Genome Explorer: Capnocytophaga ochracea NCTC11546 (SEQF9477.1)
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NCBI Annotation for SEQF9477.1
| Genome selected: Capnocytophaga ochracea NCTC11546 | |||
| Contigs: | 44 | Bases: | 2946791 bps |
| CDS: | 2609 | rRNA: | 16 |
| tmRNA: | 1 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2501 | UARG01000029.1 | SQA94396.1 | open | 162 [NA] | 53 [AA] | 5205-5366 | NCTC11546_02566 | 50S ribosomal protein L21 |
| 2502 | UARG01000029.1 | SQA94397.1 | open | 429 [NA] | 142 [AA] | 5402-5830 | NCTC11546_02567 | 50S ribosomal protein L21 |
| 2503 | UARG01000029.1 | SQA94398.1 | open | 261 [NA] | 86 [AA] | 5858-6118 | NCTC11546_02568 | 50S ribosomal protein L27 |
| 2504 | UARG01000029.1 | SQA94399.1 | open | 372 [NA] | 123 [AA] | 6970-7341 | NCTC11546_02569 | Uncharacterised protein |
| 2505 | UARG01000030.1 | SQA94400.1 | open | 297 [NA] | 98 [AA] | 9-305 | NCTC11546_02570 | Competence protein ComM |
| 2506 | UARG01000030.1 | SQA94401.1 | open | 492 [NA] | 163 [AA] | 358-849 | NCTC11546_02571 | Peptidyl-dipeptidase dcp |
| 2507 | UARG01000030.1 | SQA94402.1 | open | 1602 [NA] | 533 [AA] | 800-2401 | NCTC11546_02572 | Peptidyl-dipeptidase dcp |
| 2508 | UARG01000030.1 | SQA94403.1 | open | 333 [NA] | 110 [AA] | 2489-2821 | NCTC11546_02573 | Inner membrane lipoprotein YiaD precursor |
| 2509 | UARG01000030.1 | SQA94404.1 | open | 321 [NA] | 106 [AA] | 2934-3254 | NCTC11546_02574 | Inner membrane lipoprotein YiaD precursor |
| 2510 | UARG01000030.1 | SQA94405.1 | open | 711 [NA] | 236 [AA] | 3426-4136 | NCTC11546_02575 | Peptidyl-dipeptidase dcp |
| 2511 | UARG01000031.1 | SQA94406.1 | open | 303 [NA] | 100 [AA] | 1634-1936 | NCTC11546_02576 | Uncharacterised protein |
| 2512 | UARG01000031.1 | SQA94407.1 | open | 570 [NA] | 189 [AA] | 2049-2618 | NCTC11546_02577 | 5'-nucleotidase surE |
| 2513 | UARG01000031.1 | SQA94408.1 | open | 114 [NA] | 37 [AA] | 3031-3144 | NCTC11546_02578 | Uncharacterised protein |
| 2514 | UARG01000031.1 | SQA94409.1 | open | 819 [NA] | 272 [AA] | 3180-3998 | NCTC11546_02579 | 5'-nucleotidase surE |
| 2515 | UARG01000031.1 | SQA94410.1 | open | 303 [NA] | 100 [AA] | 3986-4288 | NCTC11546_02580 | Uncharacterised protein |
| 2516 | UARG01000031.1 | SQA94411.1 | open | 618 [NA] | 205 [AA] | 4300-4917 | NCTC11546_02581 | Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
| 2517 | UARG01000031.1 | SQA94412.1 | open | 420 [NA] | 139 [AA] | 4904-5323 | NCTC11546_02582 | Uncharacterised protein |
| 2518 | UARG01000032.1 | SQA94413.1 | open | 189 [NA] | 62 [AA] | 325-513 | NCTC11546_02583 | Uncharacterised protein |
| 2519 | UARG01000032.1 | SQA94414.1 | open | 360 [NA] | 119 [AA] | 1581-1940 | NCTC11546_02584 | Uncharacterised protein |
| 2520 | UARG01000032.1 | SQA94415.1 | open | 387 [NA] | 128 [AA] | 2101-2487 | NCTC11546_02585 | TonB-linked outer membrane protein, SusC/RagA family |
| 2521 | UARG01000032.1 | SQA94416.1 | open | 126 [NA] | 41 [AA] | 2439-2564 | NCTC11546_02586 | Uncharacterised protein |
| 2522 | UARG01000032.1 | SQA94417.1 | open | 252 [NA] | 83 [AA] | 2837-3088 | NCTC11546_02587 | TonB-linked outer membrane protein, SusC/RagA family |
| 2523 | UARG01000032.1 | SQA94418.1 | open | 285 [NA] | 94 [AA] | 3587-3871 | NCTC11546_02588 | Uncharacterised protein |
| 2524 | UARG01000032.1 | SQA94419.1 | open | 420 [NA] | 139 [AA] | 3901-4320 | NCTC11546_02589 | TonB-linked outer membrane protein, SusC/RagA family |
| 2525 | UARG01000032.1 | SQA94420.1 | open | 144 [NA] | 47 [AA] | 4330-4473 | NCTC11546_02590 | Uncharacterised protein |
| 2526 | UARG01000032.1 | SQA94421.1 | open | 207 [NA] | 68 [AA] | 4464-4670 | NCTC11546_02591 | Uncharacterised protein |
| 2527 | UARG01000032.1 | SQA94422.1 | open | 426 [NA] | 141 [AA] | 5263-5688 | NCTC11546_02592 | SusD family |
| 2528 | UARG01000032.1 | SQA94423.1 | open | 258 [NA] | 85 [AA] | 5902-6159 | NCTC11546_02593 | Uncharacterised protein |
| 2529 | UARG01000033.1 | SQA94424.1 | open | 1293 [NA] | 430 [AA] | 560-1852 | NCTC11546_02594 | Uncharacterized ABC transporter ATP-binding protein HI_1252 |
| 2530 | UARG01000033.1 | SQA94425.1 | open | 453 [NA] | 150 [AA] | 1798-2250 | NCTC11546_02595 | Uncharacterized ABC transporter ATP-binding protein YjjK |
| 2531 | UARG01000033.1 | SQA94426.1 | open | 480 [NA] | 159 [AA] | 2629-3108 | NCTC11546_02596 | Uncharacterized ABC transporter ATP-binding protein YjjK |
| 2532 | UARG01000033.1 | SQA94427.1 | open | 942 [NA] | 313 [AA] | 3117-4058 | NCTC11546_02597 | Uncharacterized ABC transporter ATP-binding protein HI_1252 |
| 2533 | UARG01000033.1 | SQA94428.1 | open | 96 [NA] | 31 [AA] | 4090-4185 | NCTC11546_02598 | Uncharacterised protein |
| 2534 | UARG01000034.1 | SQA94429.1 | open | 486 [NA] | 161 [AA] | 196-681 | NCTC11546_02599 | Uncharacterised protein |
| 2535 | UARG01000034.1 | SQA94430.1 | open | 639 [NA] | 212 [AA] | 762-1400 | NCTC11546_02600 | Uncharacterised protein |
| 2536 | UARG01000034.1 | SQA94431.1 | open | 714 [NA] | 237 [AA] | 1534-2247 | NCTC11546_02601 | Uncharacterised protein |
| 2537 | UARG01000034.1 | SQA94432.1 | open | 1005 [NA] | 334 [AA] | 2215-3219 | NCTC11546_02602 | Uncharacterised protein |
| 2538 | UARG01000034.1 | SQA94433.1 | open | 966 [NA] | 321 [AA] | 3439-4404 | NCTC11546_02603 | Fibronectin type III domain |
| 2539 | UARG01000034.1 | SQA94434.1 | open | 159 [NA] | 52 [AA] | 4755-4913 | NCTC11546_02604 | Uncharacterised protein |
| 2540 | UARG01000035.1 | SQA94435.1 | open | 1266 [NA] | 421 [AA] | 193-1458 | NCTC11546_02605 | Pyruvate dehydrogenase [ubiquinone] |
| 2541 | UARG01000035.1 | SQA94436.1 | open | 675 [NA] | 224 [AA] | 1640-2314 | NCTC11546_02606 | Uncharacterised protein |
| 2542 | UARG01000035.1 | SQA94437.1 | open | 501 [NA] | 166 [AA] | 2506-3006 | NCTC11546_02607 | Cadmium, cobalt and zinc/H(+)-K(+) antiporter |
| 2543 | UARG01000035.1 | SQA94438.1 | open | 477 [NA] | 158 [AA] | 3039-3515 | NCTC11546_02608 | Cadmium, cobalt and zinc/H(+)-K(+) antiporter |
| 2544 | UARG01000035.1 | SQA94439.1 | open | 675 [NA] | 224 [AA] | 3707-4381 | NCTC11546_02609 | Uncharacterised protein |
| 2545 | UARG01000035.1 | SQA94440.1 | open | 300 [NA] | 99 [AA] | 4519-4818 | NCTC11546_02610 | Pyruvate dehydrogenase [ubiquinone] |
| 2546 | UARG01000035.1 | SQA94441.1 | open | 240 [NA] | 79 [AA] | 4818-5057 | NCTC11546_02611 | Pyruvate dehydrogenase [ubiquinone] |
| 2547 | UARG01000035.1 | SQA94442.1 | open | 357 [NA] | 118 [AA] | 5012-5368 | NCTC11546_02612 | Pyruvate dehydrogenase [ubiquinone] |
| 2548 | UARG01000035.1 | SQA94443.1 | open | 399 [NA] | 132 [AA] | 5429-5827 | NCTC11546_02613 | Pyruvate dehydrogenase [ubiquinone] |
| 2549 | UARG01000036.1 | SQA94444.1 | open | 543 [NA] | 180 [AA] | 242-784 | NCTC11546_02614 | Uncharacterised protein |
| 2550 | UARG01000036.1 | SQA94445.1 | open | 177 [NA] | 58 [AA] | 914-1090 | NCTC11546_02615 | Uncharacterised protein |
| 2551 | UARG01000036.1 | SQA94446.1 | open | 204 [NA] | 67 [AA] | 1105-1308 | NCTC11546_02616 | Uncharacterised protein |
| 2552 | UARG01000036.1 | SQA94447.1 | open | 90 [NA] | 29 [AA] | 1581-1670 | NCTC11546_02617 | Uncharacterised protein |
| 2553 | UARG01000036.1 | SQA94448.1 | open | 576 [NA] | 191 [AA] | 1984-2559 | NCTC11546_02618 | Uncharacterised protein |
| 2554 | UARG01000036.1 | SQA94449.1 | open | 264 [NA] | 87 [AA] | 2693-2956 | NCTC11546_02619 | Uncharacterised protein |
| 2555 | UARG01000036.1 | SQA94450.1 | open | 120 [NA] | 39 [AA] | 3125-3244 | NCTC11546_02620 | Uncharacterised protein |
| 2556 | UARG01000036.1 | SQA94451.1 | open | 792 [NA] | 263 [AA] | 3377-4168 | NCTC11546_02621 | Uncharacterised protein |
| 2557 | UARG01000036.1 | SQA94452.1 | open | 90 [NA] | 29 [AA] | 4264-4353 | NCTC11546_02622 | Uncharacterised protein |
| 2558 | UARG01000036.1 | SQA94453.1 | open | 177 [NA] | 58 [AA] | 4847-5023 | NCTC11546_02623 | Uncharacterised protein |
| 2559 | UARG01000036.1 | SQA94454.1 | open | 471 [NA] | 156 [AA] | 5226-5696 | NCTC11546_02624 | Uncharacterised protein |
| 2560 | UARG01000038.1 | SQA94455.1 | open | 186 [NA] | 61 [AA] | 297-482 | NCTC11546_02629 | Uncharacterised protein |
| 2561 | UARG01000038.1 | SQA94456.1 | open | 342 [NA] | 113 [AA] | 494-835 | NCTC11546_02630 | MutS2 protein |
| 2562 | UARG01000038.1 | SQA94457.1 | open | 255 [NA] | 84 [AA] | 1783-2037 | NCTC11546_02631 | Uncharacterised protein |
| 2563 | UARG01000038.1 | SQA94458.1 | open | 978 [NA] | 325 [AA] | 2429-3406 | NCTC11546_02632 | MutS2 protein |
| 2564 | UARG01000038.1 | SQA94459.1 | open | 342 [NA] | 113 [AA] | 3633-3974 | NCTC11546_02633 | MutS2 protein |
| 2565 | UARG01000038.1 | SQA94460.1 | open | 471 [NA] | 156 [AA] | 3986-4456 | NCTC11546_02634 | Uncharacterised protein |
| 2566 | UARG01000038.1 | SQA94461.1 | open | 105 [NA] | 34 [AA] | 5153-5257 | NCTC11546_02635 | Uncharacterised protein |
| 2567 | UARG01000038.1 | SQA94462.1 | open | 315 [NA] | 104 [AA] | 5598-5912 | NCTC11546_02636 | Uncharacterised protein |
| 2568 | UARG01000039.1 | SQA94463.1 | open | 516 [NA] | 171 [AA] | 214-729 | NCTC11546_02637 | Uncharacterised protein |
| 2569 | UARG01000039.1 | SQA94464.1 | open | 243 [NA] | 80 [AA] | 755-997 | NCTC11546_02638 | Uncharacterised protein |
| 2570 | UARG01000039.1 | SQA94465.1 | open | 1008 [NA] | 335 [AA] | 1476-2483 | NCTC11546_02639 | Transposase |
| 2571 | UARG01000039.1 | SQA94466.1 | open | 693 [NA] | 230 [AA] | 2696-3388 | NCTC11546_02640 | Transposase |
| 2572 | UARG01000039.1 | SQA94467.1 | open | 276 [NA] | 91 [AA] | 4042-4317 | NCTC11546_02641 | Uncharacterised protein |
| 2573 | UARG01000039.1 | SQA94468.1 | open | 504 [NA] | 167 [AA] | 4344-4847 | NCTC11546_02642 | Uncharacterised protein |
| 2574 | UARG01000040.1 | SQA94469.1 | open | 279 [NA] | 92 [AA] | 185-463 | NCTC11546_02643 | Protein of uncharacterised function (DUF2797) |
| 2575 | UARG01000040.1 | SQA94470.1 | open | 1506 [NA] | 501 [AA] | 1544-3049 | NCTC11546_02644 | Uncharacterised protein |
| 2576 | UARG01000040.1 | SQA94471.1 | open | 2142 [NA] | 713 [AA] | 3089-5230 | NCTC11546_02645 | Uncharacterised protein |
| 2577 | UARG01000040.1 | SQA94472.1 | open | 792 [NA] | 263 [AA] | 5694-6485 | NCTC11546_02646 | Protein of uncharacterised function (DUF2797) |
| 2578 | UARG01000041.1 | SQA94473.1 | open | 108 [NA] | 35 [AA] | 633-740 | NCTC11546_02647 | Uncharacterised protein |
| 2579 | UARG01000041.1 | SQA94474.1 | open | 357 [NA] | 118 [AA] | 755-1111 | NCTC11546_02648 | Uncharacterised protein |
| 2580 | UARG01000041.1 | SQA94475.1 | open | 261 [NA] | 86 [AA] | 1075-1335 | NCTC11546_02649 | Uncharacterised protein |
| 2581 | UARG01000041.1 | SQA94476.1 | open | 123 [NA] | 40 [AA] | 1604-1726 | NCTC11546_02650 | Uncharacterised protein |
| 2582 | UARG01000041.1 | SQA94477.1 | open | 1035 [NA] | 344 [AA] | 2141-3175 | NCTC11546_02651 | Sulfate permease CysP |
| 2583 | UARG01000041.1 | SQA94478.1 | open | 1035 [NA] | 344 [AA] | 3348-4382 | NCTC11546_02652 | Sulfate permease CysP |
| 2584 | UARG01000041.1 | SQA94479.1 | open | 1224 [NA] | 407 [AA] | 4669-5892 | NCTC11546_02653 | Uncharacterised protein |
| 2585 | UARG01000042.1 | SQA94480.1 | open | 708 [NA] | 235 [AA] | 4-711 | NCTC11546_02654 | Ferrous-iron efflux pump FieF |
| 2586 | UARG01000042.1 | SQA94481.1 | open | 297 [NA] | 98 [AA] | 1141-1437 | NCTC11546_02655 | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 2587 | UARG01000042.1 | SQA94482.1 | open | 234 [NA] | 77 [AA] | 1680-1913 | NCTC11546_02656 | Uncharacterised protein |
| 2588 | UARG01000042.1 | SQA94483.1 | open | 246 [NA] | 81 [AA] | 1913-2158 | NCTC11546_02657 | Uncharacterised protein |
| 2589 | UARG01000042.1 | SQA94484.1 | open | 552 [NA] | 183 [AA] | 2191-2742 | NCTC11546_02658 | RNA polymerase factor sigma-54 |
| 2590 | UARG01000042.1 | SQA94485.1 | open | 468 [NA] | 155 [AA] | 2990-3457 | NCTC11546_02659 | RNA polymerase factor sigma-54 |
| 2591 | UARG01000042.1 | SQA94486.1 | open | 165 [NA] | 54 [AA] | 3948-4112 | NCTC11546_02660 | Uncharacterised protein |
| 2592 | UARG01000042.1 | SQA94487.1 | open | 381 [NA] | 126 [AA] | 4126-4506 | NCTC11546_02661 | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 2593 | UARG01000042.1 | SQA94488.1 | open | 396 [NA] | 131 [AA] | 4934-5329 | NCTC11546_02662 | ferrous iron efflux protein F |
| 2594 | UARG01000043.1 | SQA94489.1 | open | 153 [NA] | 50 [AA] | 160-312 | NCTC11546_02663 | addiction module toxin component, YafQ family |
| 2595 | UARG01000043.1 | SQA94490.1 | open | 135 [NA] | 44 [AA] | 345-479 | NCTC11546_02664 | Uncharacterised protein |
| 2596 | UARG01000043.1 | SQA94491.1 | open | 159 [NA] | 52 [AA] | 555-713 | NCTC11546_02665 | Uncharacterised protein |
| 2597 | UARG01000043.1 | SQA94492.1 | open | 1086 [NA] | 361 [AA] | 752-1837 | NCTC11546_02666 | Beta-N-acetylhexosaminidase |
| 2598 | UARG01000043.1 | SQA94493.1 | open | 696 [NA] | 231 [AA] | 1818-2513 | NCTC11546_02667 | Beta-hexosaminidase |
| 2599 | UARG01000043.1 | SQA94494.1 | open | 363 [NA] | 120 [AA] | 2851-3213 | NCTC11546_02668 | Beta-hexosaminidase |
| 2600 | UARG01000043.1 | SQA94495.1 | open | 1482 [NA] | 493 [AA] | 3258-4739 | NCTC11546_02669 | Beta-hexosaminidase |
| 2601 | UARG01000043.1 | SQA94496.1 | open | 243 [NA] | 80 [AA] | 4778-5020 | NCTC11546_02670 | Uncharacterised protein |
| 2602 | UARG01000043.1 | SQA94497.1 | open | 96 [NA] | 31 [AA] | 5024-5119 | NCTC11546_02671 | Uncharacterised protein |
| 2603 | UARG01000043.1 | SQA94498.1 | open | 153 [NA] | 50 [AA] | 5179-5331 | NCTC11546_02672 | addiction module toxin component, YafQ family |
| 2604 | UARG01000044.1 | SQA94499.1 | open | 225 [NA] | 74 [AA] | 64-288 | NCTC11546_02673 | Uncharacterised protein |
| 2605 | UARG01000044.1 | SQA94500.1 | open | 579 [NA] | 192 [AA] | 285-863 | NCTC11546_02674 | Uncharacterised protein |
| 2606 | UARG01000044.1 | SQA94501.1 | open | 1461 [NA] | 486 [AA] | 1020-2480 | NCTC11546_02675 | Uncharacterised protein |
| 2607 | UARG01000044.1 | SQA94502.1 | open | 1461 [NA] | 486 [AA] | 2336-3796 | NCTC11546_02676 | Uncharacterised protein |
| 2608 | UARG01000044.1 | SQA94503.1 | open | 828 [NA] | 275 [AA] | 3928-4755 | NCTC11546_02677 | Uncharacterised protein |
| 2609 | UARG01000044.1 | SQA94504.1 | open | 129 [NA] | 42 [AA] | 4764-4892 | NCTC11546_02678 | Uncharacterised protein |