNP1_0994 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1012 | CP021113.1 | AWG41871.1 | open | 1335 [NA] | 444 [AA] | 1081643-1082977 | TPELMNP1_0995 | putative CAP family transcription factor |
| 1013 | CP021113.1 | AWG41872.1 | open | 1617 [NA] | 538 [AA] | 1083007-1084623 | TPELMNP1_0996 | hypothetical protein |
| 1014 | CP021113.1 | AWG41873.1 | open | 1797 [NA] | 598 [AA] | 1084780-1086576 | TPELMNP1_0997 | signal peptide peptidase SppA |
| 1015 | CP021113.1 | AWG41874.1 | open | 1389 [NA] | 462 [AA] | 1086610-1087998 | TPELMNP1_0998 | sodium/alanine symporter family protein |
| 1016 | CP021113.1 | AWG41875.1 | open | 2400 [NA] | 799 [AA] | 1088184-1090583 | TPELMNP1_0999 | S-DNA-T family septal DNA translocator |
| 1017 | CP021113.1 | AWG41876.1 | open | 672 [NA] | 223 [AA] | 1090761-1091432 | TPELMNP1_1000 | hypothetical protein |
| 1018 | CP021113.1 | AWG41877.1 | open | 1182 [NA] | 393 [AA] | 1091572-1092753 | TPELMNP1_1001 | hypothetical protein |
| 1019 | CP021113.1 | AWG41878.1 | open | 756 [NA] | 251 [AA] | 1092767-1093522 | TPELMNP1_1002 | hypothetical protein |
| 1020 | CP021113.1 | AWG41879.1 | open | 1038 [NA] | 345 [AA] | 1093630-1094667 | TPELMNP1_1003 | putative membrane protein |
| 1021 | CP021113.1 | AWG41880.1 | open | 606 [NA] | 201 [AA] | 1094690-1095295 | TPELMNP1_1004 | recombination protein RecR |
| 1022 | CP021113.1 | AWG41881.1 | open | 1719 [NA] | 572 [AA] | 1095369-1097087 | TPELMNP1_1005 | DNA-directed DNA polymerase III gamma and tau subunits |
| 1023 | CP021113.1 | AWG41882.1 | open | 1914 [NA] | 637 [AA] | 1097146-1099059 | TPELMNP1_1006 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1024 | CP021113.1 | AWG41883.1 | open | 837 [NA] | 278 [AA] | 1099168-1100004 | TPELMNP1_1007 | thymidylate synthase (FAD) |
| 1025 | CP021113.1 | AWG41884.1 | open | 2538 [NA] | 845 [AA] | 1100128-1102665 | TPELMNP1_1008 | ribonucleotide-diphosphate reductase subunit alpha |
| 1026 | CP021113.1 | AWG41885.1 | open | 1071 [NA] | 356 [AA] | 1102792-1103862 | TPELMNP1_1009 | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) |
| 1027 | CP021113.1 | AWG41886.1 | open | 450 [NA] | 149 [AA] | 1103959-1104408 | TPELMNP1_1010 | nucleoside-diphosphate kinase |
| 1028 | CP021113.1 | AWG41887.1 | open | 609 [NA] | 202 [AA] | 1104534-1105142 | TPELMNP1_1011 | aminoacyl-tRNA hydrolase |
| 1029 | CP021113.1 | AWG41888.1 | open | 936 [NA] | 311 [AA] | 1105177-1106112 | TPELMNP1_1012 | DNA-directed RNA polymerase sigma-70 factor |
| 1030 | CP021113.1 | AWG41889.1 | open | 267 [NA] | 88 [AA] | 1106317-1106583 | TPELMNP1_1013 | molecular chaperone GroES |
| 1031 | CP021113.1 | AWG41890.1 | open | 1935 [NA] | 644 [AA] | 1106594-1108528 | TPELMNP1_1014 | hypothetical protein |
| 1032 | CP021113.1 | AWG41891.1 | open | 426 [NA] | 141 [AA] | 1108494-1108919 | TPELMNP1_1015 | transcription antitermination protein NusB |
| 1033 | CP021113.1 | AWG41892.1 | open | 1086 [NA] | 361 [AA] | 1108916-1110001 | TPELMNP1_1016 | putative peptidylprolyl isomerase |
| 1034 | CP021113.1 | AWG41893.1 | open | 1818 [NA] | 605 [AA] | 1110074-1111891 | TPELMNP1_1017 | alanine--tRNA ligase |
| 1035 | CP021113.1 | AWG41894.1 | open | 192 [NA] | 63 [AA] | 1111936-1112127 | TPELMNP1_1017a | hypothetical protein |
| 1036 | CP021113.1 | AWG41895.1 | open | 1515 [NA] | 504 [AA] | 1112063-1113577 | TPELMNP1_1018 | hypothetical protein |
| 1037 | CP021113.1 | AWG41896.1 | open | 444 [NA] | 147 [AA] | 1113599-1114042 | TPELMNP1_1019 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
| 1038 | CP021113.1 | AWG41897.1 | open | 1521 [NA] | 506 [AA] | 1114043-1115563 | TPELMNP1_1020 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 1039 | CP021113.1 | AWG41898.1 | open | 1530 [NA] | 509 [AA] | 1115556-1117085 | TPELMNP1_1021 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
| 1040 | CP021113.1 | AWG41899.1 | open | 1368 [NA] | 455 [AA] | 1117181-1118548 | TPELMNP1_1022 | DNA repair protein RadA |
| 1041 | CP021113.1 | AWG41900.1 | open | 669 [NA] | 222 [AA] | 1118595-1119263 | TPELMNP1_1023 | recombination regulator RecX |
| 1042 | CP021113.1 | AWG41901.1 | open | 390 [NA] | 129 [AA] | 1119217-1119606 | TPELMNP1_1024 | 30S ribosomal protein S9 |
| 1043 | CP021113.1 | AWG41902.1 | open | 429 [NA] | 142 [AA] | 1119622-1120050 | TPELMNP1_1025 | 50S ribosomal protein L13 |
| 1044 | CP021113.1 | AWG41903.1 | open | 423 [NA] | 140 [AA] | 1120003-1120425 | TPELMNP1_1025a | hypothetical protein |
| 1045 | CP021113.1 | AWG41904.1 | open | 1770 [NA] | 589 [AA] | 1120483-1122252 | TPELMNP1_1026 | putative oligoendopeptidase F |
| 1046 | CP021113.1 | AWG41905.1 | open | 777 [NA] | 258 [AA] | 1122375-1123151 | TPELMNP1_1027 | uridine phosphorylase |
| 1047 | CP021113.1 | AWG41906.1 | open | 2013 [NA] | 670 [AA] | 1123167-1125179 | TPELMNP1_1028 | excision endonuclease subunit UvrD |
| 1048 | CP021113.1 | AWG41907.1 | open | 687 [NA] | 228 [AA] | 1125262-1125948 | TPELMNP1_1029 | hypothetical protein |
| 1049 | CP021113.1 | AWG41908.1 | open | 1671 [NA] | 556 [AA] | 1125989-1127659 | TPELMNP1_1031 | Tpr protein L |
| 1050 | CP021113.1 | AWG41909.1 | open | 435 [NA] | 144 [AA] | 1127727-1128161 | TPELMNP1_1032 | hypothetical protein |
| 1051 | CP021113.1 | AWG41910.1 | open | 936 [NA] | 311 [AA] | 1128173-1129108 | TPELMNP1_1033 | patatin family phospholipase |
| 1052 | CP021113.1 | AWG41911.1 | open | 1026 [NA] | 341 [AA] | 1129182-1130207 | TPELMNP1_1034 | CaCA family calcium (Ca2+):cation antiporter |
| 1053 | CP021113.1 | AWG41912.1 | open | 2871 [NA] | 956 [AA] | 1130204-1133074 | TPELMNP1_1035 | valine--tRNA ligase |
| 1054 | CP021113.1 | AWG41913.1 | open | 2379 [NA] | 792 [AA] | 1133227-1135605 | TPELMNP1_1036 | P-ATPase superfamily P-type ATPase transporter |
| 1055 | CP021113.1 | AWG41914.1 | open | 681 [NA] | 226 [AA] | 1135695-1136375 | TPELMNP1_1037 | putative hemolysin III |
| 1056 | CP021113.1 | AWG41915.1 | open | 534 [NA] | 177 [AA] | 1136570-1137103 | TPELMNP1_1038 | bacterioferrin |
| 1057 | CP021113.1 | AWG41916.1 | open | 543 [NA] | 180 [AA] | 1137360-1137902 | TPELMNP1_1039 | adenine phosphoribosyltransferase |
| 1058 | CP021113.1 | AWG41917.1 | open | 1056 [NA] | 351 [AA] | 1137925-1138980 | TPELMNP1_1040 | lysine--tRNA ligase |
| 1059 | CP021113.1 | AWG41918.1 | open | 600 [NA] | 199 [AA] | 1138980-1139579 | TPELMNP1_1041 | S14 family endopeptidase ClpP |