Genome Explorer: Prevotella bivia DNF00188 (SEQF2728.1)
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NCBI Annotation for SEQF2728.1
| Genome selected: Prevotella bivia DNF00188 | |||
| Contigs: | 158 | Bases: | 2527024 bps |
| CDS: | 2063 | rRNA: | 3 |
| tmRNA: | 0 | tRNA: | 38 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | JRNF01000113.1 | KGF17720.1 | open | 1098 [NA] | 365 [AA] | 410-1507 | HMPREF1651_11005 | hypothetical protein |
| 2002 | JRNF01000113.1 | KGF17721.1 | open | 1293 [NA] | 430 [AA] | 1593-2885 | HMPREF1651_11010 | integrase |
| 2003 | JRNF01000113.1 | KGF17722.1 | open | 324 [NA] | 108 [AA] | 3357->3680 | HMPREF1651_11015 | hypothetical protein |
| 2004 | JRNF01000114.1 | KGF17713.1 | open | 614 [NA] | 205 [AA] | <1-614 | HMPREF1651_11020 | ABC transporter ATP-binding protein |
| 2005 | JRNF01000114.1 | KGF17714.1 | open | 2298 [NA] | 765 [AA] | 645-2942 | HMPREF1651_11025 | hypothetical protein |
| 2006 | JRNF01000114.1 | KGF17715.1 | open | 669 [NA] | 222 [AA] | 2939->3609 | HMPREF1651_11030 | radical SAM protein |
| 2007 | JRNF01000115.1 | KGF17652.1 | open | 279 [NA] | 92 [AA] | <1-281 | HMPREF1651_11035 | excisionase |
| 2008 | JRNF01000115.1 | KGF17653.1 | open | 927 [NA] | 308 [AA] | 446-1372 | HMPREF1651_11040 | CAAX protease |
| 2009 | JRNF01000115.1 | KGF17654.1 | open | 606 [NA] | 201 [AA] | 1675-2280 | HMPREF1651_11045 | hypothetical protein |
| 2010 | JRNF01000115.1 | KGF17655.1 | open | 1017 [NA] | 338 [AA] | 2273-3289 | HMPREF1651_11050 | hypothetical protein |
| 2011 | JRNF01000115.1 | KGF17656.1 | open | 204 [NA] | 67 [AA] | 3377->3581 | HMPREF1651_11055 | hypothetical protein |
| 2012 | JRNF01000116.1 | KGF17575.1 | open | 1899 [NA] | 632 [AA] | <1-1900 | HMPREF1651_11060 | conjugal transfer protein TraG |
| 2013 | JRNF01000116.1 | KGF17576.1 | open | 1113 [NA] | 370 [AA] | 1925-3037 | HMPREF1651_11065 | hypothetical protein |
| 2014 | JRNF01000117.1 | KGF17560.1 | open | 591 [NA] | 196 [AA] | 367-957 | HMPREF1651_11070 | hypothetical protein |
| 2015 | JRNF01000118.1 | KGF17471.1 | open | 627 [NA] | 208 [AA] | 7-633 | HMPREF1651_11075 | TetR family transcriptional regulator |
| 2016 | JRNF01000119.1 | KGF17470.1 | open | 1713 [NA] | 570 [AA] | 324-2036 | HMPREF1651_11080 | hypothetical protein |
| 2017 | JRNF01000120.1 | KGF17321.1 | open | 564 [NA] | 187 [AA] | 1224-1787 | HMPREF1651_11095 | hypothetical protein |
| 2018 | JRNF01000121.1 | KGF17262.1 | open | 270 [NA] | 89 [AA] | <1-271 | HMPREF1651_11100 | hypothetical protein |
| 2019 | JRNF01000122.1 | KGF17252.1 | open | 723 [NA] | 240 [AA] | 161-883 | HMPREF1651_11105 | hypothetical protein |
| 2020 | JRNF01000122.1 | KGF17253.1 | open | 237 [NA] | 78 [AA] | 933-1169 | HMPREF1651_11110 | hypothetical protein |
| 2021 | JRNF01000123.1 | KGF17251.1 | open | 2370 [NA] | 789 [AA] | 15-2384 | HMPREF1651_11115 | hypothetical protein |
| 2022 | JRNF01000124.1 | KGF17062.1 | open | 1442 [NA] | 480 [AA] | <1-1442 | HMPREF1651_11120 | mobilization protein |
| 2023 | JRNF01000124.1 | KGF17063.1 | open | 390 [NA] | 129 [AA] | 1631-2020 | HMPREF1651_11125 | mobilization protein |
| 2024 | JRNF01000125.1 | KGF17058.1 | open | 690 [NA] | 230 [AA] | <1->691 | HMPREF1651_11130 | hypothetical protein |
| 2025 | JRNF01000126.1 | KGF17036.1 | open | 974 [NA] | 324 [AA] | <1-974 | HMPREF1651_11135 | hypothetical protein |
| 2026 | JRNF01000126.1 | KGF17037.1 | open | 219 [NA] | 72 [AA] | 1102-1320 | HMPREF1651_11140 | hypothetical protein |
| 2027 | JRNF01000127.1 | KGF16991.1 | open | 1284 [NA] | 427 [AA] | 92-1375 | HMPREF1651_11150 | recombinase |
| 2028 | JRNF01000127.1 | KGF16992.1 | open | 486 [NA] | 161 [AA] | 1431-1916 | HMPREF1651_11155 | hypothetical protein |
| 2029 | JRNF01000128.1 | KGF16978.1 | open | 1627 [NA] | 542 [AA] | 389->2015 | HMPREF1651_11165 | hypothetical protein |
| 2030 | JRNF01000129.1 | KGF16970.1 | open | 615 [NA] | 204 [AA] | 215-829 | HMPREF1651_11170 | TetR family transcriptional regulator |
| 2031 | JRNF01000129.1 | KGF16971.1 | open | 789 [NA] | 262 [AA] | 1045-1833 | HMPREF1651_11175 | SAM-dependent methyltransferase |
| 2032 | JRNF01000131.1 | KGF16859.1 | open | 954 [NA] | 317 [AA] | <1-955 | HMPREF1651_11185 | integrase |
| 2033 | JRNF01000131.1 | KGF16860.1 | open | 468 [NA] | 155 [AA] | 1008-1475 | HMPREF1651_11190 | hypothetical protein |
| 2034 | JRNF01000132.1 | KGF16820.1 | open | 246 [NA] | 81 [AA] | 88-333 | HMPREF1651_11195 | hypothetical protein |
| 2035 | JRNF01000132.1 | KGF16821.1 | open | 276 [NA] | 91 [AA] | 446-721 | HMPREF1651_11200 | hypothetical protein |
| 2036 | JRNF01000132.1 | KGF16822.1 | open | 312 [NA] | 103 [AA] | 857-1168 | HMPREF1651_11205 | hypothetical protein |
| 2037 | JRNF01000132.1 | KGF16823.1 | open | 291 [NA] | 96 [AA] | 1231->1523 | HMPREF1651_11210 | hypothetical protein |
| 2038 | JRNF01000133.1 | KGF16771.1 | open | 1056 [NA] | 351 [AA] | 155-1210 | HMPREF1651_11215 | transposase |
| 2039 | JRNF01000134.1 | KGF16721.1 | open | 456 [NA] | 151 [AA] | 211-666 | HMPREF1651_11220 | peptidase M15 |
| 2040 | JRNF01000135.1 | KGF16692.1 | open | 1143 [NA] | 380 [AA] | <1-1143 | HMPREF1651_11225 | transposase |
| 2041 | JRNF01000136.1 | KGF16624.1 | open | 952 [NA] | 317 [AA] | <1-952 | HMPREF1651_11230 | transposase |
| 2042 | JRNF01000137.1 | KGF16588.1 | open | 445 [NA] | 148 [AA] | <1-445 | HMPREF1651_11235 | maturase |
| 2043 | JRNF01000138.1 | KGF16460.1 | open | 393 [NA] | 130 [AA] | 344-736 | HMPREF1651_11240 | hypothetical protein |
| 2044 | JRNF01000139.1 | KGF16455.1 | open | 931 [NA] | 310 [AA] | <1-931 | HMPREF1651_11245 | hypothetical protein |
| 2045 | JRNF01000140.1 | KGF16363.1 | open | 720 [NA] | 239 [AA] | 15-734 | HMPREF1651_11250 | hypothetical protein |
| 2046 | JRNF01000140.1 | KGF16364.1 | open | 207 [NA] | 68 [AA] | 731-937 | HMPREF1651_11255 | hypothetical protein |
| 2047 | JRNF01000141.1 | KGF16339.1 | open | 252 [NA] | 83 [AA] | 322-573 | HMPREF1651_11265 | hypothetical protein |
| 2048 | JRNF01000142.1 | KGF16248.1 | open | 846 [NA] | 282 [AA] | <1->847 | HMPREF1651_11270 | transposase |
| 2049 | JRNF01000143.1 | KGF16228.1 | open | 846 [NA] | 282 [AA] | <1->847 | HMPREF1651_11275 | transposase |
| 2050 | JRNF01000144.1 | KGF16150.1 | open | 429 [NA] | 142 [AA] | 62-490 | HMPREF1651_11280 | hypothetical protein |
| 2051 | JRNF01000145.1 | KGF16087.1 | open | 833 [NA] | 277 [AA] | <1->835 | HMPREF1651_11285 | helicase |
| 2052 | JRNF01000146.1 | KGF16060.1 | open | 771 [NA] | 257 [AA] | <1-771 | HMPREF1651_11290 | transposase |
| 2053 | JRNF01000147.1 | KGF16041.1 | open | 372 [NA] | 123 [AA] | 408->779 | HMPREF1651_11300 | hypothetical protein |
| 2054 | JRNF01000148.1 | KGF16035.1 | open | 747 [NA] | 249 [AA] | <1->749 | HMPREF1651_11305 | ABC transporter ATP-binding protein |
| 2055 | JRNF01000150.1 | KGF16009.1 | open | 399 [NA] | 132 [AA] | 46-444 | HMPREF1651_11315 | hypothetical protein |
| 2056 | JRNF01000150.1 | KGF16010.1 | open | 244 [NA] | 81 [AA] | 475->718 | HMPREF1651_11320 | transposase |
| 2057 | JRNF01000151.1 | KGF15969.1 | open | 495 [NA] | 164 [AA] | 23-517 | HMPREF1651_11325 | hypothetical protein |
| 2058 | JRNF01000152.1 | KGF15965.1 | open | 469 [NA] | 156 [AA] | <1-469 | HMPREF1651_11330 | integrase |
| 2059 | JRNF01000153.1 | KGF15923.1 | open | 636 [NA] | 212 [AA] | <1->637 | HMPREF1651_11335 | hypothetical protein |
| 2060 | JRNF01000154.1 | KGF15894.1 | open | 345 [NA] | 115 [AA] | 288->632 | HMPREF1651_11340 | integrase |
| 2061 | JRNF01000155.1 | KGF15883.1 | open | 585 [NA] | 194 [AA] | <1-585 | HMPREF1651_11345 | hypothetical protein |
| 2062 | JRNF01000156.1 | KGF15821.1 | open | 581 [NA] | 193 [AA] | <1->583 | HMPREF1651_11350 | ABC transporter ATP-binding protein |
| 2063 | JRNF01000158.1 | KGF15786.1 | open | 512 [NA] | 170 [AA] | <1-512 | HMPREF1651_11355 | transposase |