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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis JCP8070 (SEQF8019.1)
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PROKKA Annotation for SEQF8019.1
Genome selected: Gardnerella vaginalis JCP8070
Contigs:138 Bases:1479254 bps
CDS:1137 rRNA:2
tmRNA:1 tRNA:44
Annotation Table [page:3]
Number of Records Found: 1137 [3 Pages]
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# Molecule PID Genome
Viewer		 NA (Length)(Seq)
 AA (Length)(Seq)
 Range Gene Gene Product
1001 SEQF8019.1_KE347455.1 SEQF8019.1_01055 open 702 [NA] 233 [AA] 45124-45825 rsmC Ribosomal RNA small subunit methyltransferase C
1002 SEQF8019.1_KE347455.1 SEQF8019.1_01056 open 1518 [NA] 505 [AA] 45946-47463 hflX GTPase HflX
1003 SEQF8019.1_KE347455.1 SEQF8019.1_01057 open 963 [NA] 320 [AA] 47595-48557 ldh2 L-lactate dehydrogenase 2
1004 SEQF8019.1_KE347457.1 SEQF8019.1_01058 open 801 [NA] 266 [AA] 17-817 thrB_2 Homoserine kinase
1005 SEQF8019.1_KE347457.1 SEQF8019.1_01059 open 366 [NA] 121 [AA] 857-1222 hypothetical protein
1006 SEQF8019.1_KE347458.1 SEQF8019.1_01060 open 927 [NA] 308 [AA] 386-1312 hypothetical protein
1007 SEQF8019.1_KE347459.1 SEQF8019.1_01061 open 933 [NA] 310 [AA] 530-1462 yiaX1 putative protein YiaX1
1008 SEQF8019.1_KE347460.1 SEQF8019.1_01062 open 315 [NA] 104 [AA] 353-667 hypothetical protein
1009 SEQF8019.1_KE347460.1 SEQF8019.1_01063 open 1419 [NA] 472 [AA] 801-2219 hypothetical protein
1010 SEQF8019.1_KE347460.1 SEQF8019.1_01064 open 288 [NA] 95 [AA] 2448-2735 hypothetical protein
1011 SEQF8019.1_KE347460.1 SEQF8019.1_01065 open 942 [NA] 313 [AA] 2783-3724 hypothetical protein
1012 SEQF8019.1_KE347460.1 SEQF8019.1_01066 open 507 [NA] 168 [AA] 3890-4396 hypothetical protein
1013 SEQF8019.1_KE347460.1 SEQF8019.1_01067 open 594 [NA] 197 [AA] 5941-6534 hypothetical protein
1014 SEQF8019.1_KE347461.1 SEQF8019.1_01068 open 594 [NA] 197 [AA] 143-736 hypothetical protein
1015 SEQF8019.1_KE347463.1 SEQF8019.1_01069 open 489 [NA] 162 [AA] 45-533 smpB SsrA-binding protein
1016 SEQF8019.1_KE347463.1 SEQF8019.1_01070 open 1401 [NA] 466 [AA] 587-1987 hypothetical protein
1017 SEQF8019.1_KE347463.1 SEQF8019.1_01071 open 924 [NA] 307 [AA] 2109-3032 ftsX Cell division protein FtsX
1018 SEQF8019.1_KE347463.1 SEQF8019.1_01072 open 1329 [NA] 442 [AA] 3032-4360 btuD_8 Vitamin B12 import ATP-binding protein BtuD
1019 SEQF8019.1_KE347463.1 SEQF8019.1_01073 open 1122 [NA] 373 [AA] 4472-5593 prfB Peptide chain release factor 2
1020 SEQF8019.1_KE347463.1 SEQF8019.1_01074 open 774 [NA] 257 [AA] 5687-6460 map Methionine aminopeptidase 1
1021 SEQF8019.1_KE347463.1 SEQF8019.1_01075 open 2142 [NA] 713 [AA] 6552-8693 pepO Neutral endopeptidase
1022 SEQF8019.1_KE347463.1 SEQF8019.1_01076 open 1212 [NA] 403 [AA] 8847-10058 hypothetical protein
1023 SEQF8019.1_KE347463.1 SEQF8019.1_01077 open 600 [NA] 199 [AA] 10449-11048 Single-stranded DNA-binding protein
1024 SEQF8019.1_KE347463.1 SEQF8019.1_01078 open 1830 [NA] 609 [AA] 11268-13097 proS Proline--tRNA ligase
1025 SEQF8019.1_KE347464.1 SEQF8019.1_01079 open 609 [NA] 202 [AA] 527-1135 recR Recombination protein RecR
1026 SEQF8019.1_KE347464.1 SEQF8019.1_01080 open 2304 [NA] 767 [AA] 1136-3439 hypothetical protein
1027 SEQF8019.1_KE347464.1 SEQF8019.1_01081 open 405 [NA] 134 [AA] 3571-3975 hypothetical protein
1028 SEQF8019.1_KE347464.1 SEQF8019.1_01082 open 453 [NA] 150 [AA] 3972-4424 hypothetical protein
1029 SEQF8019.1_KE347464.1 SEQF8019.1_01083 open 276 [NA] 91 [AA] 4598-4873 hypothetical protein
1030 SEQF8019.1_KE347464.1 SEQF8019.1_01084 open 618 [NA] 205 [AA] 4998-5615 hypothetical protein
1031 SEQF8019.1_KE347464.1 SEQF8019.1_01085 open 639 [NA] 212 [AA] 5695-6333 hypothetical protein
1032 SEQF8019.1_KE347464.1 SEQF8019.1_01086 open 1035 [NA] 344 [AA] 6427-7461 Putative conjugal transfer protein
1033 SEQF8019.1_KE347464.1 SEQF8019.1_01087 open 1116 [NA] 371 [AA] 7442-8557 hypothetical protein
1034 SEQF8019.1_KE347464.1 SEQF8019.1_01088 open 1359 [NA] 452 [AA] 8699-10057 clcA H(+)Cl(-) exchange transporter ClcA
1035 SEQF8019.1_KE347464.1 SEQF8019.1_01089 open 420 [NA] 139 [AA] 10189-10608 crcB_1 Putative fluoride ion transporter CrcB
1036 SEQF8019.1_KE347464.1 SEQF8019.1_01090 open 558 [NA] 185 [AA] 10605-11162 crcB_2 Putative fluoride ion transporter CrcB
1037 SEQF8019.1_KE347464.1 SEQF8019.1_01091 open 1302 [NA] 433 [AA] 11208-12509 purA Adenylosuccinate synthetase
1038 SEQF8019.1_KE347464.1 SEQF8019.1_01092 open 1056 [NA] 351 [AA] 12639-13694 fba Fructose-bisphosphate aldolase
1039 SEQF8019.1_KE347464.1 SEQF8019.1_01093 open 387 [NA] 128 [AA] 13771-14157 hypothetical protein
1040 SEQF8019.1_KE347464.1 SEQF8019.1_01094 open 498 [NA] 165 [AA] 14165-14662 hypothetical protein
1041 SEQF8019.1_KE347464.1 SEQF8019.1_01095 open 1914 [NA] 637 [AA] 14955-16868 rho Transcription termination factor Rho
1042 SEQF8019.1_KE347464.1 SEQF8019.1_01096 open 1620 [NA] 539 [AA] 17075-18694 hypothetical protein
1043 SEQF8019.1_KE347464.1 SEQF8019.1_01097 open 315 [NA] 104 [AA] 18798-19112 putative protein
1044 SEQF8019.1_KE347464.1 SEQF8019.1_01098 open 972 [NA] 323 [AA] 19109-20080 hypothetical protein
1045 SEQF8019.1_KE347464.1 SEQF8019.1_01099 open 783 [NA] 260 [AA] 20259-21041 gatB Aspartylglutamyl-tRNA(AsnGln) amidotransferase subunit B
1046 SEQF8019.1_KE347465.1 SEQF8019.1_01100 open 399 [NA] 132 [AA] 138-536 grpE Protein GrpE
1047 SEQF8019.1_KE347466.1 SEQF8019.1_01101 open 609 [NA] 202 [AA] 99-707 tuf Elongation factor Tu
1048 SEQF8019.1_KE347467.1 SEQF8019.1_01103 open 552 [NA] 183 [AA] 66-617 csd putative cysteine desulfurase
1049 SEQF8019.1_KE347467.1 SEQF8019.1_01104 open 624 [NA] 207 [AA] 646-1269 sufU Zinc-dependent sulfurtransferase SufU
1050 SEQF8019.1_KE347467.1 SEQF8019.1_01105 open 468 [NA] 155 [AA] 1323-1790 hypothetical protein
1051 SEQF8019.1_KE347467.1 SEQF8019.1_01106 open 663 [NA] 220 [AA] 1804-2466 hypothetical protein
1052 SEQF8019.1_KE347467.1 SEQF8019.1_01107 open 645 [NA] 214 [AA] 2492-3136 hypothetical protein
1053 SEQF8019.1_KE347467.1 SEQF8019.1_01108 open 2043 [NA] 680 [AA] 3136-5178 hypothetical protein
1054 SEQF8019.1_KE347467.1 SEQF8019.1_01109 open 2325 [NA] 774 [AA] 5450-7774 hypothetical protein
1055 SEQF8019.1_KE347467.1 SEQF8019.1_01111 open 1677 [NA] 558 [AA] 8329-10005 lysS1 Lysine--tRNA ligase 1
1056 SEQF8019.1_KE347467.1 SEQF8019.1_01112 open 741 [NA] 246 [AA] 10161-10901 gpmA_2 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase
1057 SEQF8019.1_KE347467.1 SEQF8019.1_01113 open 681 [NA] 226 [AA] 11046-11726 phoU1 Phosphate-specific transport system accessory protein PhoU
1058 SEQF8019.1_KE347467.1 SEQF8019.1_01114 open 1431 [NA] 476 [AA] 11893-13323 sasA_4 Adaptive-response sensory-kinase SasA
1059 SEQF8019.1_KE347467.1 SEQF8019.1_01115 open 267 [NA] 88 [AA] 13370-13636 hypothetical protein
1060 SEQF8019.1_KE347467.1 SEQF8019.1_01116 open 1005 [NA] 334 [AA] 13782-14786 hypothetical protein
1061 SEQF8019.1_KE347467.1 SEQF8019.1_01117 open 753 [NA] 250 [AA] 14890-15642 hypothetical protein
1062 SEQF8019.1_KE347467.1 SEQF8019.1_01118 open 1044 [NA] 347 [AA] 15841-16884 Universal stress proteinMSMEI_3859
1063 SEQF8019.1_KE347467.1 SEQF8019.1_01119 open 1239 [NA] 412 [AA] 16992-18230 mgs Alpha-monoglucosyldiacylglycerol synthase
1064 SEQF8019.1_KE347467.1 SEQF8019.1_01120 open 420 [NA] 139 [AA] 18382-18801 putative protein
1065 SEQF8019.1_KE347467.1 SEQF8019.1_01121 open 873 [NA] 290 [AA] 18918-19790 thyA Thymidylate synthase
1066 SEQF8019.1_KE347467.1 SEQF8019.1_01122 open 639 [NA] 212 [AA] 19855-20493 folA Dihydrofolate reductase
1067 SEQF8019.1_KE347467.1 SEQF8019.1_01123 open 546 [NA] 181 [AA] 20512-21057 ptpA putative low molecular weight protein-tyrosine-phosphatase
1068 SEQF8019.1_KE347467.1 SEQF8019.1_01124 open 786 [NA] 261 [AA] 21171-21956 putative protein
1069 SEQF8019.1_KE347467.1 SEQF8019.1_01125 open 657 [NA] 218 [AA] 22129-22785 putative protein
1070 SEQF8019.1_KE347467.1 SEQF8019.1_01126 open 1368 [NA] 455 [AA] 22923-24290 dapE Succinyl-diaminopimelate desuccinylase
1071 SEQF8019.1_KE347467.1 SEQF8019.1_01128 open 2646 [NA] 881 [AA] 24715-27360 btuD_9 Vitamin B12 import ATP-binding protein BtuD
1072 SEQF8019.1_KE347467.1 SEQF8019.1_01130 open 90 [NA] 29 [AA] 27797-27886 hypothetical protein
1073 SEQF8019.1_KE347468.1 SEQF8019.1_01131 open 573 [NA] 190 [AA] 43-615 hypothetical protein
1074 SEQF8019.1_KE347468.1 SEQF8019.1_01132 open 504 [NA] 167 [AA] 612-1115 hypothetical protein
1075 SEQF8019.1_KE347469.1 SEQF8019.1_01133 open 705 [NA] 234 [AA] 35-739 hypothetical protein
1076 SEQF8019.1_KE347469.1 SEQF8019.1_01134 open 2448 [NA] 815 [AA] 861-3308 nrdD Anaerobic ribonucleoside-triphosphate reductase
1077 SEQF8019.1_KE347469.1 SEQF8019.1_01135 open 423 [NA] 140 [AA] 3546-3968 putative protein
1078 SEQF8019.1_KE347470.1 SEQF8019.1_01136 open 594 [NA] 197 [AA] 182-775 hypothetical protein
1079 SEQF8019.1_KE347471.1 SEQF8019.1_01137 open 1653 [NA] 550 [AA] 51-1703 hypothetical protein
1080 SEQF8019.1_KE347471.1 SEQF8019.1_01138 open 1653 [NA] 550 [AA] 1844-3496 hypothetical protein
1081 SEQF8019.1_KE347471.1 SEQF8019.1_01139 open 864 [NA] 287 [AA] 3517-4380 btuD_10 Vitamin B12 import ATP-binding protein BtuD
1082 SEQF8019.1_KE347471.1 SEQF8019.1_01140 open 1227 [NA] 408 [AA] 4622-5848 hypothetical protein
1083 SEQF8019.1_KE347471.1 SEQF8019.1_01141 open 1653 [NA] 550 [AA] 5845-7497 hypothetical protein
1084 SEQF8019.1_KE347471.1 SEQF8019.1_01142 open 1437 [NA] 478 [AA] 7621-9057 glnA1 Glutamine synthetase
1085 SEQF8019.1_KE347471.1 SEQF8019.1_01143 open 654 [NA] 217 [AA] 9158-9811 def_2 Peptide deformylase
1086 SEQF8019.1_KE347471.1 SEQF8019.1_01144 open 1413 [NA] 470 [AA] 10318-11730 glmM Phosphoglucosamine mutase
1087 SEQF8019.1_KE347471.1 SEQF8019.1_01145 open 384 [NA] 127 [AA] 11972-12355 rplT 50S ribosomal protein L20
1088 SEQF8019.1_KE347471.1 SEQF8019.1_01146 open 195 [NA] 64 [AA] 12410-12604 rpmI 50S ribosomal protein L35
1089 SEQF8019.1_KE347471.1 SEQF8019.1_01147 open 768 [NA] 255 [AA] 12585-13352 infC Translation initiation factor IF-3
1090 SEQF8019.1_KE347471.1 SEQF8019.1_01148 open 744 [NA] 247 [AA] 13602-14345 hypothetical protein
1091 SEQF8019.1_KE347471.1 SEQF8019.1_01149 open 1056 [NA] 351 [AA] 14544-15599 gap Glyceraldehyde-3-phosphate dehydrogenase
1092 SEQF8019.1_KE347471.1 SEQF8019.1_01150 open 501 [NA] 166 [AA] 15695-16195 ybaK Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK
1093 SEQF8019.1_KE347471.1 SEQF8019.1_01151 open 771 [NA] 256 [AA] 16494-17264 hypothetical protein
1094 SEQF8019.1_KE347471.1 SEQF8019.1_01152 open 1773 [NA] 590 [AA] 17393-19165 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase
1095 SEQF8019.1_KE347471.1 SEQF8019.1_01153 open 1455 [NA] 484 [AA] 19248-20702 folC Dihydrofolate synthasefolylpolyglutamate synthase
1096 SEQF8019.1_KE347471.1 SEQF8019.1_01154 open 717 [NA] 238 [AA] 21054-21770 hypothetical protein
1097 SEQF8019.1_KE347471.1 SEQF8019.1_01156 open 300 [NA] 99 [AA] 22080-22379 hypothetical protein
1098 SEQF8019.1_KE347471.1 SEQF8019.1_01157 open 258 [NA] 85 [AA] 22392-22649 hypothetical protein
1099 SEQF8019.1_KE347471.1 SEQF8019.1_01158 open 897 [NA] 298 [AA] 22743-23639 pfkB ATP-dependent 6-phosphofructokinase
1100 SEQF8019.1_KE347471.1 SEQF8019.1_01159 open 972 [NA] 323 [AA] 23938-24909 pepPI Xaa-Pro aminopeptidase 1
1101 SEQF8019.1_KE347472.1 SEQF8019.1_01160 open 450 [NA] 149 [AA] 185-634 hypothetical protein
1102 SEQF8019.1_KE347472.1 SEQF8019.1_01161 open 1092 [NA] 363 [AA] 1067-2158 btuD_11 Vitamin B12 import ATP-binding protein BtuD
1103 SEQF8019.1_KE347472.1 SEQF8019.1_01162 open 780 [NA] 259 [AA] 2169-2948 hypothetical protein
1104 SEQF8019.1_KE347472.1 SEQF8019.1_01163 open 951 [NA] 316 [AA] 2945-3895 hypothetical protein
1105 SEQF8019.1_KE347472.1 SEQF8019.1_01164 open 507 [NA] 168 [AA] 4302-4808 hypothetical protein
1106 SEQF8019.1_KE347472.1 SEQF8019.1_01165 open 960 [NA] 319 [AA] 4819-5778 hypothetical protein
1107 SEQF8019.1_KE347472.1 SEQF8019.1_01166 open 708 [NA] 235 [AA] 5963-6670 hypothetical protein
1108 SEQF8019.1_KE347472.1 SEQF8019.1_01167 open 300 [NA] 99 [AA] 6767-7066 hypothetical protein
1109 SEQF8019.1_KE347472.1 SEQF8019.1_01168 open 1302 [NA] 433 [AA] 7702-9003 hypothetical protein
1110 SEQF8019.1_KE347472.1 SEQF8019.1_01169 open 645 [NA] 214 [AA] 9351-9995 hypothetical protein
1111 SEQF8019.1_KE347472.1 SEQF8019.1_01170 open 402 [NA] 133 [AA] 10019-10420 hypothetical protein
1112 SEQF8019.1_KE347472.1 SEQF8019.1_01171 open 204 [NA] 67 [AA] 10417-10620 hypothetical protein
1113 SEQF8019.1_KE347472.1 SEQF8019.1_01172 open 153 [NA] 50 [AA] 10683-10835 hypothetical protein
1114 SEQF8019.1_KE347473.1 SEQF8019.1_01173 open 1077 [NA] 358 [AA] 86-1162 hypothetical protein
1115 SEQF8019.1_KE347473.1 SEQF8019.1_01174 open 777 [NA] 258 [AA] 2533-3309 hypothetical protein
1116 SEQF8019.1_KE347473.1 SEQF8019.1_01175 open 678 [NA] 225 [AA] 3374-4051 trmL tRNA (cytidine(34)-2-O)-methyltransferase
1117 SEQF8019.1_KE347473.1 SEQF8019.1_01176 open 948 [NA] 315 [AA] 4054-5001 yicL putative inner membrane transporter YicL
1118 SEQF8019.1_KE347474.1 SEQF8019.1_01177 open 576 [NA] 191 [AA] 37-612 pncB1 Nicotinate phosphoribosyltransferase pncB1
1119 SEQF8019.1_KE347474.1 SEQF8019.1_01178 open 408 [NA] 135 [AA] 660-1067 hypothetical protein
1120 SEQF8019.1_KE347474.1 SEQF8019.1_01179 open 555 [NA] 184 [AA] 1344-1898 coaD Phosphopantetheine adenylyltransferase
1121 SEQF8019.1_KE347474.1 SEQF8019.1_01180 open 987 [NA] 328 [AA] 2055-3041 hypothetical protein
1122 SEQF8019.1_KE347474.1 SEQF8019.1_01181 open 651 [NA] 216 [AA] 3043-3693 putative protein
1123 SEQF8019.1_KE347475.1 SEQF8019.1_01182 open 261 [NA] 86 [AA] 6-266 hypothetical protein
1124 SEQF8019.1_KE347475.1 SEQF8019.1_01183 open 1164 [NA] 387 [AA] 309-1472 xerC Tyrosine recombinase XerC
1125 SEQF8019.1_KE347475.1 SEQF8019.1_01184 open 261 [NA] 86 [AA] 1482-1742 relK Toxin RelK
1126 SEQF8019.1_KE347475.1 SEQF8019.1_01185 open 264 [NA] 87 [AA] 1735-1998 hypothetical protein
1127 SEQF8019.1_KE347475.1 SEQF8019.1_01186 open 1545 [NA] 514 [AA] 2174-3718 hypothetical protein
1128 SEQF8019.1_KE347475.1 SEQF8019.1_01187 open 1323 [NA] 440 [AA] 3715-5037 hypothetical protein
1129 SEQF8019.1_KE347475.1 SEQF8019.1_01188 open 777 [NA] 258 [AA] 5048-5824 sufC Vegetative protein 296
1130 SEQF8019.1_KE347476.1 SEQF8019.1_01189 open 294 [NA] 97 [AA] 154-447 hypothetical protein
1131 SEQF8019.1_KE347476.1 SEQF8019.1_01190 open 582 [NA] 193 [AA] 566-1147 ask Aspartokinase
1132 SEQF8019.1_KE347476.1 SEQF8019.1_01191 open 1068 [NA] 355 [AA] 1235-2302 asd Aspartate-semialdehyde dehydrogenase
1133 SEQF8019.1_KE347476.1 SEQF8019.1_01192 open 621 [NA] 206 [AA] 2354-2974 hypothetical protein
1134 SEQF8019.1_KE347476.1 SEQF8019.1_01193 open 702 [NA] 233 [AA] 3017-3718 putative ABC transporter ATP-binding protein
1135 SEQF8019.1_KE347476.1 SEQF8019.1_01194 open 2727 [NA] 908 [AA] 3752-6478 hypothetical protein
1136 SEQF8019.1_KE347476.1 SEQF8019.1_01195 open 1473 [NA] 490 [AA] 6544-8016 serP2 DL-alanine permease SerP2
1137 SEQF8019.1_KE347476.1 SEQF8019.1_01196 open 786 [NA] 261 [AA] 8059-8844 nucS Endonuclease NucS