Genome Explorer: Porphyromonas catoniae ATCC 51270 (SEQF2632.1)
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NCBI Annotation for SEQF2632.1
| Genome selected: Porphyromonas catoniae ATCC 51270 | |||
| Contigs: | 25 | Bases: | 2040170 bps |
| CDS: | 1597 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 46 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | JDFF01000025.1 | EWC91215.1 | open | 1386 [NA] | 461 [AA] | 106503-107888 | HMPREF0636_0121 | hypothetical protein |
| 1502 | JDFF01000025.1 | EWC91216.1 | open | 561 [NA] | 186 [AA] | 4832-5392 | HMPREF0636_0043 | ribosomal protein L5 |
| 1503 | JDFF01000025.1 | EWC91217.1 | open | 294 [NA] | 97 [AA] | 9366-9659 | HMPREF0636_0053 | ribosomal protein L23 |
| 1504 | JDFF01000025.1 | EWC91218.1 | open | 618 [NA] | 205 [AA] | 126868-127485 | HMPREF0636_0136 | SIS domain protein |
| 1505 | JDFF01000025.1 | EWC91219.1 | open | 1455 [NA] | 484 [AA] | 58668-60122 | HMPREF0636_0088 | Xaa-His dipeptidase |
| 1506 | JDFF01000025.1 | EWC91220.1 | open | 1668 [NA] | 555 [AA] | 19005-20672 | HMPREF0636_0062 | starch-binding protein, SusD-like family |
| 1507 | JDFF01000025.1 | EWC91221.1 | open | 1668 [NA] | 555 [AA] | 162102-163769 | HMPREF0636_0159 | type I phosphodiesterase/nucleotide pyrophosphatase |
| 1508 | JDFF01000025.1 | EWC91222.1 | open | 1500 [NA] | 499 [AA] | 158972-160471 | HMPREF0636_0157 | leucine rich repeat protein |
| 1509 | JDFF01000025.1 | EWC91223.1 | open | 258 [NA] | 85 [AA] | 6102-6359 | HMPREF0636_0046 | 30S ribosomal protein S17 |
| 1510 | JDFF01000025.1 | EWC91224.1 | open | 825 [NA] | 274 [AA] | 8533-9357 | HMPREF0636_0052 | ribosomal protein L2 |
| 1511 | JDFF01000025.1 | EWC91225.1 | open | 2406 [NA] | 801 [AA] | 135311-137716 | HMPREF0636_0143 | TonB-dependent receptor plug domain protein |
| 1512 | JDFF01000025.1 | EWC91226.1 | open | 366 [NA] | 121 [AA] | 5733-6098 | HMPREF0636_0045 | ribosomal protein L14 |
| 1513 | JDFF01000025.1 | EWC91227.1 | open | 1932 [NA] | 643 [AA] | 145196-147127 | HMPREF0636_0148 | starch-binding protein, SusD-like family |
| 1514 | JDFF01000025.1 | EWC91228.1 | open | 465 [NA] | 154 [AA] | 102062-102526 | HMPREF0636_0116 | nodulation efficiency protein NfeD |
| 1515 | JDFF01000025.1 | EWC91229.1 | open | 1623 [NA] | 540 [AA] | 40759-42381 | HMPREF0636_0073 | RNA methylase, PF01170 family |
| 1516 | JDFF01000025.1 | EWC91230.1 | open | 435 [NA] | 144 [AA] | 6578-7012 | HMPREF0636_0048 | ribosomal protein L16 |
| 1517 | JDFF01000025.1 | EWC91231.1 | open | 918 [NA] | 305 [AA] | 123326-124243 | HMPREF0636_0134 | 4-hydroxy-tetrahydrodipicolinate synthase |
| 1518 | JDFF01000025.1 | EWC91232.1 | open | 1266 [NA] | 421 [AA] | 116930-118195 | HMPREF0636_0129 | PF11026 family protein |
| 1519 | JDFF01000025.1 | EWC91233.1 | open | 765 [NA] | 254 [AA] | 31487-32251 | HMPREF0636_0067 | hypothetical protein |
| 1520 | JDFF01000025.1 | EWC91234.1 | open | 1839 [NA] | 612 [AA] | 124880-126718 | HMPREF0636_0135 | DEAD/DEAH box helicase |
| 1521 | JDFF01000025.1 | EWC91235.1 | open | 2508 [NA] | 835 [AA] | 130330-132837 | HMPREF0636_0140 | glycoside hydrolase, family 2, sugar binding domain protein |
| 1522 | JDFF01000025.1 | EWC91236.1 | open | 408 [NA] | 135 [AA] | 14145-14552 | HMPREF0636_0059 | ribosomal protein S12 |
| 1523 | JDFF01000025.1 | EWC91237.1 | open | 2652 [NA] | 883 [AA] | 164704-167355 | HMPREF0636_0161 | DNA mismatch repair protein MutS |
| 1524 | JDFF01000025.1 | EWC91238.1 | open | 702 [NA] | 233 [AA] | 37847-38548 | HMPREF0636_0071 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
| 1525 | JDFF01000025.1 | EWC91239.1 | open | 543 [NA] | 180 [AA] | 113613-114155 | HMPREF0636_0125 | NUDIX domain protein |
| 1526 | JDFF01000025.1 | EWC91240.1 | open | 1734 [NA] | 577 [AA] | 98343-100076 | HMPREF0636_0114 | hypothetical protein |
| 1527 | JDFF01000025.1 | EWC91241.1 | open | 753 [NA] | 250 [AA] | 68484-69236 | HMPREF0636_0095 | FeS assembly ATPase SufC |
| 1528 | JDFF01000025.1 | EWC91242.1 | open | 525 [NA] | 174 [AA] | 153238-153762 | HMPREF0636_0153 | peptidyl-prolyl cis-trans isomerase, FKBP-type |
| 1529 | JDFF01000025.1 | EWC91243.1 | open | 984 [NA] | 327 [AA] | 102545-103528 | HMPREF0636_0117 | SPFH domain/Band 7 family protein |
| 1530 | JDFF01000025.1 | EWC91244.1 | open | 1041 [NA] | 346 [AA] | 57589-58629 | HMPREF0636_0087 | membrane protein, PF03706 family |
| 1531 | JDFF01000025.1 | EWC91245.1 | open | 3024 [NA] | 1007 [AA] | 33761-36784 | HMPREF0636_0069 | TonB-linked outer membrane protein, SusC/RagA family |
| 1532 | JDFF01000025.1 | EWC91246.1 | open | 1845 [NA] | 614 [AA] | 316-2160 | HMPREF0636_0039 | excinuclease ABC, C subunit |
| 1533 | JDFF01000025.1 | EWC91247.1 | open | 1191 [NA] | 396 [AA] | 139321-140511 | HMPREF0636_0145 | PepSY domain protein |
| 1534 | JDFF01000025.1 | EWC91248.1 | open | 129 [NA] | 42 [AA] | 97765-97893 | HMPREF0636_0113 | hypothetical protein |
| 1535 | JDFF01000025.1 | EWC91249.1 | open | 669 [NA] | 222 [AA] | 103871-104539 | HMPREF0636_0119 | ribulose-phosphate 3-epimerase |
| 1536 | JDFF01000025.1 | EWC91250.1 | open | 351 [NA] | 116 [AA] | 127544-127894 | HMPREF0636_0137 | PF10825 family protein |
| 1537 | JDFF01000025.1 | EWC91251.1 | open | 1584 [NA] | 527 [AA] | 65196-66779 | HMPREF0636_0093 | ribonuclease Y |
| 1538 | JDFF01000025.1 | EWC91252.1 | open | 477 [NA] | 158 [AA] | 13416-13892 | HMPREF0636_0058 | ribosomal protein S7 |
| 1539 | JDFF01000025.1 | EWC91253.1 | open | 2661 [NA] | 886 [AA] | 27004-29664 | HMPREF0636_0065 | hypothetical protein |
| 1540 | JDFF01000025.1 | EWC91254.1 | open | 1470 [NA] | 489 [AA] | 157470-158939 | HMPREF0636_0156 | leucine rich repeat protein |
| 1541 | JDFF01000025.1 | EWC91255.1 | open | 129 [NA] | 42 [AA] | 103726-103854 | HMPREF0636_0118 | hypothetical protein |
| 1542 | JDFF01000025.1 | EWC91256.1 | open | 1098 [NA] | 365 [AA] | 43553-44650 | HMPREF0636_0077 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
| 1543 | JDFF01000025.1 | EWC91257.1 | open | 2760 [NA] | 919 [AA] | 82253-85012 | HMPREF0636_0103 | DNA-directed DNA polymerase |
| 1544 | JDFF01000025.1 | EWC91258.1 | open | 753 [NA] | 250 [AA] | 7035-7787 | HMPREF0636_0049 | ribosomal protein S3 |
| 1545 | JDFF01000025.1 | EWC91259.1 | open | 2094 [NA] | 697 [AA] | 38554-40647 | HMPREF0636_0072 | ATP-dependent DNA helicase RecG |
| 1546 | JDFF01000025.1 | EWC91260.1 | open | 876 [NA] | 291 [AA] | 163814-164689 | HMPREF0636_0160 | ribosomal protein L11 methyltransferase |
| 1547 | JDFF01000025.1 | EWC91261.1 | open | 942 [NA] | 313 [AA] | 80899-81840 | HMPREF0636_0102 | nitroreductase domain protein |
| 1548 | JDFF01000025.1 | EWC91262.1 | open | 849 [NA] | 282 [AA] | 133885-134733 | HMPREF0636_0142 | BRO family, N-terminal domain protein |
| 1549 | JDFF01000025.1 | EWC91263.1 | open | 879 [NA] | 292 [AA] | 48412-49290 | HMPREF0636_0080 | GyrI-like small molecule binding domain protein |
| 1550 | JDFF01000025.1 | EWC91264.1 | open | 1044 [NA] | 347 [AA] | 54977-56020 | HMPREF0636_0084 | alcohol dehydrogenase, catalytic domain protein, GroES-like family |
| 1551 | JDFF01000025.1 | EWC91265.1 | open | 1437 [NA] | 478 [AA] | 137755-139191 | HMPREF0636_0144 | PF14298 domain protein |
| 1552 | JDFF01000025.1 | EWC91266.1 | open | 1476 [NA] | 491 [AA] | 49562-51037 | HMPREF0636_0081 | starch-binding protein, SusD-like family |
| 1553 | JDFF01000025.1 | EWC91267.1 | open | 483 [NA] | 160 [AA] | 120879-121361 | HMPREF0636_0132 | sporulation and cell division repeat protein |
| 1554 | JDFF01000025.1 | EWC91268.1 | open | 336 [NA] | 111 [AA] | 64771-65106 | HMPREF0636_0092 | hypothetical protein |
| 1555 | JDFF01000025.1 | EWC91269.1 | open | 1293 [NA] | 430 [AA] | 128981-130273 | HMPREF0636_0139 | hypothetical protein |
| 1556 | JDFF01000025.1 | EWC91270.1 | open | 588 [NA] | 195 [AA] | 92673-93260 | HMPREF0636_0110 | putative major NAD(P)H-flavin oxidoreductase |
| 1557 | JDFF01000025.1 | EWC91271.1 | open | 306 [NA] | 101 [AA] | 10951-11256 | HMPREF0636_0056 | ribosomal protein S10 |
| 1558 | JDFF01000025.1 | EWC91272.1 | open | 1374 [NA] | 457 [AA] | 156028-157401 | HMPREF0636_0155 | leucine rich repeat protein |
| 1559 | JDFF01000025.1 | EWC91273.1 | open | 2691 [NA] | 896 [AA] | 24292-26982 | HMPREF0636_0064 | metallopeptidase family M12B Reprolysin-like domain protein |
| 1560 | JDFF01000025.1 | EWC91274.1 | open | 3114 [NA] | 1037 [AA] | 51037-54150 | HMPREF0636_0082 | TonB-linked outer membrane protein, SusC/RagA family |
| 1561 | JDFF01000025.1 | EWC91275.1 | open | 1380 [NA] | 459 [AA] | 45900-47279 | HMPREF0636_0079 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase |
| 1562 | JDFF01000025.1 | EWC91276.1 | open | 114 [NA] | 37 [AA] | 116591-116704 | HMPREF0636_0128 | hypothetical protein |
| 1563 | JDFF01000025.1 | EWC91277.1 | open | 1230 [NA] | 409 [AA] | 69244-70473 | HMPREF0636_0096 | FeS assembly protein SufD |
| 1564 | JDFF01000025.1 | EWC91278.1 | open | 1866 [NA] | 621 [AA] | 148511-150376 | HMPREF0636_0150 | carboxylase domain protein |
| 1565 | JDFF01000025.1 | EWC91279.1 | open | 216 [NA] | 71 [AA] | 37605-37820 | HMPREF0636_0070 | exodeoxyribonuclease VII, small subunit |
| 1566 | JDFF01000025.1 | EWC91280.1 | open | 3237 [NA] | 1078 [AA] | 85057-88293 | HMPREF0636_0104 | peptidase, S41 family |
| 1567 | JDFF01000025.1 | EWC91281.1 | open | 3216 [NA] | 1071 [AA] | 141960-145175 | HMPREF0636_0147 | TonB-linked outer membrane protein, SusC/RagA family |
| 1568 | JDFF01000025.1 | EWC91282.1 | open | 3711 [NA] | 1236 [AA] | 74999-78709 | HMPREF0636_0100 | putative phosphoribosylformylglycinamidine synthase |
| 1569 | JDFF01000025.1 | EWC91283.1 | open | 1014 [NA] | 337 [AA] | 78882-79895 | HMPREF0636_0101 | peptidase, M23 family |
| 1570 | JDFF01000025.1 | EWC91284.1 | open | 132 [NA] | 43 [AA] | 54280-54411 | HMPREF0636_0083 | hypothetical protein |
| 1571 | JDFF01000025.1 | EWC91285.1 | open | 759 [NA] | 252 [AA] | 152460-153218 | HMPREF0636_0152 | 5'/3'-nucleotidase SurE |
| 1572 | JDFF01000025.1 | EWC91286.1 | open | 888 [NA] | 295 [AA] | 60163-61050 | HMPREF0636_0089 | [acyl-carrier-protein] S-malonyltransferase |
| 1573 | JDFF01000025.1 | EWC91287.1 | open | 399 [NA] | 132 [AA] | 167406-167804 | HMPREF0636_0162 | acyl-CoA thioester hydrolase, YbgC/YbaW family |
| 1574 | JDFF01000025.1 | EWC91288.1 | open | 3090 [NA] | 1029 [AA] | 109382-112471 | HMPREF0636_0123 | putative beta-galactosidase |
| 1575 | JDFF01000025.1 | EWC91289.1 | open | 621 [NA] | 206 [AA] | 10309-10929 | HMPREF0636_0055 | 50S ribosomal protein L3 |
| 1576 | JDFF01000025.1 | EWC91290.1 | open | 636 [NA] | 211 [AA] | 9673-10308 | HMPREF0636_0054 | 50S ribosomal protein L4 |
| 1577 | JDFF01000025.1 | EWC91291.1 | open | 783 [NA] | 260 [AA] | 56688-57470 | HMPREF0636_0086 | ribosomal RNA small subunit methyltransferase A |
| 1578 | JDFF01000025.1 | EWC91292.1 | open | 579 [NA] | 192 [AA] | 140776-141354 | HMPREF0636_0146 | hypothetical protein |
| 1579 | JDFF01000025.1 | EWC91293.1 | open | 489 [NA] | 162 [AA] | 133046-133534 | HMPREF0636_0141 | putative DNA-binding protein |
| 1580 | JDFF01000025.1 | EWC91294.1 | open | 1560 [NA] | 519 [AA] | 121681-123240 | HMPREF0636_0133 | polysaccharide biosynthesis protein |
| 1581 | JDFF01000025.1 | EWC91295.1 | open | 126 [NA] | 41 [AA] | 14796-14921 | HMPREF0636_0060 | hypothetical protein |
| 1582 | JDFF01000025.1 | EWC91296.1 | open | 1263 [NA] | 420 [AA] | 160691-161953 | HMPREF0636_0158 | putative lipoprotein |
| 1583 | JDFF01000025.1 | EWC91297.1 | open | 2286 [NA] | 761 [AA] | 95323-97608 | HMPREF0636_0112 | carboxypeptidase regulatory-like domain protein |
| 1584 | JDFF01000025.1 | EWC91298.1 | open | 3048 [NA] | 1015 [AA] | 20675-23722 | HMPREF0636_0063 | TonB-linked outer membrane protein, SusC/RagA family |
| 1585 | JDFF01000025.1 | EWC91299.1 | open | 492 [NA] | 163 [AA] | 56176-56667 | HMPREF0636_0085 | acetyltransferase (GNAT) domain protein |
| 1586 | JDFF01000025.1 | EWC91300.1 | open | 2124 [NA] | 707 [AA] | 11277-13400 | HMPREF0636_0057 | translation elongation factor G |
| 1587 | JDFF01000025.1 | EWC91301.1 | open | 198 [NA] | 65 [AA] | 6372-6569 | HMPREF0636_0047 | ribosomal protein L29 |
| 1588 | JDFF01000025.1 | EWC91302.1 | open | 831 [NA] | 276 [AA] | 88920-89750 | HMPREF0636_0107 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase |
| 1589 | JDFF01000025.1 | EWC91303.1 | open | 342 [NA] | 113 [AA] | 128003-128344 | HMPREF0636_0138 | TM2 domain protein |
| 1590 | JDFF01000025.1 | EWC91304.1 | open | 1110 [NA] | 369 [AA] | 15421-16530 | HMPREF0636_0061 | beta protein |
| 1591 | JDFF01000025.1 | EWC91305.1 | open | 1491 [NA] | 496 [AA] | 104667-106157 | HMPREF0636_0120 | competence protein |
| 1592 | JDFF01000025.1 | EWC91306.1 | open | 1224 [NA] | 407 [AA] | 91149-92372 | HMPREF0636_0109 | ROK family protein |
| 1593 | JDFF01000025.1 | EWC91307.1 | open | 2361 [NA] | 786 [AA] | 61922-64282 | HMPREF0636_0090 | carboxypeptidase regulatory-like domain protein |
| 1594 | JDFF01000025.1 | EWC91308.1 | open | 321 [NA] | 106 [AA] | 5392-5712 | HMPREF0636_0044 | ribosomal protein L24 |
| 1595 | JDFF01000025.1 | EWC91309.1 | open | 750 [NA] | 249 [AA] | 147733-148482 | HMPREF0636_0149 | RNA methyltransferase, RsmE family |
| 1596 | JDFF01000025.1 | EWC91310.1 | open | 2382 [NA] | 793 [AA] | 71849-74230 | HMPREF0636_0098 | Cna protein B-type domain protein |
| 1597 | JDFF01000025.1 | EWC91311.1 | open | 900 [NA] | 299 [AA] | 112710-113609 | HMPREF0636_0124 | sodium Bile acid symporter family protein |