Genome Explorer: Fusobacterium necrophorum 1_1_36S (SEQF9979.1)
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PROKKA Annotation for SEQF9979.1
| Genome selected: Fusobacterium necrophorum 1_1_36S | |||
| Contigs: | 1 | Bases: | 2286018 bps |
| CDS: | 2119 | rRNA: | 17 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | SEQF9979.1_CP028107.1 | SEQF9979.1_02087 | open | 882 [NA] | 293 [AA] | 2160826-2161707 | hypothetical protein | |
| 2002 | SEQF9979.1_CP028107.1 | SEQF9979.1_02088 | open | 1359 [NA] | 452 [AA] | 2161721-2163079 | Putative dipeptidase | |
| 2003 | SEQF9979.1_CP028107.1 | SEQF9979.1_02089 | open | 735 [NA] | 244 [AA] | 2163080-2163814 | hypothetical protein | |
| 2004 | SEQF9979.1_CP028107.1 | SEQF9979.1_02090 | open | 1302 [NA] | 433 [AA] | 2163804-2165105 | hypothetical protein | |
| 2005 | SEQF9979.1_CP028107.1 | SEQF9979.1_02091 | open | 4353 [NA] | 1450 [AA] | 2165127-2169479 | polC_3 | DNA polymerase III PolC-type |
| 2006 | SEQF9979.1_CP028107.1 | SEQF9979.1_02092 | open | 567 [NA] | 188 [AA] | 2169479-2170045 | putative protein | |
| 2007 | SEQF9979.1_CP028107.1 | SEQF9979.1_02093 | open | 711 [NA] | 236 [AA] | 2170042-2170752 | trmD | tRNA (guanine-N(1)-)-methyltransferase |
| 2008 | SEQF9979.1_CP028107.1 | SEQF9979.1_02094 | open | 519 [NA] | 172 [AA] | 2170754-2171272 | rimM | Ribosome maturation factor RimM |
| 2009 | SEQF9979.1_CP028107.1 | SEQF9979.1_02095 | open | 240 [NA] | 79 [AA] | 2171283-2171522 | hypothetical protein | |
| 2010 | SEQF9979.1_CP028107.1 | SEQF9979.1_02096 | open | 246 [NA] | 81 [AA] | 2171537-2171782 | hypothetical protein | |
| 2011 | SEQF9979.1_CP028107.1 | SEQF9979.1_02097 | open | 807 [NA] | 268 [AA] | 2171772-2172578 | rsmA | Ribosomal RNA small subunit methyltransferase A |
| 2012 | SEQF9979.1_CP028107.1 | SEQF9979.1_02098 | open | 537 [NA] | 178 [AA] | 2172587-2173123 | hpt | Hypoxanthine phosphoribosyltransferase |
| 2013 | SEQF9979.1_CP028107.1 | SEQF9979.1_02099 | open | 708 [NA] | 235 [AA] | 2173274-2173981 | spk1 | Serinethreonine-protein kinase PK-1 |
| 2014 | SEQF9979.1_CP028107.1 | SEQF9979.1_02100 | open | 765 [NA] | 254 [AA] | 2174111-2174875 | rsgA | Small ribosomal subunit biogenesis GTPase RsgA |
| 2015 | SEQF9979.1_CP028107.1 | SEQF9979.1_02101 | open | 639 [NA] | 212 [AA] | 2174865-2175503 | rpe | Ribulose-phosphate 3-epimerase |
| 2016 | SEQF9979.1_CP028107.1 | SEQF9979.1_02102 | open | 675 [NA] | 224 [AA] | 2175516-2176190 | hypothetical protein | |
| 2017 | SEQF9979.1_CP028107.1 | SEQF9979.1_02103 | open | 1602 [NA] | 533 [AA] | 2176205-2177806 | rqcH | Rqc2 RqcH |
| 2018 | SEQF9979.1_CP028107.1 | SEQF9979.1_02104 | open | 639 [NA] | 212 [AA] | 2177803-2178441 | hypothetical protein | |
| 2019 | SEQF9979.1_CP028107.1 | SEQF9979.1_02105 | open | 1260 [NA] | 419 [AA] | 2178493-2179752 | hypothetical protein | |
| 2020 | SEQF9979.1_CP028107.1 | SEQF9979.1_02106 | open | 858 [NA] | 285 [AA] | 2179953-2180810 | cvfB | Conserved virulence factor B |
| 2021 | SEQF9979.1_CP028107.1 | SEQF9979.1_02107 | open | 330 [NA] | 109 [AA] | 2180823-2181152 | hypothetical protein | |
| 2022 | SEQF9979.1_CP028107.1 | SEQF9979.1_02108 | open | 642 [NA] | 213 [AA] | 2181140-2181781 | btuD_3 | Vitamin B12 import ATP-binding protein BtuD |
| 2023 | SEQF9979.1_CP028107.1 | SEQF9979.1_02109 | open | 750 [NA] | 249 [AA] | 2181753-2182502 | hypothetical protein | |
| 2024 | SEQF9979.1_CP028107.1 | SEQF9979.1_02110 | open | 933 [NA] | 310 [AA] | 2182492-2183424 | hypothetical protein | |
| 2025 | SEQF9979.1_CP028107.1 | SEQF9979.1_02111 | open | 1182 [NA] | 393 [AA] | 2183568-2184749 | sstT | Serinethreonine transporter SstT |
| 2026 | SEQF9979.1_CP028107.1 | SEQF9979.1_02112 | open | 1785 [NA] | 594 [AA] | 2184956-2186740 | hflX | GTPase HflX |
| 2027 | SEQF9979.1_CP028107.1 | SEQF9979.1_02113 | open | 1338 [NA] | 445 [AA] | 2186749-2188086 | yeeO_4 | putative FMNFAD exporter YeeO |
| 2028 | SEQF9979.1_CP028107.1 | SEQF9979.1_02114 | open | 510 [NA] | 169 [AA] | 2188214-2188723 | nrdG | Anaerobic ribonucleoside-triphosphate reductase-activating protein |
| 2029 | SEQF9979.1_CP028107.1 | SEQF9979.1_02115 | open | 2205 [NA] | 734 [AA] | 2188739-2190943 | nrdD | Anaerobic ribonucleoside-triphosphate reductase |
| 2030 | SEQF9979.1_CP028107.1 | SEQF9979.1_02116 | open | 990 [NA] | 329 [AA] | 2191122-2192111 | fba | Fructose-bisphosphate aldolase |
| 2031 | SEQF9979.1_CP028107.1 | SEQF9979.1_02117 | open | 489 [NA] | 162 [AA] | 2192127-2192615 | hypothetical protein | |
| 2032 | SEQF9979.1_CP028107.1 | SEQF9979.1_02118 | open | 1275 [NA] | 424 [AA] | 2192602-2193876 | serS | Serine--tRNA ligase |
| 2033 | SEQF9979.1_CP028107.1 | SEQF9979.1_02119 | open | 615 [NA] | 204 [AA] | 2193870-2194484 | hypothetical protein | |
| 2034 | SEQF9979.1_CP028107.1 | SEQF9979.1_02120 | open | 1002 [NA] | 333 [AA] | 2194557-2195558 | lpxD_2 | UDP-3-O-acylglucosamine N-acyltransferase |
| 2035 | SEQF9979.1_CP028107.1 | SEQF9979.1_02121 | open | 480 [NA] | 159 [AA] | 2195580-2196059 | hypothetical protein | |
| 2036 | SEQF9979.1_CP028107.1 | SEQF9979.1_02122 | open | 2124 [NA] | 707 [AA] | 2196100-2198223 | bamA | Outer membrane protein assembly factor BamA |
| 2037 | SEQF9979.1_CP028107.1 | SEQF9979.1_02123 | open | 4020 [NA] | 1339 [AA] | 2198294-2202313 | hypothetical protein | |
| 2038 | SEQF9979.1_CP028107.1 | SEQF9979.1_02124 | open | 705 [NA] | 234 [AA] | 2202329-2203033 | rsmG | Ribosomal RNA small subunit methyltransferase G |
| 2039 | SEQF9979.1_CP028107.1 | SEQF9979.1_02125 | open | 1893 [NA] | 630 [AA] | 2203035-2204927 | mnmG_2 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| 2040 | SEQF9979.1_CP028107.1 | SEQF9979.1_02126 | open | 660 [NA] | 219 [AA] | 2204945-2205604 | ktrA | Ktr system potassium uptake protein A |
| 2041 | SEQF9979.1_CP028107.1 | SEQF9979.1_02127 | open | 1335 [NA] | 444 [AA] | 2205618-2206952 | ktrB | Ktr system potassium uptake protein B |
| 2042 | SEQF9979.1_CP028107.1 | SEQF9979.1_02128 | open | 1227 [NA] | 408 [AA] | 2206967-2208193 | pepT | Peptidase T |
| 2043 | SEQF9979.1_CP028107.1 | SEQF9979.1_02129 | open | 1380 [NA] | 459 [AA] | 2208190-2209569 | mepA_5 | Multidrug export protein MepA |
| 2044 | SEQF9979.1_CP028107.1 | SEQF9979.1_02130 | open | 1617 [NA] | 538 [AA] | 2209584-2211200 | clcA | H(+)Cl(-) exchange transporter ClcA |
| 2045 | SEQF9979.1_CP028107.1 | SEQF9979.1_02131 | open | 804 [NA] | 267 [AA] | 2211157-2211960 | dapF | Diaminopimelate epimerase |
| 2046 | SEQF9979.1_CP028107.1 | SEQF9979.1_02132 | open | 246 [NA] | 81 [AA] | 2212115-2212360 | hypothetical protein | |
| 2047 | SEQF9979.1_CP028107.1 | SEQF9979.1_02133 | open | 777 [NA] | 258 [AA] | 2212724-2213500 | fpuD | Petrobactin import ATP-binding protein FpuD |
| 2048 | SEQF9979.1_CP028107.1 | SEQF9979.1_02134 | open | 1035 [NA] | 344 [AA] | 2213500-2214534 | feuC | Iron-uptake system permease protein FeuC |
| 2049 | SEQF9979.1_CP028107.1 | SEQF9979.1_02135 | open | 1482 [NA] | 493 [AA] | 2214588-2216069 | hypothetical protein | |
| 2050 | SEQF9979.1_CP028107.1 | SEQF9979.1_02136 | open | 762 [NA] | 253 [AA] | 2216241-2217002 | hypothetical protein | |
| 2051 | SEQF9979.1_CP028107.1 | SEQF9979.1_02137 | open | 1506 [NA] | 501 [AA] | 2216999-2218504 | nhaC | Na(+)H(+) antiporter NhaC |
| 2052 | SEQF9979.1_CP028107.1 | SEQF9979.1_02138 | open | 3582 [NA] | 1193 [AA] | 2218916-2222497 | Pyruvate:ferredoxin oxidoreductase | |
| 2053 | SEQF9979.1_CP028107.1 | SEQF9979.1_02139 | open | 1203 [NA] | 400 [AA] | 2222619-2223821 | ackA | Acetate kinase |
| 2054 | SEQF9979.1_CP028107.1 | SEQF9979.1_02140 | open | 1014 [NA] | 337 [AA] | 2223846-2224859 | pta | Phosphate acetyltransferase |
| 2055 | SEQF9979.1_CP028107.1 | SEQF9979.1_02141 | open | 1044 [NA] | 347 [AA] | 2224954-2225997 | ftsY | Signal recognition particle receptor FtsY |
| 2056 | SEQF9979.1_CP028107.1 | SEQF9979.1_02142 | open | 1425 [NA] | 474 [AA] | 2225981-2227405 | Ferredoxin--NADP reductase | |
| 2057 | SEQF9979.1_CP028107.1 | SEQF9979.1_02143 | open | 393 [NA] | 130 [AA] | 2227420-2227812 | hypothetical protein | |
| 2058 | SEQF9979.1_CP028107.1 | SEQF9979.1_02144 | open | 1089 [NA] | 362 [AA] | 2227809-2228897 | yqeH | putative protein YqeH |
| 2059 | SEQF9979.1_CP028107.1 | SEQF9979.1_02145 | open | 789 [NA] | 262 [AA] | 2228912-2229700 | xerC_5 | Tyrosine recombinase XerC |
| 2060 | SEQF9979.1_CP028107.1 | SEQF9979.1_02146 | open | 1308 [NA] | 435 [AA] | 2229719-2231026 | trmFO | Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO |
| 2061 | SEQF9979.1_CP028107.1 | SEQF9979.1_02147 | open | 2250 [NA] | 749 [AA] | 2231048-2233297 | topA | DNA topoisomerase 1 |
| 2062 | SEQF9979.1_CP028107.1 | SEQF9979.1_02148 | open | 852 [NA] | 283 [AA] | 2233312-2234163 | hypothetical protein | |
| 2063 | SEQF9979.1_CP028107.1 | SEQF9979.1_02149 | open | 675 [NA] | 224 [AA] | 2234181-2234855 | hypothetical protein | |
| 2064 | SEQF9979.1_CP028107.1 | SEQF9979.1_02150 | open | 1215 [NA] | 404 [AA] | 2234836-2236050 | xseA | Exodeoxyribonuclease 7 large subunit |
| 2065 | SEQF9979.1_CP028107.1 | SEQF9979.1_02151 | open | 1983 [NA] | 660 [AA] | 2236059-2238041 | uvrB | UvrABC system protein B |
| 2066 | SEQF9979.1_CP028107.1 | SEQF9979.1_02152 | open | 498 [NA] | 165 [AA] | 2238242-2238739 | nifF | Flavodoxin 2 |
| 2067 | SEQF9979.1_CP028107.1 | SEQF9979.1_02153 | open | 345 [NA] | 114 [AA] | 2238759-2239103 | hypothetical protein | |
| 2068 | SEQF9979.1_CP028107.1 | SEQF9979.1_02154 | open | 669 [NA] | 222 [AA] | 2239160-2239828 | yfiC_2 | tRNA1(Val) (adenine(37)-N6)-methyltransferase |
| 2069 | SEQF9979.1_CP028107.1 | SEQF9979.1_02155 | open | 918 [NA] | 305 [AA] | 2239825-2240742 | hypothetical protein | |
| 2070 | SEQF9979.1_CP028107.1 | SEQF9979.1_02156 | open | 684 [NA] | 227 [AA] | 2240743-2241426 | hypothetical protein | |
| 2071 | SEQF9979.1_CP028107.1 | SEQF9979.1_02157 | open | 1059 [NA] | 352 [AA] | 2241444-2242502 | cobT | Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
| 2072 | SEQF9979.1_CP028107.1 | SEQF9979.1_02158 | open | 582 [NA] | 193 [AA] | 2242513-2243094 | pspA | Phosphoserine phosphatase 1 |
| 2073 | SEQF9979.1_CP028107.1 | SEQF9979.1_02159 | open | 819 [NA] | 272 [AA] | 2243110-2243928 | cobS | Adenosylcobinamide-GDP ribazoletransferase |
| 2074 | SEQF9979.1_CP028107.1 | SEQF9979.1_02160 | open | 567 [NA] | 188 [AA] | 2243948-2244514 | cobU | Bifunctional adenosylcobalamin biosynthesis protein CobU |
| 2075 | SEQF9979.1_CP028107.1 | SEQF9979.1_02161 | open | 255 [NA] | 84 [AA] | 2244792-2245046 | hypothetical protein | |
| 2076 | SEQF9979.1_CP028107.1 | SEQF9979.1_02162 | open | 1287 [NA] | 428 [AA] | 2245164-2246450 | fhaC_2 | Filamentous hemagglutinin transporter protein FhaC |
| 2077 | SEQF9979.1_CP028107.1 | SEQF9979.1_02163 | open | 4218 [NA] | 1405 [AA] | 2246519-2250736 | hypothetical protein | |
| 2078 | SEQF9979.1_CP028107.1 | SEQF9979.1_02164 | open | 792 [NA] | 263 [AA] | 2250845-2251636 | bepA_2 | Beta-barrel assembly-enhancing protease |
| 2079 | SEQF9979.1_CP028107.1 | SEQF9979.1_02165 | open | 444 [NA] | 147 [AA] | 2251965-2252408 | hypothetical protein | |
| 2080 | SEQF9979.1_CP028107.1 | SEQF9979.1_02166 | open | 669 [NA] | 222 [AA] | 2252395-2253063 | queE | 7-carboxy-7-deazaguanine synthase |
| 2081 | SEQF9979.1_CP028107.1 | SEQF9979.1_02167 | open | 576 [NA] | 191 [AA] | 2253064-2253639 | folE_2 | GTP cyclohydrolase 1 |
| 2082 | SEQF9979.1_CP028107.1 | SEQF9979.1_02168 | open | 696 [NA] | 231 [AA] | 2253648-2254343 | queC | 7-cyano-7-deazaguanine synthase |
| 2083 | SEQF9979.1_CP028107.1 | SEQF9979.1_02169 | open | 483 [NA] | 160 [AA] | 2254344-2254826 | queF | NADPH-dependent 7-cyano-7-deazaguanine reductase |
| 2084 | SEQF9979.1_CP028107.1 | SEQF9979.1_02170 | open | 969 [NA] | 322 [AA] | 2254890-2255858 | kdsD | Arabinose 5-phosphate isomerase KdsD |
| 2085 | SEQF9979.1_CP028107.1 | SEQF9979.1_02171 | open | 1359 [NA] | 452 [AA] | 2255896-2257254 | gntT | High-affinity gluconate transporter |
| 2086 | SEQF9979.1_CP028107.1 | SEQF9979.1_02172 | open | 999 [NA] | 332 [AA] | 2257286-2258284 | pdxA2 | D-erythronate 4-phosphate dehydrogenase |
| 2087 | SEQF9979.1_CP028107.1 | SEQF9979.1_02173 | open | 1278 [NA] | 425 [AA] | 2258295-2259572 | denK | D-erythronate kinase |
| 2088 | SEQF9979.1_CP028107.1 | SEQF9979.1_02174 | open | 768 [NA] | 255 [AA] | 2259602-2260369 | glpR | Glycerol-3-phosphate regulon repressor |
| 2089 | SEQF9979.1_CP028107.1 | SEQF9979.1_02175 | open | 948 [NA] | 315 [AA] | 2260526-2261473 | hypothetical protein | |
| 2090 | SEQF9979.1_CP028107.1 | SEQF9979.1_02176 | open | 363 [NA] | 120 [AA] | 2261569-2261931 | hypothetical protein | |
| 2091 | SEQF9979.1_CP028107.1 | SEQF9979.1_02177 | open | 1200 [NA] | 399 [AA] | 2262013-2263212 | pgk | Phosphoglycerate kinase |
| 2092 | SEQF9979.1_CP028107.1 | SEQF9979.1_02178 | open | 1005 [NA] | 334 [AA] | 2263274-2264278 | gap | Glyceraldehyde-3-phosphate dehydrogenase |
| 2093 | SEQF9979.1_CP028107.1 | SEQF9979.1_02179 | open | 870 [NA] | 289 [AA] | 2264418-2265287 | rluD_2 | Ribosomal large subunit pseudouridine synthase D |
| 2094 | SEQF9979.1_CP028107.1 | SEQF9979.1_02180 | open | 1011 [NA] | 336 [AA] | 2265443-2266453 | hemA | Glutamyl-tRNA reductase |
| 2095 | SEQF9979.1_CP028107.1 | SEQF9979.1_02181 | open | 906 [NA] | 301 [AA] | 2266447-2267352 | hemC | Porphobilinogen deaminase |
| 2096 | SEQF9979.1_CP028107.1 | SEQF9979.1_02182 | open | 780 [NA] | 259 [AA] | 2267423-2268202 | yitU | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU |
| 2097 | SEQF9979.1_CP028107.1 | SEQF9979.1_02183 | open | 597 [NA] | 198 [AA] | 2268251-2268847 | hypothetical protein | |
| 2098 | SEQF9979.1_CP028107.1 | SEQF9979.1_02184 | open | 420 [NA] | 139 [AA] | 2268844-2269263 | hypothetical protein | |
| 2099 | SEQF9979.1_CP028107.1 | SEQF9979.1_02185 | open | 1464 [NA] | 487 [AA] | 2269291-2270754 | cysG | Siroheme synthase |
| 2100 | SEQF9979.1_CP028107.1 | SEQF9979.1_02186 | open | 645 [NA] | 214 [AA] | 2270771-2271415 | cmoA | Carboxy-S-adenosyl-L-methionine synthase |
| 2101 | SEQF9979.1_CP028107.1 | SEQF9979.1_02187 | open | 96 [NA] | 31 [AA] | 2271447-2271542 | hypothetical protein | |
| 2102 | SEQF9979.1_CP028107.1 | SEQF9979.1_02188 | open | 978 [NA] | 325 [AA] | 2271559-2272536 | hemB | Delta-aminolevulinic acid dehydratase |
| 2103 | SEQF9979.1_CP028107.1 | SEQF9979.1_02189 | open | 1311 [NA] | 436 [AA] | 2272533-2273843 | hemL | Glutamate-1-semialdehyde 2%2C1-aminomutase |
| 2104 | SEQF9979.1_CP028107.1 | SEQF9979.1_02190 | open | 834 [NA] | 277 [AA] | 2273836-2274669 | rutC | Putative aminoacrylate peracid reductase RutC |
| 2105 | SEQF9979.1_CP028107.1 | SEQF9979.1_02191 | open | 471 [NA] | 156 [AA] | 2274714-2275184 | ybaK | Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK |
| 2106 | SEQF9979.1_CP028107.1 | SEQF9979.1_02192 | open | 366 [NA] | 121 [AA] | 2275275-2275640 | hypothetical protein | |
| 2107 | SEQF9979.1_CP028107.1 | SEQF9979.1_02193 | open | 1140 [NA] | 379 [AA] | 2275644-2276783 | tgt | Queuine tRNA-ribosyltransferase |
| 2108 | SEQF9979.1_CP028107.1 | SEQF9979.1_02194 | open | 2178 [NA] | 725 [AA] | 2276795-2278972 | relA | GTP pyrophosphokinase |
| 2109 | SEQF9979.1_CP028107.1 | SEQF9979.1_02195 | open | 513 [NA] | 170 [AA] | 2278991-2279503 | apt | Adenine phosphoribosyltransferase |
| 2110 | SEQF9979.1_CP028107.1 | SEQF9979.1_02196 | open | 324 [NA] | 107 [AA] | 2279518-2279841 | hypothetical protein | |
| 2111 | SEQF9979.1_CP028107.1 | SEQF9979.1_02197 | open | 1284 [NA] | 427 [AA] | 2279838-2281121 | hypothetical protein | |
| 2112 | SEQF9979.1_CP028107.1 | SEQF9979.1_02198 | open | 444 [NA] | 147 [AA] | 2281145-2281588 | hypothetical protein | |
| 2113 | SEQF9979.1_CP028107.1 | SEQF9979.1_02199 | open | 480 [NA] | 159 [AA] | 2281601-2282080 | hypothetical protein | |
| 2114 | SEQF9979.1_CP028107.1 | SEQF9979.1_02200 | open | 879 [NA] | 292 [AA] | 2282055-2282933 | folD_2 | Bifunctional protein FolD protein |
| 2115 | SEQF9979.1_CP028107.1 | SEQF9979.1_02201 | open | 933 [NA] | 310 [AA] | 2282930-2283862 | fmt | Methionyl-tRNA formyltransferase |
| 2116 | SEQF9979.1_CP028107.1 | SEQF9979.1_02202 | open | 459 [NA] | 152 [AA] | 2283864-2284322 | nrdR | Transcriptional repressor NrdR |
| 2117 | SEQF9979.1_CP028107.1 | SEQF9979.1_02203 | open | 480 [NA] | 159 [AA] | 2284319-2284798 | fruA_2 | PTS system fructose-specific EIIABC component |
| 2118 | SEQF9979.1_CP028107.1 | SEQF9979.1_02204 | open | 660 [NA] | 219 [AA] | 2284798-2285457 | recO | DNA repair protein RecO |
| 2119 | SEQF9979.1_CP028107.1 | SEQF9979.1_02205 | open | 489 [NA] | 162 [AA] | 2285454-2285942 | hypothetical protein |