Genome Explorer: Bordetella pertussis UK39 (SEQF7934.1)
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NCBI Annotation for SEQF7934.1
| Genome selected: Bordetella pertussis UK39 | |||
| Contigs: | 1 | Bases: | 4108152 bps |
| CDS: | 329 | rRNA: | 9 |
| tmRNA: | 1 | tRNA: | 51 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3501 | CP031113.1 | AXK11522.1 | open | 564 [NA] | 187 [AA] | 2575910-2576473 | DVA63_12410 | OmpH family outer membrane protein |
| 3502 | CP031113.1 | AXK11523.1 | open | 477 [NA] | 158 [AA] | 2591545-2592021 | DVA63_12475 | disulfide bond formation protein B |
| 3503 | CP031113.1 | AXK11524.1 | open | 378 [NA] | 125 [AA] | 2596573-2596950 | DVA63_12500 | flagellar protein |
| 3504 | CP031113.1 | AXK11525.1 | open | 1017 [NA] | 338 [AA] | 2614190-2615206 | DVA63_12620 | IS110 family transposase IS1663 |
| 3505 | CP031113.1 | AXK11526.1 | open | 711 [NA] | 236 [AA] | 2631718-2632428 | DVA63_12695 | flagellar basal body P-ring formation protein FlgA |
| 3506 | CP031113.1 | AXK11527.1 | open | 1017 [NA] | 338 [AA] | 2639311-2640327 | DVA63_12725 | IS110 family transposase IS1663 |
| 3507 | CP031113.1 | AXK11528.1 | open | 681 [NA] | 226 [AA] | 2656562-2657242 | DVA63_12805 | GntR family transcriptional regulator |
| 3508 | CP031113.1 | AXK11529.1 | open | 723 [NA] | 240 [AA] | 2672950-2673672 | DVA63_12880 | alpha/beta hydrolase |
| 3509 | CP031113.1 | AXK11530.1 | open | 3342 [NA] | 1113 [AA] | 2677786-2681127 | DVA63_12900 | maltose alpha-D-glucosyltransferase |
| 3510 | CP031113.1 | AXK11531.1 | open | 2544 [NA] | 847 [AA] | 2688562-2691105 | DVA63_12925 | malto-oligosyltrehalose synthase |
| 3511 | CP031113.1 | AXK11532.1 | open | 498 [NA] | 165 [AA] | 2718086-2718583 | DVA63_13080 | DUF2384 domain-containing protein |
| 3512 | CP031113.1 | AXK11533.1 | open | 612 [NA] | 203 [AA] | 2720378-2720989 | DVA63_13100 | alpha/beta hydrolase |
| 3513 | CP031113.1 | AXK11534.1 | open | 1314 [NA] | 437 [AA] | 2725532-2726845 | DVA63_13125 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB |
| 3514 | CP031113.1 | AXK11535.1 | open | 447 [NA] | 148 [AA] | 2734716-2735162 | DVA63_13170 | glutamate racemase |
| 3515 | CP031113.1 | AXK11536.1 | open | 573 [NA] | 190 [AA] | 2761812-2762384 | DVA63_13265 | TIGR00730 family Rossman fold protein |
| 3516 | CP031113.1 | AXK11537.1 | open | 1005 [NA] | 334 [AA] | 2777774-2778778 | DVA63_13335 | GTP-binding protein |
| 3517 | CP031113.1 | AXK11538.1 | open | 1662 [NA] | 553 [AA] | 2790763-2792424 | DVA63_13415 | VWA domain-containing protein |
| 3518 | CP031113.1 | AXK11539.1 | open | 948 [NA] | 315 [AA] | 2801835-2802782 | DVA63_13475 | ATP-binding cassette domain-containing protein |
| 3519 | CP031113.1 | AXK11540.1 | open | 429 [NA] | 142 [AA] | 2828043-2828471 | DVA63_13605 | copper resistance protein NlpE |
| 3520 | CP031113.1 | AXK11541.1 | open | 975 [NA] | 324 [AA] | 2835294-2836268 | DVA63_13655 | LysR family transcriptional regulator |
| 3521 | CP031113.1 | AXK11542.1 | open | 354 [NA] | 117 [AA] | 2840816-2841169 | DVA63_13680 | hypothetical protein |
| 3522 | CP031113.1 | AXK11543.1 | open | 873 [NA] | 290 [AA] | 2853948-2854820 | DVA63_13745 | LysR family transcriptional regulator |
| 3523 | CP031113.1 | AXK11544.1 | open | 1701 [NA] | 566 [AA] | 2916990-2918690 | DVA63_14005 | single-stranded-DNA-specific exonuclease RecJ |
| 3524 | CP031113.1 | AXK11545.1 | open | 777 [NA] | 258 [AA] | 2959311-2960087 | DVA63_14195 | phosphate ABC transporter ATP-binding protein |
| 3525 | CP031113.1 | AXK11546.1 | open | 1422 [NA] | 473 [AA] | 2972309-2973730 | DVA63_14270 | uroporphyrinogen-III C-methyltransferase |
| 3526 | CP031113.1 | AXK11547.1 | open | 1017 [NA] | 338 [AA] | 2976877-2977893 | DVA63_14280 | IS110 family transposase IS1663 |
| 3527 | CP031113.1 | AXK11548.1 | open | 642 [NA] | 213 [AA] | 2978229-2978870 | DVA63_14285 | uracil phosphoribosyltransferase |
| 3528 | CP031113.1 | AXK11549.1 | open | 1017 [NA] | 338 [AA] | 2986515-2987531 | DVA63_14320 | IS110 family transposase IS1663 |
| 3529 | CP031113.1 | AXK11550.1 | open | 2349 [NA] | 782 [AA] | 3020289-3022637 | DVA63_14515 | DUF3141 domain-containing protein |
| 3530 | CP031113.1 | AXK11551.1 | open | 918 [NA] | 305 [AA] | 3051910-3052827 | DVA63_14625 | LysR family transcriptional regulator |
| 3531 | CP031113.1 | AXK11552.1 | open | 1017 [NA] | 338 [AA] | 3055751-3056767 | DVA63_14645 | IS110 family transposase IS1663 |
| 3532 | CP031113.1 | AXK11553.1 | open | 909 [NA] | 302 [AA] | 3064903-3065811 | DVA63_14690 | sulfate adenylyltransferase subunit CysD |
| 3533 | CP031113.1 | AXK11554.1 | open | 393 [NA] | 130 [AA] | 3099863-3100255 | DVA63_14865 | type II toxin-antitoxin system HicB family antitoxin |
| 3534 | CP031113.1 | AXK11555.1 | open | 828 [NA] | 275 [AA] | 3113770-3114597 | DVA63_14930 | aldo/keto reductase |
| 3535 | CP031113.1 | AXK11556.1 | open | 1017 [NA] | 338 [AA] | 3170542-3171558 | DVA63_15210 | IS110 family transposase IS1663 |
| 3536 | CP031113.1 | AXK11557.1 | open | 2049 [NA] | 682 [AA] | 3183683-3185731 | DVA63_15260 | hydantoinase/oxoprolinase family protein |
| 3537 | CP031113.1 | AXK11558.1 | open | 600 [NA] | 199 [AA] | 3201747-3202346 | DVA63_15340 | TetR/AcrR family transcriptional regulator |
| 3538 | CP031113.1 | AXK11559.1 | open | 1098 [NA] | 365 [AA] | 3246517-3247614 | DVA63_15530 | hypothetical protein |
| 3539 | CP031113.1 | AXK11560.1 | open | 180 [NA] | 59 [AA] | 3275598-3275777 | DVA63_15645 | hypothetical protein |
| 3540 | CP031113.1 | AXK11561.1 | open | 2445 [NA] | 814 [AA] | 3300771-3303215 | DVA63_15770 | TonB-dependent siderophore receptor |
| 3541 | CP031113.1 | AXK11562.1 | open | 1089 [NA] | 362 [AA] | 3332730-3333818 | DVA63_15905 | hypothetical protein |
| 3542 | CP031113.1 | AXK11563.1 | open | 1056 [NA] | 351 [AA] | 3369342-3370397 | DVA63_16155 | hypothetical protein |
| 3543 | CP031113.1 | AXK11564.1 | open | 612 [NA] | 203 [AA] | 3376931-3377542 | DVA63_16195 | LexA family transcriptional repressor |
| 3544 | CP031113.1 | AXK11565.1 | open | 756 [NA] | 251 [AA] | 3386769-3387524 | DVA63_16250 | hypothetical protein |
| 3545 | CP031113.1 | AXK11566.1 | open | 942 [NA] | 313 [AA] | 3405751-3406692 | DVA63_16345 | IS481 family transposase |
| 3546 | CP031113.1 | AXK11567.1 | open | 669 [NA] | 222 [AA] | 3415624-3416292 | DVA63_16395 | branched-chain amino acid ABC transporter permease |
| 3547 | CP031113.1 | AXK11568.1 | open | 894 [NA] | 297 [AA] | 3432420-3433313 | DVA63_16470 | LysR family transcriptional regulator |
| 3548 | CP031113.1 | AXK11569.1 | open | 402 [NA] | 133 [AA] | 3433447-3433848 | DVA63_16475 | DoxX family protein |
| 3549 | CP031113.1 | AXK11570.1 | open | 324 [NA] | 107 [AA] | 3498474-3498797 | DVA63_16800 | hypothetical protein |
| 3550 | CP031113.1 | AXK11571.1 | open | 291 [NA] | 96 [AA] | 3528485-3528775 | DVA63_16960 | DUF3579 domain-containing protein |
| 3551 | CP031113.1 | AXK11572.1 | open | 771 [NA] | 256 [AA] | 3534159-3534929 | DVA63_16995 | FadR family transcriptional regulator |
| 3552 | CP031113.1 | AXK11573.1 | open | 474 [NA] | 157 [AA] | 3594947-3595420 | DVA63_17280 | MaoC family dehydratase |
| 3553 | CP031113.1 | AXK11574.1 | open | 1401 [NA] | 466 [AA] | 3623765-3625165 | DVA63_17410 | PLP-dependent aminotransferase family protein |
| 3554 | CP031113.1 | AXK11575.1 | open | 351 [NA] | 116 [AA] | 3669005-3669355 | DVA63_17620 | rhodanese-like domain-containing protein |
| 3555 | CP031113.1 | AXK11576.1 | open | 615 [NA] | 204 [AA] | 3672917-3673531 | DVA63_17650 | ComF family protein |
| 3556 | CP031113.1 | AXK11577.1 | open | 777 [NA] | 258 [AA] | 3706301-3707077 | DVA63_17805 | aspartate dehydrogenase |
| 3557 | CP031113.1 | AXK11578.1 | open | 972 [NA] | 323 [AA] | 3782938-3783909 | DVA63_18220 | tripartite tricarboxylate transporter substrate binding protein |
| 3558 | CP031113.1 | AXK11579.1 | open | 1608 [NA] | 535 [AA] | 3796117-3797724 | DVA63_18285 | methylcrotonoyl-CoA carboxylase |
| 3559 | CP031113.1 | AXK11580.1 | open | 1473 [NA] | 490 [AA] | 3819987-3821459 | DVA63_18370 | aldehyde dehydrogenase family protein |
| 3560 | CP031113.1 | AXK11581.1 | open | 1017 [NA] | 338 [AA] | 3840095-3841111 | DVA63_18460 | IS110 family transposase IS1663 |
| 3561 | CP031113.1 | AXK11582.1 | open | 501 [NA] | 166 [AA] | 3891380-3891880 | DVA63_18765 | single-stranded DNA-binding protein |
| 3562 | CP031113.1 | AXK11583.1 | open | 504 [NA] | 167 [AA] | 3894273-3894776 | DVA63_18775 | hypothetical protein |
| 3563 | CP031113.1 | AXK11584.1 | open | 834 [NA] | 277 [AA] | 3897481-3898314 | DVA63_18800 | LysR family transcriptional regulator |
| 3564 | CP031113.1 | AXK11585.1 | open | 735 [NA] | 244 [AA] | 3940440-3941174 | DVA63_19020 | NAD(+) diphosphatase |
| 3565 | CP031113.1 | AXK11586.1 | open | 870 [NA] | 289 [AA] | 3950290-3951159 | DVA63_19065 | branched-chain amino acid ABC transporter permease |
| 3566 | CP031113.1 | AXK11587.1 | open | 1362 [NA] | 453 [AA] | 3951856-3953217 | DVA63_19075 | aromatic ring-hydroxylating dioxygenase subunit alpha |
| 3567 | CP031113.1 | AXK11588.1 | open | 222 [NA] | 73 [AA] | 3964078-3964299 | DVA63_19130 | DUF3717 domain-containing protein |
| 3568 | CP031113.1 | AXK11589.1 | open | 723 [NA] | 240 [AA] | 3967677-3968399 | DVA63_19155 | SURF1 family protein |
| 3569 | CP031113.1 | AXK11590.1 | open | 1125 [NA] | 374 [AA] | 4018523-4019647 | DVA63_19430 | type IV secretion system protein PtlG |
| 3570 | CP031113.1 | AXK11591.1 | open | 792 [NA] | 263 [AA] | 4022000-4022791 | DVA63_19450 | AraC family transcriptional regulator |
| 3571 | CP031113.1 | AXK11592.1 | open | 1023 [NA] | 340 [AA] | 4072022-4073044 | DVA63_19670 | CoA transferase |
| 3572 | CP031113.1 | AXK11593.1 | open | 1239 [NA] | 412 [AA] | 4081021-4082259 | DVA63_19715 | CoA transferase |