Genome Explorer: Agrobacterium tumefaciens J2/75 (SEQF8764.1)
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NCBI Annotation for SEQF8764.1
| Genome selected: Agrobacterium tumefaciens J2/75 | |||
| Contigs: | 41 | Bases: | 5628932 bps |
| CDS: | 105 | rRNA: | 7 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | JAALYZ010000018.1 | NSY72563.1 | open | 402 [NA] | 133 [AA] | 197447-197848 | G6L43_25655 | DUF3085 domain-containing protein |
| 5002 | JAALYZ010000018.1 | NSY72564.1 | open | 5091 [NA] | 1696 [AA] | 197976-203066 | G6L43_25660 | lactate dehydrogenase |
| 5003 | JAALYZ010000018.1 | NSY72565.1 | open | 360 [NA] | 119 [AA] | 203162-203521 | G6L43_25665 | helix-turn-helix transcriptional regulator |
| 5004 | JAALYZ010000018.1 | NSY72566.1 | open | 984 [NA] | 327 [AA] | 203604-204587 | G6L43_25670 | NAD(P)-dependent alcohol dehydrogenase |
| 5005 | JAALYZ010000018.1 | NSY72567.1 | open | 1761 [NA] | 586 [AA] | 204968-206728 | G6L43_25675 | ParB N-terminal domain-containing protein |
| 5006 | JAALYZ010000018.1 | NSY72568.1 | open | 474 [NA] | 157 [AA] | 206825-207298 | G6L43_25680 | hypothetical protein |
| 5007 | JAALYZ010000018.1 | NSY72569.1 | open | 888 [NA] | 295 [AA] | 207295-208182 | G6L43_25685 | hypothetical protein |
| 5008 | JAALYZ010000018.1 | NSY72570.1 | open | 309 [NA] | 102 [AA] | 208179-208487 | G6L43_25690 | hypothetical protein |
| 5009 | JAALYZ010000018.1 | NSY72571.1 | open | 210 [NA] | 69 [AA] | 208484-208693 | G6L43_25695 | hypothetical protein |
| 5010 | JAALYZ010000018.1 | NSY72572.1 | open | 306 [NA] | 101 [AA] | 208713-209018 | G6L43_25700 | alkylphosphonate utilization protein |
| 5011 | JAALYZ010000018.1 | NSY72573.1 | open | 600 [NA] | 199 [AA] | 209536-210135 | G6L43_25705 | hypothetical protein |
| 5012 | JAALYZ010000018.1 | NSY72574.1 | open | 147 [NA] | 48 [AA] | 210233-210379 | G6L43_25710 | hypothetical protein |
| 5013 | JAALYZ010000018.1 | NSY72575.1 | open | 927 [NA] | 308 [AA] | 210449-211375 | G6L43_25715 | ArdC family protein |
| 5014 | JAALYZ010000018.1 | NSY72576.1 | open | 939 [NA] | 312 [AA] | 211375-212313 | G6L43_25720 | hypothetical protein |
| 5015 | JAALYZ010000018.1 | NSY72577.1 | open | 168 [NA] | 56 [AA] | 212985->213152 | G6L43_25725 | DUF736 family protein |
| 5016 | JAALYZ010000019.1 | NSY72578.1 | open | 228 [NA] | 75 [AA] | <1-229 | G6L43_25730 | DUF736 family protein |
| 5017 | JAALYZ010000019.1 | NSY72579.1 | open | 612 [NA] | 203 [AA] | 321-932 | G6L43_25735 | hypothetical protein |
| 5018 | JAALYZ010000019.1 | NSY72580.1 | open | 243 [NA] | 80 [AA] | 913-1155 | G6L43_25740 | hypothetical protein |
| 5019 | JAALYZ010000019.1 | NSY72581.1 | open | 1407 [NA] | 468 [AA] | 1236-2642 | G6L43_25745 | hypothetical protein |
| 5020 | JAALYZ010000019.1 | NSY72582.1 | open | 852 [NA] | 283 [AA] | 2705-3556 | G6L43_25750 | DUF4160 domain-containing protein |
| 5021 | JAALYZ010000019.1 | NSY72583.1 | open | 168 [NA] | 56 [AA] | 4640->4807 | G6L43_25760 | DUF736 family protein |
| 5022 | JAALYZ010000020.1 | NSY72584.1 | open | 246 [NA] | 81 [AA] | 1918-2163 | G6L43_25770 | type II toxin-antitoxin system prevent-host-death family antitoxin |
| 5023 | JAALYZ010000020.1 | NSY72585.1 | open | 1149 [NA] | 382 [AA] | 2309-3457 | G6L43_25775 | site-specific integrase |
| 5024 | JAALYZ010000020.1 | NSY72586.1 | open | 5184 [NA] | 1727 [AA] | 4289-9472 | G6L43_25785 | ATP-binding protein |
| 5025 | JAALYZ010000020.1 | NSY72587.1 | open | 621 [NA] | 206 [AA] | 9557-10177 | G6L43_25790 | hypothetical protein |
| 5026 | JAALYZ010000020.1 | NSY72588.1 | open | 615 [NA] | 204 [AA] | 10134-10748 | G6L43_25795 | hypothetical protein |
| 5027 | JAALYZ010000020.1 | NSY72589.1 | open | 330 [NA] | 109 [AA] | 11121-11450 | G6L43_25800 | hypothetical protein |
| 5028 | JAALYZ010000020.1 | NSY72590.1 | open | 3567 [NA] | 1188 [AA] | 11505-15071 | G6L43_25805 | ATP-binding protein |
| 5029 | JAALYZ010000020.1 | NSY72591.1 | open | 1713 [NA] | 570 [AA] | 15296-17008 | G6L43_25810 | AIPR family protein |
| 5030 | JAALYZ010000020.1 | NSY72592.1 | open | 930 [NA] | 309 [AA] | 17419-18348 | G6L43_25815 | LysR family transcriptional regulator |
| 5031 | JAALYZ010000021.1 | NSY72593.1 | open | 1047 [NA] | 348 [AA] | 99-1145 | G6L43_25825 | Fic family protein |
| 5032 | JAALYZ010000021.1 | NSY72594.1 | open | 474 [NA] | 157 [AA] | 1279-1752 | G6L43_25830 | DUF1857 family protein |
| 5033 | JAALYZ010000021.1 | NSY72595.1 | open | 870 [NA] | 289 [AA] | 1791-2660 | G6L43_25835 | NmrA/HSCARG family protein |
| 5034 | JAALYZ010000021.1 | NSY72596.1 | open | 891 [NA] | 296 [AA] | 2766-3656 | G6L43_25840 | LysR family transcriptional regulator |
| 5035 | JAALYZ010000021.1 | NSY72597.1 | open | 900 [NA] | 299 [AA] | 3669-4568 | G6L43_25845 | AraC family transcriptional regulator |
| 5036 | JAALYZ010000021.1 | NSY72598.1 | open | 759 [NA] | 252 [AA] | 4667-5425 | G6L43_25850 | SDR family oxidoreductase |
| 5037 | JAALYZ010000021.1 | NSY72599.1 | open | 945 [NA] | 314 [AA] | 5463-6407 | G6L43_25855 | dienelactone hydrolase |
| 5038 | JAALYZ010000021.1 | NSY72600.1 | open | 252 [NA] | 83 [AA] | 6915-7166 | G6L43_25860 | antitoxin |
| 5039 | JAALYZ010000021.1 | NSY72601.1 | open | 909 [NA] | 302 [AA] | 7584-8492 | G6L43_25870 | HEPN domain-containing protein |
| 5040 | JAALYZ010000021.1 | NSY72602.1 | open | 987 [NA] | 328 [AA] | 8743-9729 | G6L43_25875 | alpha/beta hydrolase |
| 5041 | JAALYZ010000021.1 | NSY72603.1 | open | 810 [NA] | 269 [AA] | 9775-10584 | G6L43_25880 | SDR family oxidoreductase |
| 5042 | JAALYZ010000021.1 | NSY72604.1 | open | 381 [NA] | 126 [AA] | 10631-11011 | G6L43_25885 | helix-turn-helix transcriptional regulator |
| 5043 | JAALYZ010000021.1 | NSY72605.1 | open | 534 [NA] | 177 [AA] | 11171-11704 | G6L43_25890 | TetR/AcrR family transcriptional regulator |
| 5044 | JAALYZ010000021.1 | NSY72606.1 | open | 1419 [NA] | 472 [AA] | 11785-13203 | G6L43_25895 | MFS transporter |
| 5045 | JAALYZ010000021.1 | NSY72607.1 | open | 756 [NA] | 251 [AA] | 13292-14047 | G6L43_25900 | SDR family oxidoreductase |
| 5046 | JAALYZ010000021.1 | NSY72608.1 | open | 690 [NA] | 229 [AA] | 14316-15005 | G6L43_25905 | aspartate/glutamate racemase family protein |
| 5047 | JAALYZ010000021.1 | NSY72609.1 | open | 912 [NA] | 303 [AA] | 15057-15968 | G6L43_25910 | AraC family transcriptional regulator |
| 5048 | JAALYZ010000021.1 | NSY72610.1 | open | 828 [NA] | 275 [AA] | 16062-16889 | G6L43_25915 | oxidoreductase |
| 5049 | JAALYZ010000021.1 | NSY72611.1 | open | 591 [NA] | 196 [AA] | 16945-17535 | G6L43_25920 | TetR/AcrR family transcriptional regulator |
| 5050 | JAALYZ010000021.1 | NSY72612.1 | open | 627 [NA] | 208 [AA] | 17603-18229 | G6L43_25925 | hypothetical protein |
| 5051 | JAALYZ010000021.1 | NSY72613.1 | open | 855 [NA] | 284 [AA] | 18338-19192 | G6L43_25930 | hypothetical protein |
| 5052 | JAALYZ010000021.1 | NSY72614.1 | open | 777 [NA] | 258 [AA] | 19189-19965 | G6L43_25935 | molybdopterin-dependent oxidoreductase |
| 5053 | JAALYZ010000021.1 | NSY72615.1 | open | 585 [NA] | 194 [AA] | 20382-20966 | G6L43_25945 | DUF308 domain-containing protein |
| 5054 | JAALYZ010000021.1 | NSY72616.1 | open | 297 [NA] | 98 [AA] | 21008-21304 | G6L43_25950 | chorismate mutase |
| 5055 | JAALYZ010000021.1 | NSY72617.1 | open | 864 [NA] | 287 [AA] | 21372-22235 | G6L43_25955 | LysR family transcriptional regulator |
| 5056 | JAALYZ010000021.1 | NSY72618.1 | open | 825 [NA] | 274 [AA] | 22344-23168 | G6L43_25960 | SDR family NAD(P)-dependent oxidoreductase |
| 5057 | JAALYZ010000021.1 | NSY72619.1 | open | 849 [NA] | 282 [AA] | 23215-24063 | G6L43_25965 | alpha/beta hydrolase |
| 5058 | JAALYZ010000021.1 | NSY72620.1 | open | 531 [NA] | 176 [AA] | 24129-24659 | G6L43_25970 | VOC family protein |
| 5059 | JAALYZ010000021.1 | NSY72621.1 | open | 729 [NA] | 242 [AA] | 24662-25390 | G6L43_25975 | L,D-transpeptidase |
| 5060 | JAALYZ010000021.1 | NSY72622.1 | open | 759 [NA] | 252 [AA] | 25497-26255 | G6L43_25980 | alpha/beta hydrolase |
| 5061 | JAALYZ010000021.1 | NSY72623.1 | open | 390 [NA] | 129 [AA] | 26494-26883 | G6L43_25985 | RidA family protein |
| 5062 | JAALYZ010000021.1 | NSY72624.1 | open | 294 [NA] | 97 [AA] | 27133-27426 | G6L43_25995 | type II toxin-antitoxin system RelE/ParE family toxin |
| 5063 | JAALYZ010000021.1 | NSY72625.1 | open | 831 [NA] | 276 [AA] | 27630-28460 | G6L43_26000 | aldo/keto reductase |
| 5064 | JAALYZ010000021.1 | NSY72626.1 | open | 882 [NA] | 293 [AA] | 28535-29416 | G6L43_26005 | NmrA family NAD(P)-binding protein |
| 5065 | JAALYZ010000021.1 | NSY72627.1 | open | 1284 [NA] | 427 [AA] | 29450-30733 | G6L43_26010 | beta-lactamase family protein |
| 5066 | JAALYZ010000021.1 | NSY72628.1 | open | 900 [NA] | 299 [AA] | 30924-31823 | G6L43_26015 | LysR family transcriptional regulator |
| 5067 | JAALYZ010000021.1 | NSY72629.1 | open | 432 [NA] | 143 [AA] | 32284-32715 | G6L43_26020 | helix-turn-helix transcriptional regulator |
| 5068 | JAALYZ010000021.1 | NSY72630.1 | open | 297 [NA] | 98 [AA] | 32843-33139 | G6L43_26025 | hypothetical protein |
| 5069 | JAALYZ010000021.1 | NSY72631.1 | open | 780 [NA] | 259 [AA] | 33209-33988 | G6L43_26030 | SDR family oxidoreductase |
| 5070 | JAALYZ010000021.1 | NSY72632.1 | open | 816 [NA] | 271 [AA] | 34068-34883 | G6L43_26035 | oxidoreductase |
| 5071 | JAALYZ010000021.1 | NSY72633.1 | open | 312 [NA] | 103 [AA] | 36163-36474 | G6L43_26045 | helix-turn-helix domain-containing protein |
| 5072 | JAALYZ010000021.1 | NSY72634.1 | open | 1254 [NA] | 417 [AA] | 36467-37720 | G6L43_26050 | type II toxin-antitoxin system HipA family toxin |
| 5073 | JAALYZ010000021.1 | NSY72635.1 | open | 1215 [NA] | 404 [AA] | 37832-39046 | G6L43_26055 | GGDEF domain-containing protein |
| 5074 | JAALYZ010000021.1 | NSY72636.1 | open | 408 [NA] | 135 [AA] | 39762-40169 | G6L43_26060 | helix-turn-helix transcriptional regulator |
| 5075 | JAALYZ010000021.1 | NSY72637.1 | open | 996 [NA] | 331 [AA] | 41935-42930 | G6L43_26070 | LacI family transcriptional regulator |
| 5076 | JAALYZ010000021.1 | NSY72638.1 | open | 954 [NA] | 317 [AA] | 43106-44059 | G6L43_26075 | sugar ABC transporter substrate-binding protein |
| 5077 | JAALYZ010000021.1 | NSY72639.1 | open | 1122 [NA] | 373 [AA] | 44186-45307 | G6L43_26080 | ABC transporter permease |
| 5078 | JAALYZ010000021.1 | NSY72640.1 | open | 789 [NA] | 262 [AA] | 45307-46095 | G6L43_26085 | sugar ABC transporter ATP-binding protein |
| 5079 | JAALYZ010000021.1 | NSY72641.1 | open | 795 [NA] | 264 [AA] | 46180-46974 | G6L43_26090 | TIM barrel protein |
| 5080 | JAALYZ010000021.1 | NSY72642.1 | open | 1020 [NA] | 339 [AA] | 46998-48017 | G6L43_26095 | Gfo/Idh/MocA family oxidoreductase |
| 5081 | JAALYZ010000022.1 | NSY72643.1 | open | 366 [NA] | 121 [AA] | 422-787 | G6L43_26105 | transcriptional regulator |
| 5082 | JAALYZ010000022.1 | NSY72644.1 | open | 1101 [NA] | 366 [AA] | 2433-3533 | G6L43_26115 | helix-turn-helix transcriptional regulator |
| 5083 | JAALYZ010000022.1 | NSY72645.1 | open | 468 [NA] | 155 [AA] | 3790-4257 | G6L43_26120 | Rrf2 family transcriptional regulator |
| 5084 | JAALYZ010000022.1 | NSY72646.1 | open | 408 [NA] | 135 [AA] | 6435-6842 | G6L43_26125 | hypothetical protein |
| 5085 | JAALYZ010000022.1 | NSY72647.1 | open | 1089 [NA] | 362 [AA] | 7335-8423 | G6L43_26130 | helix-turn-helix transcriptional regulator |
| 5086 | JAALYZ010000023.1 | NSY72648.1 | open | 387 [NA] | 128 [AA] | 2604-2990 | G6L43_26160 | translesion error-prone DNA polymerase V autoproteolytic subunit |
| 5087 | JAALYZ010000023.1 | NSY72649.1 | open | 231 [NA] | 76 [AA] | 4860-5090 | G6L43_26175 | hypothetical protein |
| 5088 | JAALYZ010000023.1 | NSY72650.1 | open | 1062 [NA] | 353 [AA] | 5432-6493 | G6L43_26180 | porin |
| 5089 | JAALYZ010000023.1 | NSY72651.1 | open | 114 [NA] | 38 [AA] | 7031->7144 | G6L43_26185 | IS6 family transposase |
| 5090 | JAALYZ010000024.1 | NSY72652.1 | open | 213 [NA] | 70 [AA] | 254-466 | G6L43_26190 | DUF2283 domain-containing protein |
| 5091 | JAALYZ010000024.1 | NSY72653.1 | open | 279 [NA] | 92 [AA] | 638-916 | G6L43_26195 | DUF3768 domain-containing protein |
| 5092 | JAALYZ010000024.1 | NSY72654.1 | open | 234 [NA] | 77 [AA] | 1078-1311 | G6L43_26200 | hypothetical protein |
| 5093 | JAALYZ010000024.1 | NSY72655.1 | open | 4761 [NA] | 1586 [AA] | 1308->6069 | G6L43_26205 | filamentous hemagglutinin |
| 5094 | JAALYZ010000025.1 | NSY72656.1 | open | 114 [NA] | 38 [AA] | <1-114 | G6L43_26210 | IS6 family transposase |
| 5095 | JAALYZ010000025.1 | NSY72657.1 | open | 1332 [NA] | 443 [AA] | 182-1513 | G6L43_26215 | MFS transporter |
| 5096 | JAALYZ010000025.1 | NSY72658.1 | open | 1788 [NA] | 595 [AA] | 1847-3634 | G6L43_26220 | sensor histidine kinase |
| 5097 | JAALYZ010000025.1 | NSY72659.1 | open | 1314 [NA] | 437 [AA] | 3631-4944 | G6L43_26225 | sigma-54-dependent Fis family transcriptional regulator |
| 5098 | JAALYZ010000025.1 | NSY72660.1 | open | 249 [NA] | 82 [AA] | 5211-5459 | G6L43_26230 | hypothetical protein |
| 5099 | JAALYZ010000025.1 | NSY72661.1 | open | 114 [NA] | 38 [AA] | 5477->5590 | G6L43_26235 | IS6 family transposase |
| 5100 | JAALYZ010000026.1 | NSY72662.1 | open | 624 [NA] | 207 [AA] | 494-1117 | G6L43_26240 | LysE family translocator |
| 5101 | JAALYZ010000026.1 | NSY72663.1 | open | 714 [NA] | 237 [AA] | 1502-2215 | G6L43_26250 | IS6 family transposase |
| 5102 | JAALYZ010000026.1 | NSY72664.1 | open | 1095 [NA] | 364 [AA] | 2548-3642 | G6L43_26255 | helix-turn-helix transcriptional regulator |
| 5103 | JAALYZ010000026.1 | NSY72665.1 | open | 306 [NA] | 101 [AA] | 3921-4226 | G6L43_26260 | hypothetical protein |
| 5104 | JAALYZ010000026.1 | NSY72666.1 | open | 321 [NA] | 106 [AA] | 4223-4543 | G6L43_26265 | hypothetical protein |
| 5105 | JAALYZ010000027.1 | NSY72667.1 | open | 1248 [NA] | 415 [AA] | <1-1248 | G6L43_26270 | ShlB/FhaC/HecB family hemolysin secretion/activation protein |
| 5106 | JAALYZ010000027.1 | NSY72668.1 | open | 453 [NA] | 150 [AA] | 1267-1719 | G6L43_26275 | hypothetical protein |
| 5107 | JAALYZ010000027.1 | NSY72669.1 | open | 2666 [NA] | 889 [AA] | 1756->4421 | G6L43_26280 | filamentous hemagglutinin N-terminal domain-containing protein |
| 5108 | JAALYZ010000028.1 | NSY72670.1 | open | 1701 [NA] | 566 [AA] | 1572-3272 | G6L43_26300 | hypothetical protein |
| 5109 | JAALYZ010000029.1 | NSY72671.1 | open | 1254 [NA] | 418 [AA] | <1-1254 | G6L43_26310 | hypothetical protein |
| 5110 | JAALYZ010000029.1 | NSY72672.1 | open | 1152 [NA] | 383 [AA] | 2507->3660 | G6L43_26320 | IS110 family transposase |
| 5111 | JAALYZ010000030.1 | NSY72673.1 | open | 3295 [NA] | 1098 [AA] | 165->3459 | G6L43_26325 | autotransporter outer membrane beta-barrel domain-containing protein |
| 5112 | JAALYZ010000032.1 | NSY72674.1 | open | 894 [NA] | 297 [AA] | 51-944 | G6L43_26335 | ATP-binding protein |
| 5113 | JAALYZ010000032.1 | NSY72675.1 | open | 1476 [NA] | 491 [AA] | 941-2416 | G6L43_26340 | IS21 family transposase |
| 5114 | JAALYZ010000033.1 | NSY72676.1 | open | 345 [NA] | 114 [AA] | 1369-1713 | G6L43_26350 | MarR family transcriptional regulator |
| 5115 | JAALYZ010000034.1 | NSY72677.1 | open | 195 [NA] | 64 [AA] | 333-527 | G6L43_26365 | hypothetical protein |
| 5116 | JAALYZ010000034.1 | NSY72678.1 | open | 1251 [NA] | 417 [AA] | 1283->2533 | G6L43_26370 | HAF repeat-containing protein |
| 5117 | JAALYZ010000035.1 | NSY72679.1 | open | 1080 [NA] | 359 [AA] | 919-1998 | G6L43_26385 | HAF repeat-containing protein |
| 5118 | JAALYZ010000035.1 | NSY72680.1 | open | 201 [NA] | 67 [AA] | 2014->2214 | G6L43_26390 | hypothetical protein |
| 5119 | JAALYZ010000037.1 | NSY72681.1 | open | 1167 [NA] | 388 [AA] | 83-1249 | G6L43_26400 | IS110 family transposase |
| 5120 | JAALYZ010000039.1 | NSY72682.1 | open | 690 [NA] | 229 [AA] | 337-1026 | G6L43_26425 | aquaporin Z |
| 5121 | JAALYZ010000040.1 | NSY72683.1 | open | 1001 [NA] | 333 [AA] | <1->1001 | G6L43_26430 | autotransporter outer membrane beta-barrel domain-containing protein |