Genome Explorer: Veillonella parvula AM48-14BH (SEQF9441.1)
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NCBI Annotation for SEQF9441.1
| Genome selected: Veillonella parvula AM48-14BH | |||
| Contigs: | 111 | Bases: | 2087186 bps |
| CDS: | 275 | rRNA: | 16 |
| tmRNA: | 1 | tRNA: | 48 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | QSEQ01000072.1 | RGZ78239.1 | open | 939 [NA] | 312 [AA] | 3669-4607 | DW971_09075 | LysR family transcriptional regulator |
| 1502 | QSEQ01000072.1 | RGZ78240.1 | open | 528 [NA] | 175 [AA] | 4714-5241 | DW971_09080 | ribonuclease M5 |
| 1503 | QSEQ01000072.1 | RGZ78241.1 | open | 855 [NA] | 284 [AA] | 5255-6109 | DW971_09085 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA |
| 1504 | QSEQ01000072.1 | RGZ78242.1 | open | 1212 [NA] | 403 [AA] | 6200-7411 | DW971_09090 | sodium:glutamate symporter |
| 1505 | QSEQ01000073.1 | RGZ78173.1 | open | 1758 [NA] | 585 [AA] | 159-1916 | DW971_09095 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 1506 | QSEQ01000073.1 | RGZ78174.1 | open | 249 [NA] | 82 [AA] | 2269-2517 | DW971_09100 | DUF3343 domain-containing protein |
| 1507 | QSEQ01000073.1 | RGZ78175.1 | open | 1062 [NA] | 353 [AA] | 2535-3596 | DW971_09105 | YedE-related selenium metabolism membrane protein |
| 1508 | QSEQ01000073.1 | RGZ78176.1 | open | 1158 [NA] | 385 [AA] | 3717-4874 | DW971_09110 | aminotransferase class V-fold PLP-dependent enzyme |
| 1509 | QSEQ01000073.1 | RGZ78177.1 | open | 831 [NA] | 276 [AA] | 4917-5747 | DW971_09115 | nitrogenase cofactor biosynthesis protein NifB |
| 1510 | QSEQ01000073.1 | RGZ78178.1 | open | 807 [NA] | 268 [AA] | 5750-6556 | DW971_09120 | 4Fe-4S binding protein |
| 1511 | QSEQ01000073.1 | RGZ78179.1 | open | 864 [NA] | 287 [AA] | 6549-7412 | DW971_09125 | ABC transporter substrate-binding protein |
| 1512 | QSEQ01000074.1 | RGZ78162.1 | open | 954 [NA] | 317 [AA] | 140-1093 | DW971_09130 | enoyl-[acyl-carrier-protein] reductase FabK |
| 1513 | QSEQ01000074.1 | RGZ78163.1 | open | 549 [NA] | 182 [AA] | 1115-1663 | DW971_09135 | gamma carbonic anhydrase family protein |
| 1514 | QSEQ01000074.1 | RGZ78164.1 | open | 1239 [NA] | 412 [AA] | 1756-2994 | DW971_09140 | chloride channel protein |
| 1515 | QSEQ01000074.1 | RGZ78165.1 | open | 498 [NA] | 165 [AA] | 2997-3494 | DW971_09145 | anaerobic ribonucleoside-triphosphate reductase activating protein |
| 1516 | QSEQ01000074.1 | RGZ78166.1 | open | 2151 [NA] | 716 [AA] | 3750-5900 | DW971_09150 | anaerobic ribonucleoside-triphosphate reductase |
| 1517 | QSEQ01000074.1 | RGZ78167.1 | open | 804 [NA] | 267 [AA] | 6169-6972 | DW971_09155 | capsular biosynthesis protein |
| 1518 | QSEQ01000076.1 | RGZ78078.1 | open | 1164 [NA] | 387 [AA] | 120-1283 | DW971_09165 | LL-diaminopimelate aminotransferase |
| 1519 | QSEQ01000076.1 | RGZ78079.1 | open | 2223 [NA] | 740 [AA] | 1601-3823 | DW971_09170 | autotransporter outer membrane beta-barrel domain-containing protein |
| 1520 | QSEQ01000076.1 | RGZ78080.1 | open | 972 [NA] | 323 [AA] | 4115-5086 | DW971_09175 | diaminopimelate dehydrogenase |
| 1521 | QSEQ01000076.1 | RGZ78081.1 | open | 1173 [NA] | 390 [AA] | 5197-6369 | DW971_09180 | class I SAM-dependent methyltransferase |
| 1522 | QSEQ01000077.1 | RGZ78067.1 | open | 1350 [NA] | 449 [AA] | 136-1485 | DW971_09185 | M18 family aminopeptidase |
| 1523 | QSEQ01000077.1 | RGZ78068.1 | open | 1401 [NA] | 466 [AA] | 1720-3120 | DW971_09190 | anion permease |
| 1524 | QSEQ01000077.1 | RGZ78069.1 | open | 834 [NA] | 277 [AA] | 3357-4190 | DW971_09195 | ATP-binding protein |
| 1525 | QSEQ01000077.1 | RGZ78070.1 | open | 1194 [NA] | 397 [AA] | 4311-5504 | DW971_09200 | PLP-dependent aminotransferase family protein |
| 1526 | QSEQ01000077.1 | RGZ78071.1 | open | 738 [NA] | 245 [AA] | 5656-6393 | DW971_09205 | TVP38/TMEM64 family protein |
| 1527 | QSEQ01000078.1 | RGZ78005.1 | open | 1554 [NA] | 517 [AA] | 204-1757 | DW971_09210 | ABC transporter substrate-binding protein |
| 1528 | QSEQ01000078.1 | RGZ78006.1 | open | 930 [NA] | 309 [AA] | 1825-2754 | DW971_09215 | DUF3829 domain-containing protein |
| 1529 | QSEQ01000078.1 | RGZ78007.1 | open | 1293 [NA] | 430 [AA] | 4561-5853 | DW971_09225 | DNA (cytosine-5-)-methyltransferase |
| 1530 | QSEQ01000078.1 | RGZ78008.1 | open | 342 [NA] | 113 [AA] | 5913-6254 | DW971_09230 | hypothetical protein |
| 1531 | QSEQ01000079.1 | RGZ77998.1 | open | 459 [NA] | 152 [AA] | 159-617 | DW971_09235 | hypothetical protein |
| 1532 | QSEQ01000079.1 | RGZ77999.1 | open | 819 [NA] | 272 [AA] | 928-1746 | DW971_09240 | sulfurtransferase |
| 1533 | QSEQ01000079.1 | RGZ78000.1 | open | 228 [NA] | 75 [AA] | 1760-1987 | DW971_09245 | hypothetical protein |
| 1534 | QSEQ01000079.1 | RGZ78001.1 | open | 756 [NA] | 251 [AA] | 2125-2880 | DW971_09250 | exodeoxyribonuclease III |
| 1535 | QSEQ01000080.1 | RGZ77991.1 | open | 1332 [NA] | 443 [AA] | 193-1524 | DW971_09270 | putrescine-ornithine antiporter |
| 1536 | QSEQ01000080.1 | RGZ77992.1 | open | 1212 [NA] | 403 [AA] | 3540-4751 | DW971_09280 | argininosuccinate synthase |
| 1537 | QSEQ01000080.1 | RGZ77993.1 | open | 807 [NA] | 268 [AA] | 5004-5810 | DW971_09285 | transglycosylase |
| 1538 | QSEQ01000081.1 | RGZ77934.1 | open | 1299 [NA] | 432 [AA] | 164-1462 | DW971_09290 | DEAD/DEAH box helicase |
| 1539 | QSEQ01000081.1 | RGZ77935.1 | open | 1596 [NA] | 531 [AA] | 4083-5678 | DW971_09300 | peptide chain release factor 3 |
| 1540 | QSEQ01000082.1 | RGZ77927.1 | open | 816 [NA] | 271 [AA] | 210-1025 | DW971_09305 | ABC transporter ATP-binding protein |
| 1541 | QSEQ01000082.1 | RGZ77928.1 | open | 1569 [NA] | 522 [AA] | 1827-3395 | DW971_09315 | ABC transporter substrate-binding protein |
| 1542 | QSEQ01000082.1 | RGZ77929.1 | open | 822 [NA] | 273 [AA] | 3549-4370 | DW971_09320 | ABC transporter permease |
| 1543 | QSEQ01000082.1 | RGZ77930.1 | open | 939 [NA] | 312 [AA] | 4370-5308 | DW971_09325 | ABC transporter permease |
| 1544 | QSEQ01000083.1 | RGZ77849.1 | open | 204 [NA] | 67 [AA] | 153-356 | DW971_09330 | DUF951 domain-containing protein |
| 1545 | QSEQ01000083.1 | RGZ77850.1 | open | 1032 [NA] | 343 [AA] | 366-1397 | DW971_09335 | selenide, water dikinase SelD |
| 1546 | QSEQ01000083.1 | RGZ77851.1 | open | 603 [NA] | 200 [AA] | 1560-2162 | DW971_09340 | sulfurtransferase-like selenium metabolism protein YedF |
| 1547 | QSEQ01000083.1 | RGZ77852.1 | open | 258 [NA] | 85 [AA] | 2287-2544 | DW971_09345 | DUF3343 domain-containing protein |
| 1548 | QSEQ01000083.1 | RGZ77853.1 | open | 708 [NA] | 235 [AA] | 2663-3370 | DW971_09350 | NAD(P)H-dependent oxidoreductase |
| 1549 | QSEQ01000083.1 | RGZ77854.1 | open | 240 [NA] | 79 [AA] | 3528-3767 | DW971_09355 | GlsB/YeaQ/YmgE family stress response membrane protein |
| 1550 | QSEQ01000083.1 | RGZ77855.1 | open | 237 [NA] | 78 [AA] | 3846-4082 | DW971_09360 | CsbD family protein |
| 1551 | QSEQ01000083.1 | RGZ77856.1 | open | 1107 [NA] | 368 [AA] | 4160-5266 | DW971_09365 | redox-regulated ATPase YchF |
| 1552 | QSEQ01000084.1 | RGZ77837.1 | open | 231 [NA] | 76 [AA] | 313-543 | DW971_09370 | 30S ribosomal protein S18 |
| 1553 | QSEQ01000084.1 | RGZ77838.1 | open | 399 [NA] | 132 [AA] | 583-981 | DW971_09375 | single-stranded DNA-binding protein |
| 1554 | QSEQ01000084.1 | RGZ77839.1 | open | 285 [NA] | 94 [AA] | 1001-1285 | DW971_09380 | 30S ribosomal protein S6 |
| 1555 | QSEQ01000084.1 | RGZ77840.1 | open | 1185 [NA] | 394 [AA] | 1428-2612 | DW971_09385 | MFS transporter |
| 1556 | QSEQ01000085.1 | RGZ77830.1 | open | 747 [NA] | 248 [AA] | 228-974 | DW971_09400 | ATP-dependent sacrificial sulfur transferase LarE |
| 1557 | QSEQ01000085.1 | RGZ77831.1 | open | 756 [NA] | 251 [AA] | 971-1726 | DW971_09405 | nickel pincer cofactor biosynthesis protein LarB |
| 1558 | QSEQ01000085.1 | RGZ77832.1 | open | 1278 [NA] | 425 [AA] | 3090-4367 | DW971_09415 | nickel-dependent lactate racemase |
| 1559 | QSEQ01000086.1 | RGZ77774.1 | open | 1044 [NA] | 347 [AA] | 222-1265 | DW971_09420 | inverse autotransporter beta-barrel domain-containing protein |
| 1560 | QSEQ01000086.1 | RGZ77775.1 | open | 2409 [NA] | 802 [AA] | 1528-3936 | DW971_09425 | S-layer protein |
| 1561 | QSEQ01000088.1 | RGZ77728.1 | open | 1065 [NA] | 354 [AA] | 398-1462 | DW971_09440 | ATP-binding protein |
| 1562 | QSEQ01000088.1 | RGZ77729.1 | open | 867 [NA] | 288 [AA] | 1753-2619 | DW971_09445 | sigma-70 family RNA polymerase sigma factor |
| 1563 | QSEQ01000088.1 | RGZ77730.1 | open | 609 [NA] | 202 [AA] | 2939-3547 | DW971_09450 | hypothetical protein |
| 1564 | QSEQ01000089.1 | RGZ77716.1 | open | 741 [NA] | 246 [AA] | 51-791 | DW971_09455 | hypothetical protein |
| 1565 | QSEQ01000089.1 | RGZ77717.1 | open | 222 [NA] | 73 [AA] | 818-1039 | DW971_09460 | DUF1624 domain-containing protein |
| 1566 | QSEQ01000089.1 | RGZ77718.1 | open | 1101 [NA] | 366 [AA] | 1036-2136 | DW971_09465 | UDP-galactopyranose mutase |
| 1567 | QSEQ01000089.1 | RGZ77719.1 | open | 1437 [NA] | 478 [AA] | 2136-3572 | DW971_09470 | undecaprenyl-phosphate galactose phosphotransferase WbaP |
| 1568 | QSEQ01000090.1 | RGZ77641.1 | open | 804 [NA] | 267 [AA] | 86-889 | DW971_09475 | DUF3100 domain-containing protein |
| 1569 | QSEQ01000090.1 | RGZ77642.1 | open | 462 [NA] | 153 [AA] | 882-1343 | DW971_09480 | hypothetical protein |
| 1570 | QSEQ01000090.1 | RGZ77643.1 | open | 1320 [NA] | 439 [AA] | 1475-2794 | DW971_09485 | amidohydrolase |
| 1571 | QSEQ01000091.1 | RGZ77633.1 | open | 1743 [NA] | 580 [AA] | 145-1887 | DW971_09490 | ubiquinone-dependent pyruvate dehydrogenase |
| 1572 | QSEQ01000091.1 | RGZ77634.1 | open | 210 [NA] | 69 [AA] | 2497-2706 | DW971_09500 | hypothetical protein |
| 1573 | QSEQ01000091.1 | RGZ77635.1 | open | 270 [NA] | 89 [AA] | 2735->3006 | DW971_09505 | hypothetical protein |
| 1574 | QSEQ01000092.1 | RGZ77625.1 | open | 726 [NA] | 241 [AA] | 74-799 | DW971_09510 | amino acid ABC transporter ATP-binding protein |
| 1575 | QSEQ01000092.1 | RGZ77626.1 | open | 657 [NA] | 218 [AA] | 796-1452 | DW971_09515 | amino acid ABC transporter permease |
| 1576 | QSEQ01000092.1 | RGZ77627.1 | open | 807 [NA] | 268 [AA] | 1464-2270 | DW971_09520 | basic amino acid ABC transporter substrate-binding protein |
| 1577 | QSEQ01000093.1 | RGZ77574.1 | open | 372 [NA] | 123 [AA] | 767-1138 | DW971_09535 | CGGC domain-containing protein |
| 1578 | QSEQ01000093.1 | RGZ77575.1 | open | 1173 [NA] | 390 [AA] | 1323-2495 | DW971_09540 | peptidase M48 |
| 1579 | QSEQ01000094.1 | RGZ77566.1 | open | 420 [NA] | 139 [AA] | 422-841 | DW971_09545 | N-acetyltransferase |
| 1580 | QSEQ01000094.1 | RGZ77567.1 | open | 303 [NA] | 100 [AA] | 860-1162 | DW971_09550 | hypothetical protein |
| 1581 | QSEQ01000094.1 | RGZ77568.1 | open | 324 [NA] | 107 [AA] | 1165-1488 | DW971_09555 | hypothetical protein |
| 1582 | QSEQ01000094.1 | RGZ77569.1 | open | 417 [NA] | 138 [AA] | 1490-1906 | DW971_09560 | hypothetical protein |
| 1583 | QSEQ01000095.1 | RGZ77522.1 | open | 762 [NA] | 253 [AA] | 1635-2396 | DW971_09575 | DUF4422 domain-containing protein |
| 1584 | QSEQ01000096.1 | RGZ77521.1 | open | 642 [NA] | 214 [AA] | 1747->2388 | DW971_09585 | hypothetical protein |
| 1585 | QSEQ01000097.1 | RGZ77480.1 | open | 1008 [NA] | 335 [AA] | 146-1153 | DW971_09590 | branched-chain amino acid aminotransferase |
| 1586 | QSEQ01000097.1 | RGZ77481.1 | open | 393 [NA] | 130 [AA] | 1312-1704 | DW971_09595 | dihydrolipoamide acyltransferase |
| 1587 | QSEQ01000099.1 | RGZ77469.1 | open | 885 [NA] | 294 [AA] | 193-1077 | DW971_09605 | DUF600 family protein |
| 1588 | QSEQ01000099.1 | RGZ77470.1 | open | 625 [NA] | 208 [AA] | 1116->1740 | DW971_09610 | hypothetical protein |
| 1589 | QSEQ01000100.1 | RGZ77422.1 | open | 1212 [NA] | 403 [AA] | 309-1520 | DW971_09615 | hypothetical protein |
| 1590 | QSEQ01000102.1 | RGZ77375.1 | open | 1316 [NA] | 439 [AA] | <1-1316 | DW971_09640 | DNA adenine methylase |
| 1591 | QSEQ01000103.1 | RGZ77370.1 | open | 516 [NA] | 171 [AA] | 540-1055 | DW971_09650 | thiol peroxidase |
| 1592 | QSEQ01000104.1 | RGZ77340.1 | open | 1124 [NA] | 375 [AA] | <1-1124 | DW971_09655 | elongation factor Tu |
| 1593 | QSEQ01000105.1 | RGZ77335.1 | open | 1077 [NA] | 359 [AA] | 49->1125 | DW971_09660 | hypothetical protein |
| 1594 | QSEQ01000107.1 | RGZ77281.1 | open | 453 [NA] | 150 [AA] | 65-517 | DW971_09670 | hypothetical protein |
| 1595 | QSEQ01000107.1 | RGZ77282.1 | open | 306 [NA] | 101 [AA] | 561-866 | DW971_09675 | hypothetical protein |
| 1596 | QSEQ01000108.1 | RGZ77276.1 | open | 585 [NA] | 194 [AA] | 98-682 | DW971_09680 | phosphatase PAP2 family protein |
| 1597 | QSEQ01000109.1 | RGZ77219.1 | open | 798 [NA] | 265 [AA] | 46->844 | DW971_09685 | DUF805 domain-containing protein |
| 1598 | QSEQ01000111.1 | RGZ77185.1 | open | 615 [NA] | 205 [AA] | <1->616 | DW971_09705 | hypothetical protein |