Genome Explorer: Phocaeicola abscessus F0290 (SEQF1646.1)
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NCBI Annotation for SEQF1646.1
| Genome selected: Phocaeicola abscessus F0290 | |||
| Contigs: | 30 | Bases: | 2502741 bps |
| CDS: | 2108 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 46 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | AUTU01000030.1 | EPT32919.1 | open | 1302 [NA] | 433 [AA] | 243274-244575 | HMPREF9012_2066 | DoxX family protein |
| 2002 | AUTU01000030.1 | EPT32920.1 | open | 1056 [NA] | 351 [AA] | 129340-130395 | HMPREF9012_1961 | hypothetical protein |
| 2003 | AUTU01000030.1 | EPT32921.1 | open | 258 [NA] | 85 [AA] | 246645-246902 | HMPREF9012_2070 | hypothetical protein |
| 2004 | AUTU01000030.1 | EPT32922.1 | open | 1197 [NA] | 398 [AA] | 346787-347983 | HMPREF9012_2150 | OmpA family protein |
| 2005 | AUTU01000030.1 | EPT32923.1 | open | 732 [NA] | 243 [AA] | 27677-28408 | HMPREF9012_1867 | hypothetical protein |
| 2006 | AUTU01000030.1 | EPT32924.1 | open | 1497 [NA] | 498 [AA] | 297012-298508 | HMPREF9012_2106 | 2-isopropylmalate synthase |
| 2007 | AUTU01000030.1 | EPT32925.1 | open | 588 [NA] | 195 [AA] | 250733-251320 | HMPREF9012_2075 | putative lipoprotein |
| 2008 | AUTU01000030.1 | EPT32926.1 | open | 1524 [NA] | 507 [AA] | 164234-165757 | HMPREF9012_1997 | hypothetical protein |
| 2009 | AUTU01000030.1 | EPT32927.1 | open | 909 [NA] | 302 [AA] | 119714-120622 | HMPREF9012_1952 | diaminopimelate dehydrogenase |
| 2010 | AUTU01000030.1 | EPT32928.1 | open | 288 [NA] | 95 [AA] | 212364-212651 | HMPREF9012_2031 | cell division protein ZapA |
| 2011 | AUTU01000030.1 | EPT32929.1 | open | 1089 [NA] | 362 [AA] | 87856-88944 | HMPREF9012_1927 | putative hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase |
| 2012 | AUTU01000030.1 | EPT32930.1 | open | 744 [NA] | 247 [AA] | 327039-327782 | HMPREF9012_2134 | putative shikimate dehydrogenase |
| 2013 | AUTU01000030.1 | EPT32931.1 | open | 1431 [NA] | 476 [AA] | 92418-93848 | HMPREF9012_1931 | pseudouridylate synthase |
| 2014 | AUTU01000030.1 | EPT32932.1 | open | 567 [NA] | 188 [AA] | 288465-289031 | HMPREF9012_2098 | RNA polymerase sigma-70 factor |
| 2015 | AUTU01000030.1 | EPT32933.1 | open | 1224 [NA] | 407 [AA] | 112906-114129 | HMPREF9012_1946 | cardiolipin synthetase |
| 2016 | AUTU01000030.1 | EPT32934.1 | open | 3087 [NA] | 1028 [AA] | 20563-23649 | HMPREF9012_1863 | TonB-linked outer membrane protein, SusC/RagA family |
| 2017 | AUTU01000030.1 | EPT32935.1 | open | 681 [NA] | 226 [AA] | 238688-239368 | HMPREF9012_2062 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
| 2018 | AUTU01000030.1 | EPT32936.1 | open | 3069 [NA] | 1022 [AA] | 158022-161090 | HMPREF9012_1993 | TonB-linked outer membrane protein, SusC/RagA family |
| 2019 | AUTU01000030.1 | EPT32937.1 | open | 201 [NA] | 66 [AA] | 135092-135292 | HMPREF9012_1967 | hypothetical protein |
| 2020 | AUTU01000030.1 | EPT32938.1 | open | 2352 [NA] | 783 [AA] | 272227-274578 | HMPREF9012_2085 | MacB-like periplasmic core domain protein |
| 2021 | AUTU01000030.1 | EPT32939.1 | open | 264 [NA] | 87 [AA] | 371610-371873 | HMPREF9012_2166 | hypothetical protein |
| 2022 | AUTU01000030.1 | EPT32940.1 | open | 435 [NA] | 144 [AA] | 45073-45507 | HMPREF9012_1881 | dUTP diphosphatase |
| 2023 | AUTU01000030.1 | EPT32941.1 | open | 1011 [NA] | 336 [AA] | 98232-99242 | HMPREF9012_1934 | lactate/malate dehydrogenase, NAD binding domain protein |
| 2024 | AUTU01000030.1 | EPT32942.1 | open | 612 [NA] | 203 [AA] | 124066-124677 | HMPREF9012_1957 | PF11810 domain protein |
| 2025 | AUTU01000030.1 | EPT32943.1 | open | 198 [NA] | 65 [AA] | 147865-148062 | HMPREF9012_1981 | hypothetical protein |
| 2026 | AUTU01000030.1 | EPT32944.1 | open | 1071 [NA] | 356 [AA] | 280664-281734 | HMPREF9012_2090 | radical SAM enzyme, rSAM/lipoprotein system |
| 2027 | AUTU01000030.1 | EPT32945.1 | open | 1707 [NA] | 568 [AA] | 198973-200679 | HMPREF9012_2023 | SusD family protein |
| 2028 | AUTU01000030.1 | EPT32946.1 | open | 309 [NA] | 102 [AA] | 223371-223679 | HMPREF9012_2045 | hypothetical protein |
| 2029 | AUTU01000030.1 | EPT32947.1 | open | 579 [NA] | 192 [AA] | 213995-214573 | HMPREF9012_2035 | hypothetical protein |
| 2030 | AUTU01000030.1 | EPT32948.1 | open | 1551 [NA] | 516 [AA] | 300492-302042 | HMPREF9012_2109 | HMGL-like protein |
| 2031 | AUTU01000030.1 | EPT32949.1 | open | 678 [NA] | 225 [AA] | 311104-311781 | HMPREF9012_2122 | RNA pseudouridine synthase |
| 2032 | AUTU01000030.1 | EPT32950.1 | open | 945 [NA] | 314 [AA] | 230302-231246 | HMPREF9012_2052 | helix-hairpin-helix domain protein |
| 2033 | AUTU01000030.1 | EPT32951.1 | open | 162 [NA] | 53 [AA] | 303990-304151 | HMPREF9012_2112 | hypothetical protein |
| 2034 | AUTU01000030.1 | EPT32952.1 | open | 1341 [NA] | 446 [AA] | 71765-73105 | HMPREF9012_1907 | RIP metalloprotease RseP |
| 2035 | AUTU01000030.1 | EPT32953.1 | open | 852 [NA] | 283 [AA] | 104221-105072 | HMPREF9012_1938 | putative rod shape-determining protein MreC |
| 2036 | AUTU01000030.1 | EPT32954.1 | open | 171 [NA] | 56 [AA] | 296520-296690 | HMPREF9012_2105 | hypothetical protein |
| 2037 | AUTU01000030.1 | EPT32955.1 | open | 210 [NA] | 69 [AA] | 180465-180674 | HMPREF9012_2008 | hypothetical protein |
| 2038 | AUTU01000030.1 | EPT32956.1 | open | 135 [NA] | 44 [AA] | 54233-54367 | HMPREF9012_1888 | hypothetical protein |
| 2039 | AUTU01000030.1 | EPT32957.1 | open | 489 [NA] | 162 [AA] | 148202-148690 | HMPREF9012_1982 | hypothetical protein |
| 2040 | AUTU01000030.1 | EPT32958.1 | open | 375 [NA] | 124 [AA] | 234333-234707 | HMPREF9012_2056 | thioesterase family protein |
| 2041 | AUTU01000030.1 | EPT32959.1 | open | 424 [NA] | 141 [AA] | <1-424 | HMPREF9012_1845 | Cna protein B-type domain protein |
| 2042 | AUTU01000030.1 | EPT32960.1 | open | 2001 [NA] | 666 [AA] | 15375-17375 | HMPREF9012_1858 | DNA gyrase, B subunit |
| 2043 | AUTU01000030.1 | EPT32961.1 | open | 1380 [NA] | 459 [AA] | 24715-26094 | HMPREF9012_1865 | cell division protein FtsZ |
| 2044 | AUTU01000030.1 | EPT32962.1 | open | 1404 [NA] | 467 [AA] | 90964-92367 | HMPREF9012_1930 | asparagine--tRNA ligase |
| 2045 | AUTU01000030.1 | EPT32963.1 | open | 828 [NA] | 275 [AA] | 47328-48155 | HMPREF9012_1883 | PF14125 domain protein |
| 2046 | AUTU01000030.1 | EPT32964.1 | open | 2964 [NA] | 987 [AA] | 170781-173744 | HMPREF9012_2000 | pyruvate phosphate dikinase, PEP/pyruvate-binding domain protein |
| 2047 | AUTU01000030.1 | EPT32965.1 | open | 738 [NA] | 245 [AA] | 326286-327023 | HMPREF9012_2133 | ubiquinone/menaquinone biosynthesis methyltransferase |
| 2048 | AUTU01000030.1 | EPT32966.1 | open | 1536 [NA] | 511 [AA] | 210722-212257 | HMPREF9012_2030 | ribonuclease Y |
| 2049 | AUTU01000030.1 | EPT32967.1 | open | 480 [NA] | 159 [AA] | 80280-80759 | HMPREF9012_1917 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
| 2050 | AUTU01000030.1 | EPT32968.1 | open | 1317 [NA] | 438 [AA] | 48155-49471 | HMPREF9012_1884 | peptidase, M23 family |
| 2051 | AUTU01000030.1 | EPT32969.1 | open | 1314 [NA] | 437 [AA] | 143746-145059 | HMPREF9012_1975 | oxidoreductase, NAD-binding domain protein |
| 2052 | AUTU01000030.1 | EPT32970.1 | open | 240 [NA] | 79 [AA] | 368788-369027 | HMPREF9012_2164 | SmpA/OmlA domain protein |
| 2053 | AUTU01000030.1 | EPT32971.1 | open | 1383 [NA] | 460 [AA] | 298513-299895 | HMPREF9012_2107 | 3-isopropylmalate dehydratase, large subunit |
| 2054 | AUTU01000030.1 | EPT32972.1 | open | 1344 [NA] | 447 [AA] | 140935-142278 | HMPREF9012_1973 | oxidoreductase, NAD-binding domain protein |
| 2055 | AUTU01000030.1 | EPT32973.1 | open | 567 [NA] | 188 [AA] | 77991-78557 | HMPREF9012_1914 | guanylate kinase |
| 2056 | AUTU01000030.1 | EPT32974.1 | open | 1110 [NA] | 369 [AA] | 65347-66456 | HMPREF9012_1899 | glycosyltransferase WbsX |
| 2057 | AUTU01000030.1 | EPT32975.1 | open | 207 [NA] | 68 [AA] | 178966-179172 | HMPREF9012_2007 | hypothetical protein |
| 2058 | AUTU01000030.1 | EPT32976.1 | open | 648 [NA] | 215 [AA] | 121526-122173 | HMPREF9012_1954 | PF11644 family protein |
| 2059 | AUTU01000030.1 | EPT32977.1 | open | 990 [NA] | 329 [AA] | 295487-296476 | HMPREF9012_2104 | xylose isomerase-like TIM barrel domain protein |
| 2060 | AUTU01000030.1 | EPT32978.1 | open | 1455 [NA] | 484 [AA] | 34998-36452 | HMPREF9012_1873 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase |
| 2061 | AUTU01000030.1 | EPT32979.1 | open | 669 [NA] | 222 [AA] | 248350-249018 | HMPREF9012_2072 | putative membrane protein |
| 2062 | AUTU01000030.1 | EPT32980.1 | open | 264 [NA] | 87 [AA] | 58837-59100 | HMPREF9012_1895 | hypothetical protein |
| 2063 | AUTU01000030.1 | EPT32981.1 | open | 573 [NA] | 190 [AA] | 153737-154309 | HMPREF9012_1988 | putative lipoprotein |
| 2064 | AUTU01000030.1 | EPT32982.1 | open | 1521 [NA] | 506 [AA] | 130447-131967 | HMPREF9012_1962 | YjeF family protein |
| 2065 | AUTU01000030.1 | EPT32983.1 | open | 411 [NA] | 136 [AA] | 356416-356826 | HMPREF9012_2154 | putative lipoprotein |
| 2066 | AUTU01000030.1 | EPT32984.1 | open | 1146 [NA] | 381 [AA] | 73126-74271 | HMPREF9012_1908 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
| 2067 | AUTU01000030.1 | EPT32985.1 | open | 3165 [NA] | 1054 [AA] | 189052-192216 | HMPREF9012_2016 | TonB-linked outer membrane protein, SusC/RagA family |
| 2068 | AUTU01000030.1 | EPT32986.1 | open | 1512 [NA] | 503 [AA] | 340027-341538 | HMPREF9012_2145 | peptidase, S41 family |
| 2069 | AUTU01000030.1 | EPT32987.1 | open | 789 [NA] | 262 [AA] | 227833-228621 | HMPREF9012_2049 | hypothetical protein |
| 2070 | AUTU01000030.1 | EPT32988.1 | open | 597 [NA] | 198 [AA] | 118972-119568 | HMPREF9012_1951 | Holliday junction DNA helicase RuvA |
| 2071 | AUTU01000030.1 | EPT32989.1 | open | 972 [NA] | 323 [AA] | 68170-69141 | HMPREF9012_1902 | N-acetyl-gamma-glutamyl-phosphate reductase |
| 2072 | AUTU01000030.1 | EPT32990.1 | open | 1533 [NA] | 510 [AA] | 251376-252908 | HMPREF9012_2076 | hypothetical protein |
| 2073 | AUTU01000030.1 | EPT32991.1 | open | 822 [NA] | 273 [AA] | 135322-136143 | HMPREF9012_1968 | ApbE domain protein |
| 2074 | AUTU01000030.1 | EPT32992.1 | open | 762 [NA] | 253 [AA] | 310335-311096 | HMPREF9012_2121 | 3-oxoacyl-[acyl-carrier-protein] reductase |
| 2075 | AUTU01000030.1 | EPT32993.1 | open | 3336 [NA] | 1111 [AA] | 165815-169150 | HMPREF9012_1998 | tetratricopeptide repeat protein |
| 2076 | AUTU01000030.1 | EPT32994.1 | open | 1839 [NA] | 612 [AA] | 359634-361472 | HMPREF9012_2157 | MutL C-terminal dimerization domain protein |
| 2077 | AUTU01000030.1 | EPT32995.1 | open | 1128 [NA] | 375 [AA] | 29778-30905 | HMPREF9012_1869 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
| 2078 | AUTU01000030.1 | EPT32996.1 | open | 1332 [NA] | 443 [AA] | 43615-44946 | HMPREF9012_1880 | putative dGTPase |
| 2079 | AUTU01000030.1 | EPT32997.1 | open | 1221 [NA] | 406 [AA] | 337164-338384 | HMPREF9012_2143 | tetratricopeptide repeat protein |
| 2080 | AUTU01000030.1 | EPT32998.1 | open | 957 [NA] | 318 [AA] | 152460-153416 | HMPREF9012_1987 | SusD family protein |
| 2081 | AUTU01000030.1 | EPT32999.1 | open | 639 [NA] | 212 [AA] | 214570-215208 | HMPREF9012_2036 | hypothetical protein |
| 2082 | AUTU01000030.1 | EPT33000.1 | open | 1212 [NA] | 403 [AA] | 69165-70376 | HMPREF9012_1903 | putative argininosuccinate synthase |
| 2083 | AUTU01000030.1 | EPT33001.1 | open | 159 [NA] | 52 [AA] | 157313-157471 | HMPREF9012_1990 | hypothetical protein |
| 2084 | AUTU01000030.1 | EPT33002.1 | open | 867 [NA] | 288 [AA] | 118109-118975 | HMPREF9012_1950 | hypothetical protein |
| 2085 | AUTU01000030.1 | EPT33003.1 | open | 1023 [NA] | 340 [AA] | 103188-104210 | HMPREF9012_1937 | cell shape determining protein, MreB/Mrl family |
| 2086 | AUTU01000030.1 | EPT33004.1 | open | 1137 [NA] | 378 [AA] | 67021-68157 | HMPREF9012_1901 | putative acetylornithine transaminase |
| 2087 | AUTU01000030.1 | EPT33005.1 | open | 1116 [NA] | 371 [AA] | 53040-54155 | HMPREF9012_1887 | putative peptide chain release factor 2 |
| 2088 | AUTU01000030.1 | EPT33006.1 | open | 666 [NA] | 221 [AA] | 134388-135053 | HMPREF9012_1966 | B3/4 domain protein |
| 2089 | AUTU01000030.1 | EPT33007.1 | open | 1305 [NA] | 434 [AA] | 279347-280651 | HMPREF9012_2089 | GHKL domain protein |
| 2090 | AUTU01000030.1 | EPT33008.1 | open | 465 [NA] | 154 [AA] | 313897-314361 | HMPREF9012_2125 | hypothetical protein |
| 2091 | AUTU01000030.1 | EPT33009.1 | open | 1530 [NA] | 509 [AA] | 26137-27666 | HMPREF9012_1866 | cell division protein FtsA |
| 2092 | AUTU01000030.1 | EPT33010.1 | open | 1356 [NA] | 451 [AA] | 275931-277286 | HMPREF9012_2087 | outer membrane efflux protein |
| 2093 | AUTU01000030.1 | EPT33011.1 | open | 462 [NA] | 153 [AA] | 304243-304704 | HMPREF9012_2113 | DNA-binding helix-turn-helix protein |
| 2094 | AUTU01000030.1 | EPT33012.1 | open | 2367 [NA] | 788 [AA] | 269837-272203 | HMPREF9012_2084 | MacB-like periplasmic core domain protein |
| 2095 | AUTU01000030.1 | EPT33013.1 | open | 777 [NA] | 258 [AA] | 194944-195720 | HMPREF9012_2021 | 5'-nucleotidase, C-terminal domain protein |
| 2096 | AUTU01000030.1 | EPT33014.1 | open | 2055 [NA] | 684 [AA] | 96144-98198 | HMPREF9012_1933 | DNA primase |
| 2097 | AUTU01000030.1 | EPT33015.1 | open | 1266 [NA] | 421 [AA] | 1742-3007 | HMPREF9012_1848 | oxidoreductase, NAD-binding domain protein |
| 2098 | AUTU01000030.1 | EPT33016.1 | open | 1038 [NA] | 345 [AA] | 324218-325255 | HMPREF9012_2131 | PhoH family protein |
| 2099 | AUTU01000030.1 | EPT33017.1 | open | 228 [NA] | 75 [AA] | 282524-282751 | HMPREF9012_2093 | hypothetical protein |
| 2100 | AUTU01000030.1 | EPT33018.1 | open | 576 [NA] | 191 [AA] | 85547-86122 | HMPREF9012_1924 | zeta toxin |
| 2101 | AUTU01000030.1 | EPT33019.1 | open | 1746 [NA] | 581 [AA] | 150353-152098 | HMPREF9012_1985 | PF13320 domain protein |
| 2102 | AUTU01000030.1 | EPT33020.1 | open | 543 [NA] | 180 [AA] | 242724-243266 | HMPREF9012_2065 | PF07659 domain protein |
| 2103 | AUTU01000030.1 | EPT33021.1 | open | 2097 [NA] | 698 [AA] | 239372-241468 | HMPREF9012_2063 | ATP-dependent DNA helicase RecG |
| 2104 | AUTU01000030.1 | EPT33022.1 | open | 468 [NA] | 155 [AA] | 39882-40349 | HMPREF9012_1877 | MraZ domain protein |
| 2105 | AUTU01000030.1 | EPT33023.1 | open | 450 [NA] | 149 [AA] | 245408-245857 | HMPREF9012_2068 | sporulation and cell division repeat protein |
| 2106 | AUTU01000030.1 | EPT33024.1 | open | 2913 [NA] | 970 [AA] | 59137-62049 | HMPREF9012_1896 | TonB-linked outer membrane protein, SusC/RagA family |
| 2107 | AUTU01000030.1 | EPT33025.1 | open | 114 [NA] | 37 [AA] | 289704-289817 | HMPREF9012_2101 | hypothetical protein |
| 2108 | AUTU01000030.1 | EPT33026.1 | open | 2682 [NA] | 893 [AA] | 12402-15083 | HMPREF9012_1856 | 4-alpha-glucanotransferase |