Genome Explorer: Agrobacterium tumefaciens G 8.3 (SEQF8774.1)
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NCBI Annotation for SEQF8774.1
| Genome selected: Agrobacterium tumefaciens G 8.3 | |||
| Contigs: | 50 | Bases: | 6485591 bps |
| CDS: | 125 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 52 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 6001 | JAALZG010000034.1 | NTA84859.1 | open | 963 [NA] | 320 [AA] | 13214-14176 | G6L13_30895 | helix-turn-helix domain-containing protein |
| 6002 | JAALZG010000034.1 | NTA84860.1 | open | 1407 [NA] | 468 [AA] | 14189-15595 | G6L13_30900 | MATE family efflux transporter |
| 6003 | JAALZG010000034.1 | NTA84861.1 | open | 1185 [NA] | 394 [AA] | 15592-16776 | G6L13_30905 | thiolase family protein |
| 6004 | JAALZG010000034.1 | NTA84862.1 | open | 996 [NA] | 331 [AA] | 16796-17791 | G6L13_30910 | aldo/keto reductase |
| 6005 | JAALZG010000034.1 | NTA84863.1 | open | 540 [NA] | 179 [AA] | 17838-18377 | G6L13_30915 | SnoaL-like domain-containing protein |
| 6006 | JAALZG010000034.1 | NTA84864.1 | open | 429 [NA] | 142 [AA] | 18449-18877 | G6L13_30920 | winged helix-turn-helix transcriptional regulator |
| 6007 | JAALZG010000034.1 | NTA84865.1 | open | 1467 [NA] | 488 [AA] | 18946-20412 | G6L13_30925 | TolC family protein |
| 6008 | JAALZG010000035.1 | NTA84866.1 | open | 750 [NA] | 249 [AA] | 269-1018 | G6L13_30930 | hypothetical protein |
| 6009 | JAALZG010000035.1 | NTA84867.1 | open | 3609 [NA] | 1202 [AA] | 1031-4639 | G6L13_30935 | Ti-type conjugative transfer relaxase TraA |
| 6010 | JAALZG010000035.1 | NTA84868.1 | open | 777 [NA] | 258 [AA] | 4908-5684 | G6L13_30940 | NYN domain-containing protein |
| 6011 | JAALZG010000035.1 | NTA84869.1 | open | 306 [NA] | 101 [AA] | 5698-6003 | G6L13_30945 | mobilization protein |
| 6012 | JAALZG010000035.1 | NTA84870.1 | open | 2970 [NA] | 989 [AA] | 6680-9649 | G6L13_30955 | Tn3 family transposase |
| 6013 | JAALZG010000035.1 | NTA84871.1 | open | 606 [NA] | 201 [AA] | 9666-10271 | G6L13_30960 | recombinase family protein |
| 6014 | JAALZG010000035.1 | NTA84872.1 | open | 318 [NA] | 105 [AA] | 10875-11192 | G6L13_30965 | DNA-binding transcriptional regulator |
| 6015 | JAALZG010000035.1 | NTA84873.1 | open | 390 [NA] | 129 [AA] | 11170-11559 | G6L13_30970 | type II toxin-antitoxin system RelE/ParE family toxin |
| 6016 | JAALZG010000035.1 | NTA84874.1 | open | 282 [NA] | 93 [AA] | 11638-11919 | G6L13_30975 | ribbon-helix-helix protein, CopG family |
| 6017 | JAALZG010000035.1 | NTA84875.1 | open | 624 [NA] | 207 [AA] | 11992-12615 | G6L13_30980 | AAA family ATPase |
| 6018 | JAALZG010000035.1 | NTA84876.1 | open | 876 [NA] | 291 [AA] | 12859-13734 | G6L13_30985 | helix-turn-helix domain-containing protein |
| 6019 | JAALZG010000035.1 | NTA84877.1 | open | 210 [NA] | 69 [AA] | 13926-14135 | G6L13_30990 | ribbon-helix-helix protein, CopG family |
| 6020 | JAALZG010000035.1 | NTA84878.1 | open | 561 [NA] | 186 [AA] | 14245-14805 | G6L13_30995 | recombinase family protein |
| 6021 | JAALZG010000035.1 | NTA84879.1 | open | 870 [NA] | 289 [AA] | 15125-15994 | G6L13_31005 | NmrA family NAD(P)-binding protein |
| 6022 | JAALZG010000035.1 | NTA84880.1 | open | 348 [NA] | 115 [AA] | 16072-16419 | G6L13_31010 | helix-turn-helix transcriptional regulator |
| 6023 | JAALZG010000035.1 | NTA84881.1 | open | 969 [NA] | 322 [AA] | 16543-17511 | G6L13_31015 | helix-turn-helix domain-containing protein |
| 6024 | JAALZG010000035.1 | NTA84882.1 | open | 543 [NA] | 180 [AA] | 17613-18155 | G6L13_31020 | cysteine hydrolase |
| 6025 | JAALZG010000035.1 | NTA84883.1 | open | 873 [NA] | 290 [AA] | 18179-19051 | G6L13_31025 | MBL fold metallo-hydrolase |
| 6026 | JAALZG010000037.1 | NTA84884.1 | open | 1758 [NA] | 585 [AA] | <1-1759 | G6L13_31050 | SGNH/GDSL hydrolase family protein |
| 6027 | JAALZG010000037.1 | NTA84885.1 | open | 234 [NA] | 77 [AA] | 1762-1995 | G6L13_31055 | hypothetical protein |
| 6028 | JAALZG010000037.1 | NTA84886.1 | open | 1002 [NA] | 333 [AA] | 2185-3186 | G6L13_31060 | glycoside hydrolase family 19 protein |
| 6029 | JAALZG010000037.1 | NTA84887.1 | open | 246 [NA] | 81 [AA] | 3186-3431 | G6L13_31065 | hypothetical protein |
| 6030 | JAALZG010000037.1 | NTA84888.1 | open | 435 [NA] | 145 [AA] | 3579->4013 | G6L13_31070 | hypothetical protein |
| 6031 | JAALZG010000038.1 | NTA84889.1 | open | 342 [NA] | 113 [AA] | 92-433 | G6L13_31075 | IS66 family insertion sequence hypothetical protein |
| 6032 | JAALZG010000038.1 | NTA84890.1 | open | 348 [NA] | 115 [AA] | 430-777 | G6L13_31080 | IS66 family insertion sequence element accessory protein TnpB |
| 6033 | JAALZG010000038.1 | NTA84891.1 | open | 1659 [NA] | 552 [AA] | 856-2514 | G6L13_31085 | IS66 family transposase |
| 6034 | JAALZG010000038.1 | NTA84892.1 | open | 575 [NA] | 191 [AA] | 2514->3088 | G6L13_31090 | plasmid pRiA4b ORF-3 family protein |
| 6035 | JAALZG010000039.1 | NTA84893.1 | open | 956 [NA] | 318 [AA] | <1-956 | G6L13_31095 | ABC transporter ATP-binding protein |
| 6036 | JAALZG010000039.1 | NTA84894.1 | open | 825 [NA] | 274 [AA] | 969-1793 | G6L13_31100 | carbohydrate ABC transporter permease |
| 6037 | JAALZG010000039.1 | NTA84895.1 | open | 873 [NA] | 290 [AA] | 1806-2678 | G6L13_31105 | sugar ABC transporter permease |
| 6038 | JAALZG010000040.1 | NTA84896.1 | open | 759 [NA] | 252 [AA] | 132-890 | G6L13_31110 | ATP-binding protein |
| 6039 | JAALZG010000040.1 | NTA84897.1 | open | 1497 [NA] | 498 [AA] | 887-2383 | G6L13_31115 | IS21 family transposase |
| 6040 | JAALZG010000041.1 | NTA84898.1 | open | 978 [NA] | 325 [AA] | 11-988 | G6L13_31120 | AAA family ATPase |
| 6041 | JAALZG010000041.1 | NTA84899.1 | open | 1353 [NA] | 450 [AA] | 988->2342 | G6L13_31125 | transposase family protein |
| 6042 | JAALZG010000042.1 | NTA84900.1 | open | 234 [NA] | 77 [AA] | 7-240 | G6L13_31130 | hypothetical protein |
| 6043 | JAALZG010000042.1 | NTA84901.1 | open | 2028 [NA] | 675 [AA] | 243-2270 | G6L13_31135 | SGNH/GDSL hydrolase family protein |
| 6044 | JAALZG010000043.1 | NTA84902.1 | open | 258 [NA] | 85 [AA] | 566-823 | G6L13_31140 | DUF4258 domain-containing protein |
| 6045 | JAALZG010000043.1 | NTA84903.1 | open | 459 [NA] | 152 [AA] | 820-1278 | G6L13_31145 | helix-turn-helix domain-containing protein |
| 6046 | JAALZG010000043.1 | NTA84904.1 | open | 216 [NA] | 71 [AA] | 1342->1558 | G6L13_31150 | hypothetical protein |
| 6047 | JAALZG010000044.1 | NTA84905.1 | open | 1071 [NA] | 356 [AA] | 140-1210 | G6L13_31155 | IS110 family transposase |
| 6048 | JAALZG010000045.1 | NTA84906.1 | open | 896 [NA] | 298 [AA] | 344->1239 | G6L13_31160 | hypothetical protein |
| 6049 | JAALZG010000046.1 | NTA84907.1 | open | 408 [NA] | 135 [AA] | 135-542 | G6L13_31165 | hypothetical protein |
| 6050 | JAALZG010000046.1 | NTA84908.1 | open | 273 [NA] | 90 [AA] | 539-811 | G6L13_31170 | hypothetical protein |
| 6051 | JAALZG010000046.1 | NTA84909.1 | open | 269 [NA] | 89 [AA] | 808->1076 | G6L13_31175 | hypothetical protein |
| 6052 | JAALZG010000047.1 | NTA84910.1 | open | 603 [NA] | 201 [AA] | <1-603 | G6L13_31180 | phage major capsid protein |
| 6053 | JAALZG010000048.1 | NTA84911.1 | open | 609 [NA] | 202 [AA] | 10-618 | G6L13_31185 | HK97 family phage prohead protease |
| 6054 | JAALZG010000049.1 | NTA84912.1 | open | 609 [NA] | 202 [AA] | 10-618 | G6L13_31190 | HK97 family phage prohead protease |
| 6055 | JAALZG010000050.1 | NTA84913.1 | open | 558 [NA] | 186 [AA] | 72->629 | G6L13_31195 | MobA/MobL family protein |