Genome Explorer: Stenotrophomonas maltophilia NCTC13014 (SEQF4350.1)
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NCBI Annotation for SEQF4350.1
| Genome selected: Stenotrophomonas maltophilia NCTC13014 | |||
| Contigs: | 1 | Bases: | 4592627 bps |
| CDS: | 4123 | rRNA: | 13 |
| tmRNA: | 1 | tRNA: | 81 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 4001 | LR134301.1 | VEE54453.1 | open | 726 [NA] | 241 [AA] | 4435780-4436505 | NCTC13014_04119 | ribonuclease PH |
| 4002 | LR134301.1 | VEE54454.1 | open | 861 [NA] | 286 [AA] | 4436630-4437490 | NCTC13014_04120 | protein YicC |
| 4003 | LR134301.1 | VEE54455.1 | open | 492 [NA] | 163 [AA] | 4438165-4438656 | NCTC13014_04121 | helix-turn-helix domain-containing protein |
| 4004 | LR134301.1 | VEE54456.1 | open | 1080 [NA] | 359 [AA] | 4438727-4439806 | NCTC13014_04122 | Selenide,water dikinase |
| 4005 | LR134301.1 | VEE54457.1 | open | 1932 [NA] | 643 [AA] | 4439953-4441884 | NCTC13014_04124 | Selenocysteine-specific translation elongation factor |
| 4006 | LR134301.1 | VEE54458.1 | open | 1479 [NA] | 492 [AA] | 4441881-4443359 | NCTC13014_04125 | L-seryl-tRNA(Sec) selenium transferase |
| 4007 | LR134301.1 | VEE54459.1 | open | 984 [NA] | 327 [AA] | 4443310-4444293 | NCTC13014_04126 | formate dehydrogenase formation protein FdhE |
| 4008 | LR134301.1 | VEE54460.1 | open | 648 [NA] | 215 [AA] | 4444695-4445342 | NCTC13014_04127 | formate dehydrogenase O subunit gamma |
| 4009 | LR134301.1 | VEE54461.1 | open | 918 [NA] | 305 [AA] | 4445339-4446256 | NCTC13014_04128 | formate dehydrogenase O subunit beta |
| 4010 | LR134301.1 | VEE54462.1 | open | 666 [NA] | 221 [AA] | 4449626-4450291 | NCTC13014_04130 | guanylate kinase |
| 4011 | LR134301.1 | VEE54463.1 | open | 300 [NA] | 99 [AA] | 4450402-4450701 | NCTC13014_04131 | DNA-directed RNA polymerase subunit omega |
| 4012 | LR134301.1 | VEE54464.1 | open | 2163 [NA] | 720 [AA] | 4450808-4452970 | NCTC13014_04132 | GTP pyrophosphokinase |
| 4013 | LR134301.1 | VEE54465.1 | open | 387 [NA] | 128 [AA] | 4453167-4453553 | NCTC13014_04133 | endoribonuclease L-PSP |
| 4014 | LR134301.1 | VEE54466.1 | open | 2112 [NA] | 703 [AA] | 4453561-4455672 | NCTC13014_04134 | ATP-dependent DNA helicase RecG |
| 4015 | LR134301.1 | VEE54467.1 | open | 939 [NA] | 312 [AA] | 4456053-4456991 | NCTC13014_04135 | inosine-uridine preferring nucleoside hydrolase |
| 4016 | LR134301.1 | VEE54468.1 | open | 243 [NA] | 80 [AA] | 4457080-4457322 | NCTC13014_04136 | 50S ribosomal protein L31 |
| 4017 | LR134301.1 | VEE54469.1 | open | 1278 [NA] | 425 [AA] | 4457619-4458896 | NCTC13014_04137 | Citrate synthase (si) |
| 4018 | LR134301.1 | VEE54470.1 | open | 1080 [NA] | 359 [AA] | 4459190-4460269 | NCTC13014_04138 | transmembrane protein |
| 4019 | LR134301.1 | VEE54471.1 | open | 837 [NA] | 278 [AA] | 4460492-4461328 | NCTC13014_04139 | AraC family transcriptional regulator |
| 4020 | LR134301.1 | VEE54472.1 | open | 765 [NA] | 254 [AA] | 4461359-4462123 | NCTC13014_04140 | alpha/beta hydrolase fold domain-containing protein |
| 4021 | LR134301.1 | VEE54473.1 | open | 498 [NA] | 165 [AA] | 4462612-4463109 | NCTC13014_04141 | alpha-fimbriae major subunit |
| 4022 | LR134301.1 | VEE54474.1 | open | 2262 [NA] | 753 [AA] | 4463170-4465431 | NCTC13014_04142 | outer membrane usher |
| 4023 | LR134301.1 | VEE54475.1 | open | 405 [NA] | 134 [AA] | 4465495-4465899 | NCTC13014_04143 | outermembrane fimbrial usher protein |
| 4024 | LR134301.1 | VEE54476.1 | open | 1134 [NA] | 377 [AA] | 4465896-4467029 | NCTC13014_04144 | CblD family pilus biogenesis initiator protein |
| 4025 | LR134301.1 | VEE54477.1 | open | 711 [NA] | 236 [AA] | 4467048-4467758 | NCTC13014_04145 | alpha-fimbriae chaperone protein |
| 4026 | LR134301.1 | VEE54478.1 | open | 3465 [NA] | 1154 [AA] | 4468425-4471889 | NCTC13014_04146 | YadA domain-containing protein |
| 4027 | LR134301.1 | VEE54479.1 | open | 750 [NA] | 249 [AA] | 4471959-4472708 | NCTC13014_04147 | transmembrane protein |
| 4028 | LR134301.1 | VEE54480.1 | open | 645 [NA] | 214 [AA] | 4472860-4473504 | NCTC13014_04148 | Predicted nucleotidyltransferase |
| 4029 | LR134301.1 | VEE54481.1 | open | 2424 [NA] | 807 [AA] | 4473717-4476140 | NCTC13014_04149 | multimodular transpeptidase-transglycosylase |
| 4030 | LR134301.1 | VEE54482.1 | open | 1059 [NA] | 352 [AA] | 4476360-4477418 | NCTC13014_04150 | type 4 fimbrial biogenesis protein PilM |
| 4031 | LR134301.1 | VEE54483.1 | open | 885 [NA] | 294 [AA] | 4477418-4478302 | NCTC13014_04151 | fimbrial assembly family protein |
| 4032 | LR134301.1 | VEE54484.1 | open | 657 [NA] | 218 [AA] | 4478299-4478955 | NCTC13014_04152 | type IV pilus biogenesis protein PilO |
| 4033 | LR134301.1 | VEE54485.1 | open | 537 [NA] | 178 [AA] | 4478952-4479488 | NCTC13014_04153 | type IV pilus biogenesis protein PilP |
| 4034 | LR134301.1 | VEE54486.1 | open | 1974 [NA] | 657 [AA] | 4479510-4481483 | NCTC13014_04154 | type IV pilus secretin PilQ |
| 4035 | LR134301.1 | VEE54487.1 | open | 1026 [NA] | 341 [AA] | 4481657-4482682 | NCTC13014_04155 | ATPase |
| 4036 | LR134301.1 | VEE54488.1 | open | 930 [NA] | 309 [AA] | 4482691-4483620 | NCTC13014_04156 | Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
| 4037 | LR134301.1 | VEE54489.1 | open | 450 [NA] | 149 [AA] | 4483617-4484066 | NCTC13014_04157 | transmembrane protein |
| 4038 | LR134301.1 | VEE54490.1 | open | 1005 [NA] | 334 [AA] | 4484063-4485067 | NCTC13014_04158 | BatA (Bacteroides aerotolerance operon) |
| 4039 | LR134301.1 | VEE54491.1 | open | 1824 [NA] | 607 [AA] | 4485064-4486887 | NCTC13014_04159 | transmembrane TPR repeat-containing protein |
| 4040 | LR134301.1 | VEE54492.1 | open | 1716 [NA] | 571 [AA] | 4486884-4488599 | NCTC13014_04160 | protein BatD |
| 4041 | LR134301.1 | VEE54493.1 | open | 1320 [NA] | 439 [AA] | 4488657-4489976 | NCTC13014_04161 | proton/glutamate symport protein Sodium/glutamate symport protein |
| 4042 | LR134301.1 | VEE54494.1 | open | 1998 [NA] | 665 [AA] | 4490191-4492188 | NCTC13014_04162 | transketolase |
| 4043 | LR134301.1 | VEE54495.1 | open | 279 [NA] | 92 [AA] | 4492497-4492775 | NCTC13014_04163 | plasmid maintenance system killer protein |
| 4044 | LR134301.1 | VEE54496.1 | open | 306 [NA] | 101 [AA] | 4492787-4493092 | NCTC13014_04164 | HigA protein (antitoxin to HigB) |
| 4045 | LR134301.1 | VEE54497.1 | open | 1953 [NA] | 650 [AA] | 4493178-4495130 | NCTC13014_04165 | acetyl-CoA hydrolase |
| 4046 | LR134301.1 | VEE54498.1 | open | 558 [NA] | 185 [AA] | 4495165-4495722 | NCTC13014_04166 | flavoredoxin |
| 4047 | LR134301.1 | VEE54499.1 | open | 366 [NA] | 121 [AA] | 4495841-4496206 | NCTC13014_04167 | transcriptional repressor, BlaI/MecI family |
| 4048 | LR134301.1 | VEE54500.1 | open | 1200 [NA] | 399 [AA] | 4496199-4497398 | NCTC13014_04168 | TonB family protein |
| 4049 | LR134301.1 | VEE54501.1 | open | 564 [NA] | 187 [AA] | 4497395-4497958 | NCTC13014_04169 | Uncharacterised protein |
| 4050 | LR134301.1 | VEE54502.1 | open | 801 [NA] | 266 [AA] | 4498022-4498822 | NCTC13014_04170 | beta-lactamase |
| 4051 | LR134301.1 | VEE54503.1 | open | 819 [NA] | 272 [AA] | 4498834-4499652 | NCTC13014_04171 | endonuclease |
| 4052 | LR134301.1 | VEE54504.1 | open | 630 [NA] | 209 [AA] | 4500281-4500910 | NCTC13014_04172 | Outer membrane protein W precursor |
| 4053 | LR134301.1 | VEE54505.1 | open | 1005 [NA] | 334 [AA] | 4501103-4502107 | NCTC13014_04173 | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase |
| 4054 | LR134301.1 | VEE54506.1 | open | 1377 [NA] | 458 [AA] | 4504911-4506287 | NCTC13014_04175 | transmembrane protein |
| 4055 | LR134301.1 | VEE54507.1 | open | 1176 [NA] | 391 [AA] | 4506930-4508105 | NCTC13014_04176 | phosphoglycerate kinase |
| 4056 | LR134301.1 | VEE54508.1 | open | 654 [NA] | 217 [AA] | 4508102-4508755 | NCTC13014_04177 | phosphoglycolate phosphatase |
| 4057 | LR134301.1 | VEE54509.1 | open | 1467 [NA] | 488 [AA] | 4508966-4510432 | NCTC13014_04178 | pyruvate kinase |
| 4058 | LR134301.1 | VEE54510.1 | open | 1005 [NA] | 334 [AA] | 4510712-4511716 | NCTC13014_04179 | Fructose-bisphosphate aldolase class I |
| 4059 | LR134301.1 | VEE54511.1 | open | 1143 [NA] | 380 [AA] | 4511846-4512988 | NCTC13014_04180 | Uncharacterised protein |
| 4060 | LR134301.1 | VEE54512.1 | open | 600 [NA] | 199 [AA] | 4513080-4513679 | NCTC13014_04181 | Macro domain, possibly ADP-ribose binding module |
| 4061 | LR134301.1 | VEE54513.1 | open | 960 [NA] | 319 [AA] | 4513890-4514849 | NCTC13014_04182 | cysteine synthase |
| 4062 | LR134301.1 | VEE54514.1 | open | 1026 [NA] | 341 [AA] | 4515015-4516040 | NCTC13014_04183 | Regulatory protein CysB |
| 4063 | LR134301.1 | VEE54515.1 | open | 909 [NA] | 302 [AA] | 4515902-4516810 | NCTC13014_04184 | Uncharacterised protein |
| 4064 | LR134301.1 | VEE54516.1 | open | 192 [NA] | 63 [AA] | 4516895-4517086 | NCTC13014_04185 | Protein of uncharacterised function (DUF2946) |
| 4065 | LR134301.1 | VEE54517.1 | open | 2064 [NA] | 687 [AA] | 4517158-4519221 | NCTC13014_04186 | outer membrane receptor proteins, mostly Fe transport |
| 4066 | LR134301.1 | VEE54518.1 | open | 1107 [NA] | 368 [AA] | 4519496-4520602 | NCTC13014_04187 | membrane fusion protein of RND family multidrug efflux pump |
| 4067 | LR134301.1 | VEE54519.1 | open | 3126 [NA] | 1041 [AA] | 4520599-4523724 | NCTC13014_04188 | RND multidrug efflux transporter Acriflavin resistance protein |
| 4068 | LR134301.1 | VEE54520.1 | open | 540 [NA] | 179 [AA] | 4523717-4524256 | NCTC13014_04189 | N-acetyltransferase GCN5 |
| 4069 | LR134301.1 | VEE54521.1 | open | 1518 [NA] | 505 [AA] | 4524437-4525954 | NCTC13014_04190 | transmembrane symporter |
| 4070 | LR134301.1 | VEE54522.1 | open | 1422 [NA] | 473 [AA] | 4526942-4528363 | NCTC13014_04192 | Aminopeptidase |
| 4071 | LR134301.1 | VEE54523.1 | open | 405 [NA] | 134 [AA] | 4528638-4529042 | NCTC13014_04193 | Large-conductance mechanosensitive channel |
| 4072 | LR134301.1 | VEE54524.1 | open | 717 [NA] | 238 [AA] | 4529097-4529813 | NCTC13014_04194 | fumarylacetoacetate (FAA) hydrolase |
| 4073 | LR134301.1 | VEE54525.1 | open | 282 [NA] | 93 [AA] | 4529889-4530170 | NCTC13014_04195 | transmembrane protein |
| 4074 | LR134301.1 | VEE54526.1 | open | 336 [NA] | 111 [AA] | 4530349-4530684 | NCTC13014_04196 | Rieske (2Fe-2S) domain-containing protein |
| 4075 | LR134301.1 | VEE54527.1 | open | 1848 [NA] | 615 [AA] | 4530994-4532841 | NCTC13014_04197 | sulfur deprivation response regulator |
| 4076 | LR134301.1 | VEE54528.1 | open | 735 [NA] | 244 [AA] | 4532869-4533603 | NCTC13014_04198 | tRNA (guanine46-N7-)-methyltransferase |
| 4077 | LR134301.1 | VEE54529.1 | open | 795 [NA] | 264 [AA] | 4533603-4534397 | NCTC13014_04199 | Thiazole biosynthesis protein ThiG |
| 4078 | LR134301.1 | VEE54530.1 | open | 201 [NA] | 66 [AA] | 4534504-4534704 | NCTC13014_04200 | sulfur carrier protein ThiS |
| 4079 | LR134301.1 | VEE54531.1 | open | 1836 [NA] | 611 [AA] | 4534912-4536747 | NCTC13014_04201 | phospholipase/lecithinase/hemolysin |
| 4080 | LR134301.1 | VEE54532.1 | open | 1506 [NA] | 501 [AA] | 4537043-4538548 | NCTC13014_04203 | Site-specific recombinase XerD |
| 4081 | LR134301.1 | VEE54533.1 | open | 429 [NA] | 142 [AA] | 4538715-4539143 | NCTC13014_04204 | Uncharacterised protein |
| 4082 | LR134301.1 | VEE54534.1 | open | 918 [NA] | 305 [AA] | 4539434-4540351 | NCTC13014_04205 | Uncharacterised protein |
| 4083 | LR134301.1 | VEE54535.1 | open | 1008 [NA] | 335 [AA] | 4540348-4541355 | NCTC13014_04206 | filamentation induced by cAMP protein fic |
| 4084 | LR134301.1 | VEE54536.1 | open | 921 [NA] | 306 [AA] | 4541946-4542866 | NCTC13014_04207 | Uncharacterised protein |
| 4085 | LR134301.1 | VEE54537.1 | open | 963 [NA] | 320 [AA] | 4543791-4544753 | NCTC13014_04208 | ribosomal protein S6 glutaminyl transferase |
| 4086 | LR134301.1 | VEE54538.1 | open | 477 [NA] | 158 [AA] | 4545001-4545477 | NCTC13014_04209 | Uncharacterised protein |
| 4087 | LR134301.1 | VEE54539.1 | open | 474 [NA] | 157 [AA] | 4545567-4546040 | NCTC13014_04210 | Uncharacterised protein |
| 4088 | LR134301.1 | VEE54540.1 | open | 678 [NA] | 225 [AA] | 4546049-4546726 | NCTC13014_04211 | two-component system regulatory protein |
| 4089 | LR134301.1 | VEE54541.1 | open | 1329 [NA] | 442 [AA] | 4546731-4548059 | NCTC13014_04212 | two-component system transmembrane sensor histidine kinase |
| 4090 | LR134301.1 | VEE54542.1 | open | 612 [NA] | 203 [AA] | 4548360-4548971 | NCTC13014_04213 | dephospho-CoA kinase |
| 4091 | LR134301.1 | VEE54543.1 | open | 864 [NA] | 287 [AA] | 4548983-4549846 | NCTC13014_04214 | Leader peptidase (Prepilin peptidase) |
| 4092 | LR134301.1 | VEE54544.1 | open | 1260 [NA] | 419 [AA] | 4549855-4551114 | NCTC13014_04215 | pilus-assembly protein |
| 4093 | LR134301.1 | VEE54545.1 | open | 438 [NA] | 145 [AA] | 4551476-4551913 | NCTC13014_04216 | fimbrial protein pilin |
| 4094 | LR134301.1 | VEE54546.1 | open | 876 [NA] | 291 [AA] | 4552012-4552887 | NCTC13014_04217 | Sterol desaturase |
| 4095 | LR134301.1 | VEE54547.1 | open | 3057 [NA] | 1018 [AA] | 4553019-4556075 | NCTC13014_04218 | Spermidine synthase |
| 4096 | LR134301.1 | VEE54548.1 | open | 1728 [NA] | 575 [AA] | 4556089-4557816 | NCTC13014_04219 | type IV pilus assembly protein |
| 4097 | LR134301.1 | VEE54549.1 | open | 1374 [NA] | 457 [AA] | 4557922-4559295 | NCTC13014_04220 | type IV fimbriae expression regulatory protein PilR |
| 4098 | LR134301.1 | VEE54550.1 | open | 1614 [NA] | 537 [AA] | 4559356-4560969 | NCTC13014_04221 | integral membrane sensor signal transduction histidine kinase |
| 4099 | LR134301.1 | VEE54551.1 | open | 1170 [NA] | 389 [AA] | 4561375-4562544 | NCTC13014_04222 | succinyl-CoA ligase subunit beta |
| 4100 | LR134301.1 | VEE54552.1 | open | 876 [NA] | 291 [AA] | 4562565-4563440 | NCTC13014_04223 | succinyl-CoA ligase subunit alpha |
| 4101 | LR134301.1 | VEE54553.1 | open | 1635 [NA] | 544 [AA] | 4563671-4565305 | NCTC13014_04224 | NAD synthetase |
| 4102 | LR134301.1 | VEE54554.1 | open | 1203 [NA] | 400 [AA] | 4565452-4566654 | NCTC13014_04225 | exported lipase |
| 4103 | LR134301.1 | VEE54555.1 | open | 870 [NA] | 289 [AA] | 4566857-4567726 | NCTC13014_04226 | competence lipoprotein |
| 4104 | LR134301.1 | VEE54556.1 | open | 990 [NA] | 329 [AA] | 4567858-4568847 | NCTC13014_04227 | ribosomal large subunit pseudouridine synthase D |
| 4105 | LR134301.1 | VEE54557.1 | open | 771 [NA] | 256 [AA] | 4568847-4569617 | NCTC13014_04228 | multi-copper polyphenol oxidoreductase, laccase |
| 4106 | LR134301.1 | VEE54558.1 | open | 507 [NA] | 168 [AA] | 4569638-4570144 | NCTC13014_04229 | Uncharacterised protein |
| 4107 | LR134301.1 | VEE54559.1 | open | 438 [NA] | 145 [AA] | 4570119-4570556 | NCTC13014_04230 | thiol-disulfide oxidoreductase DCC |
| 4108 | LR134301.1 | VEE54560.1 | open | 1302 [NA] | 433 [AA] | 4570653-4571954 | NCTC13014_04231 | flagellar motor rotation protein MotB |
| 4109 | LR134301.1 | VEE54561.1 | open | 1365 [NA] | 454 [AA] | 4572308-4573672 | NCTC13014_04232 | alpha,alpha-trehalose-phosphate synthase |
| 4110 | LR134301.1 | VEE54562.1 | open | 1782 [NA] | 593 [AA] | 4573669-4575450 | NCTC13014_04233 | glucoamylase |
| 4111 | LR134301.1 | VEE54563.1 | open | 759 [NA] | 252 [AA] | 4575490-4576248 | NCTC13014_04234 | Trehalose-6-phosphate phosphatase |
| 4112 | LR134301.1 | VEE54564.1 | open | 2436 [NA] | 811 [AA] | 4576486-4578921 | NCTC13014_04235 | ferric enterobactin receptor |
| 4113 | LR134301.1 | VEE54565.1 | open | 483 [NA] | 160 [AA] | 4579137-4579619 | NCTC13014_04236 | lipoprotein |
| 4114 | LR134301.1 | VEE54566.1 | open | 858 [NA] | 285 [AA] | 4579656-4580513 | NCTC13014_04237 | Uncharacterised protein |
| 4115 | LR134301.1 | VEE54567.1 | open | 1719 [NA] | 572 [AA] | 4580623-4582341 | NCTC13014_04238 | pyruvate dehydrogenase |
| 4116 | LR134301.1 | VEE54568.1 | open | 1611 [NA] | 536 [AA] | 4582944-4584554 | NCTC13014_04239 | sulfate transporter |
| 4117 | LR134301.1 | VEE54569.1 | open | 711 [NA] | 236 [AA] | 4584720-4585430 | NCTC13014_04240 | glutathione S-transferase |
| 4118 | LR134301.1 | VEE54570.1 | open | 822 [NA] | 273 [AA] | 4585601-4586422 | NCTC13014_04241 | transmembrane protein |
| 4119 | LR134301.1 | VEE54571.1 | open | 2586 [NA] | 861 [AA] | 4586604-4589189 | NCTC13014_04242 | clpB protein |
| 4120 | LR134301.1 | VEE54572.1 | open | 546 [NA] | 181 [AA] | 4589287-4589832 | NCTC13014_04243 | Uncharacterised protein |
| 4121 | LR134301.1 | VEE54573.1 | open | 801 [NA] | 266 [AA] | 4589873-4590673 | NCTC13014_04244 | MltA-interacting MipA |
| 4122 | LR134301.1 | VEE54574.1 | open | 1290 [NA] | 429 [AA] | 4590814-4592103 | NCTC13014_04245 | integral membrane sensor signal transduction histidine kinase |
| 4123 | LR134301.1 | VEE54575.1 | open | 471 [NA] | 156 [AA] | 4592100-4592570 | NCTC13014_04246 | transcriptional regulator RstA |