Genome Explorer: Agrobacterium tumefaciens 17-1474-1c (SEQF8762.1)
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NCBI Annotation for SEQF8762.1
| Genome selected: Agrobacterium tumefaciens 17-1474-1c | |||
| Contigs: | 64 | Bases: | 6010666 bps |
| CDS: | 130 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5501 | JAAMBS010000063.1 | NTD72700.1 | open | 1110 [NA] | 369 [AA] | 119085-120194 | G6M30_28420 | carbon-phosphorus lyase complex subunit PhnI |
| 5502 | JAAMBS010000063.1 | NTD72701.1 | open | 609 [NA] | 202 [AA] | 120196-120804 | G6M30_28425 | phosphonate C-P lyase system protein PhnH |
| 5503 | JAAMBS010000063.1 | NTD72702.1 | open | 462 [NA] | 153 [AA] | 120804-121265 | G6M30_28430 | phosphonate C-P lyase system protein PhnG |
| 5504 | JAAMBS010000063.1 | NTD72703.1 | open | 738 [NA] | 245 [AA] | 121348-122085 | G6M30_28435 | phosphonate metabolism transcriptional regulator PhnF |
| 5505 | JAAMBS010000063.1 | NTD72704.1 | open | 642 [NA] | 213 [AA] | 122108->122751 | G6M30_28440 | 4-hydroxy-tetrahydrodipicolinate reductase |
| 5506 | JAAMBS010000063.1 | NTD72705.1 | open | 299 [NA] | 99 [AA] | <122852-123150 | G6M30_28445 | 4-hydroxy-tetrahydrodipicolinate reductase |
| 5507 | JAAMBS010000063.1 | NTD72706.1 | open | 1023 [NA] | 340 [AA] | 123266-124288 | G6M30_28450 | glucokinase |
| 5508 | JAAMBS010000063.1 | NTD72707.1 | open | 384 [NA] | 127 [AA] | 124310-124693 | G6M30_28455 | methylglyoxal synthase |
| 5509 | JAAMBS010000063.1 | NTD72708.1 | open | 1050 [NA] | 349 [AA] | 124795-125844 | G6M30_28460 | penicillin-insensitive murein endopeptidase |
| 5510 | JAAMBS010000063.1 | NTD72709.1 | open | 1845 [NA] | 614 [AA] | 126051-127895 | G6M30_28465 | ABC transporter substrate-binding protein |
| 5511 | JAAMBS010000063.1 | NTD72710.1 | open | 1095 [NA] | 364 [AA] | 128038-129132 | G6M30_28470 | microcin C ABC transporter permease YejB |
| 5512 | JAAMBS010000063.1 | NTD72711.1 | open | 1146 [NA] | 381 [AA] | 129132-130277 | G6M30_28475 | ABC transporter permease |
| 5513 | JAAMBS010000063.1 | NTD72712.1 | open | 1650 [NA] | 549 [AA] | 130274-131923 | G6M30_28480 | ABC transporter ATP-binding protein |
| 5514 | JAAMBS010000063.1 | NTD72713.1 | open | 1248 [NA] | 415 [AA] | 132026-133273 | G6M30_28485 | FAD-binding oxidoreductase |
| 5515 | JAAMBS010000063.1 | NTD72714.1 | open | 1362 [NA] | 453 [AA] | 133509-134870 | G6M30_28490 | glutamine synthetase |
| 5516 | JAAMBS010000063.1 | NTD72715.1 | open | 1302 [NA] | 433 [AA] | 134872-136173 | G6M30_28495 | FAD-binding oxidoreductase |
| 5517 | JAAMBS010000063.1 | NTD72716.1 | open | 489 [NA] | 162 [AA] | 136170-136658 | G6M30_28500 | gluconokinase |
| 5518 | JAAMBS010000063.1 | NTD72717.1 | open | 741 [NA] | 246 [AA] | 136767-137507 | G6M30_28505 | ABC transporter permease |
| 5519 | JAAMBS010000063.1 | NTD72718.1 | open | 939 [NA] | 312 [AA] | 137504-138442 | G6M30_28510 | ABC transporter ATP-binding protein |
| 5520 | JAAMBS010000063.1 | NTD72719.1 | open | 1167 [NA] | 388 [AA] | 138439-139605 | G6M30_28515 | ABC transporter permease |
| 5521 | JAAMBS010000063.1 | NTD72720.1 | open | 912 [NA] | 303 [AA] | 139691-140602 | G6M30_28520 | ABC transporter substrate-binding protein |
| 5522 | JAAMBS010000063.1 | NTD72721.1 | open | 1047 [NA] | 348 [AA] | 140744-141790 | G6M30_28525 | AbrB family transcriptional regulator |
| 5523 | JAAMBS010000063.1 | NTD72722.1 | open | 471 [NA] | 156 [AA] | 141961-142431 | G6M30_28530 | iron-responsive transcriptional regulator RirA |
| 5524 | JAAMBS010000063.1 | NTD72723.1 | open | 1065 [NA] | 354 [AA] | 142590-143654 | G6M30_28535 | Fe(3+) ABC transporter substrate-binding protein |
| 5525 | JAAMBS010000063.1 | NTD72724.1 | open | 1497 [NA] | 498 [AA] | 143733-145229 | G6M30_28540 | CoA-acylating methylmalonate-semialdehyde dehydrogenase |
| 5526 | JAAMBS010000063.1 | NTD72725.1 | open | 315 [NA] | 104 [AA] | 145405-145719 | G6M30_28545 | antibiotic biosynthesis monooxygenase |
| 5527 | JAAMBS010000063.1 | NTD72726.1 | open | 882 [NA] | 293 [AA] | 145716-146597 | G6M30_28550 | LysR family transcriptional regulator |
| 5528 | JAAMBS010000063.1 | NTD72727.1 | open | 921 [NA] | 306 [AA] | 146714-147634 | G6M30_28555 | DMT family transporter |
| 5529 | JAAMBS010000063.1 | NTD72728.1 | open | 1107 [NA] | 368 [AA] | 147942-149048 | G6M30_28560 | DUF475 domain-containing protein |
| 5530 | JAAMBS010000063.1 | NTD72729.1 | open | 345 [NA] | 114 [AA] | 149417-149761 | G6M30_28565 | winged helix-turn-helix transcriptional regulator |
| 5531 | JAAMBS010000063.1 | NTD72730.1 | open | 852 [NA] | 283 [AA] | 149779-150630 | G6M30_28570 | C40 family peptidase |
| 5532 | JAAMBS010000063.1 | NTD72731.1 | open | 360 [NA] | 119 [AA] | 150725-151084 | G6M30_28575 | hypothetical protein |
| 5533 | JAAMBS010000063.1 | NTD72732.1 | open | 1305 [NA] | 434 [AA] | 151243-152547 | G6M30_28580 | nicotinate phosphoribosyltransferase |
| 5534 | JAAMBS010000063.1 | NTD72733.1 | open | 1395 [NA] | 464 [AA] | 152612-154006 | G6M30_28585 | leucyl aminopeptidase |
| 5535 | JAAMBS010000063.1 | NTD72734.1 | open | 825 [NA] | 274 [AA] | 154149-154973 | G6M30_28590 | tetratricopeptide repeat protein |
| 5536 | JAAMBS010000063.1 | NTD72735.1 | open | 987 [NA] | 328 [AA] | 155071-156057 | G6M30_28595 | type II secretion system F family protein |
| 5537 | JAAMBS010000063.1 | NTD72736.1 | open | 1005 [NA] | 334 [AA] | 156068-157072 | G6M30_28600 | type II secretion system F family protein |
| 5538 | JAAMBS010000063.1 | NTD72737.1 | open | 1473 [NA] | 490 [AA] | 157191-158663 | G6M30_28605 | CpaF family protein |
| 5539 | JAAMBS010000063.1 | NTD72738.1 | open | 1284 [NA] | 427 [AA] | 158697-159980 | G6M30_28610 | CtpF protein |
| 5540 | JAAMBS010000063.1 | NTD72739.1 | open | 690 [NA] | 229 [AA] | 160015-160704 | G6M30_28615 | CpaD family pilus assembly lipoprotein |
| 5541 | JAAMBS010000063.1 | NTD72740.1 | open | 1584 [NA] | 527 [AA] | 160761-162344 | G6M30_28620 | type II and III secretion system protein family protein |
| 5542 | JAAMBS010000063.1 | NTD72741.1 | open | 807 [NA] | 268 [AA] | 162341-163147 | G6M30_28625 | Flp pilus assembly protein CpaB |
| 5543 | JAAMBS010000063.1 | NTD72742.1 | open | 513 [NA] | 170 [AA] | 163273-163785 | G6M30_28630 | peptidase |
| 5544 | JAAMBS010000063.1 | NTD72743.1 | open | 183 [NA] | 60 [AA] | 163869-164051 | G6M30_28635 | Flp family type IVb pilin |
| 5545 | JAAMBS010000063.1 | NTD72744.1 | open | 411 [NA] | 136 [AA] | 164470-164880 | G6M30_28640 | hypothetical protein |
| 5546 | JAAMBS010000063.1 | NTD72745.1 | open | 306 [NA] | 101 [AA] | 165328-165633 | G6M30_28650 | SelT/SelW/SelH family protein |
| 5547 | JAAMBS010000063.1 | NTD72746.1 | open | 450 [NA] | 149 [AA] | 165779-166228 | G6M30_28655 | DoxX family protein |
| 5548 | JAAMBS010000063.1 | NTD72747.1 | open | 699 [NA] | 232 [AA] | 166367-167065 | G6M30_28660 | type 1 glutamine amidotransferase |
| 5549 | JAAMBS010000063.1 | NTD72748.1 | open | 189 [NA] | 62 [AA] | 167152-167340 | G6M30_28665 | YegP family protein |
| 5550 | JAAMBS010000063.1 | NTD72749.1 | open | 1098 [NA] | 365 [AA] | 167518-168615 | G6M30_28670 | glycoside hydrolase family 25 protein |
| 5551 | JAAMBS010000063.1 | NTD72750.1 | open | 876 [NA] | 291 [AA] | 168627-169502 | G6M30_28675 | DMT family transporter |
| 5552 | JAAMBS010000063.1 | NTD72751.1 | open | 1398 [NA] | 465 [AA] | 169619-171016 | G6M30_28680 | PLP-dependent aminotransferase family protein |
| 5553 | JAAMBS010000063.1 | NTD72752.1 | open | 318 [NA] | 105 [AA] | 171108-171425 | G6M30_28685 | hypothetical protein |
| 5554 | JAAMBS010000063.1 | NTD72753.1 | open | 459 [NA] | 152 [AA] | 171496-171954 | G6M30_28690 | Rrf2 family transcriptional regulator |
| 5555 | JAAMBS010000063.1 | NTD72754.1 | open | 888 [NA] | 295 [AA] | 172105-172992 | G6M30_28695 | NAD(P)/FAD-dependent oxidoreductase |
| 5556 | JAAMBS010000063.1 | NTD72755.1 | open | 783 [NA] | 260 [AA] | 172993-173775 | G6M30_28700 | AraC family transcriptional regulator |
| 5557 | JAAMBS010000063.1 | NTD72756.1 | open | 408 [NA] | 135 [AA] | 173870-174277 | G6M30_28705 | DUF2000 family protein |
| 5558 | JAAMBS010000063.1 | NTD72757.1 | open | 1839 [NA] | 612 [AA] | 174349-176187 | G6M30_28710 | elongation factor 4 |
| 5559 | JAAMBS010000063.1 | NTD72758.1 | open | 870 [NA] | 289 [AA] | 176249-177118 | G6M30_28715 | carbon-nitrogen hydrolase family protein |
| 5560 | JAAMBS010000063.1 | NTD72759.1 | open | 609 [NA] | 202 [AA] | 177115-177723 | G6M30_28720 | GNAT family N-acetyltransferase |
| 5561 | JAAMBS010000063.1 | NTD72760.1 | open | 402 [NA] | 133 [AA] | 177797-178198 | G6M30_28725 | SnoaL-like domain-containing protein |
| 5562 | JAAMBS010000063.1 | NTD72761.1 | open | 582 [NA] | 193 [AA] | 178294-178875 | G6M30_28730 | XRE family transcriptional regulator |
| 5563 | JAAMBS010000063.1 | NTD72762.1 | open | 519 [NA] | 172 [AA] | 178898-179416 | G6M30_28735 | GNAT family N-acetyltransferase |
| 5564 | JAAMBS010000063.1 | NTD72763.1 | open | 1077 [NA] | 358 [AA] | 179427-180503 | G6M30_28740 | dienelactone hydrolase |
| 5565 | JAAMBS010000063.1 | NTD72764.1 | open | 1089 [NA] | 362 [AA] | 180647-181735 | G6M30_28745 | helix-turn-helix domain-containing protein |
| 5566 | JAAMBS010000063.1 | NTD72765.1 | open | 1104 [NA] | 367 [AA] | 181739-182842 | G6M30_28750 | TRAP transporter substrate-binding protein |
| 5567 | JAAMBS010000063.1 | NTD72766.1 | open | 474 [NA] | 157 [AA] | 182981-183454 | G6M30_28755 | truncated hemoglobin |
| 5568 | JAAMBS010000063.1 | NTD72767.1 | open | 984 [NA] | 327 [AA] | 183595-184578 | G6M30_28760 | rubrerythrin family protein |
| 5569 | JAAMBS010000063.1 | NTD72768.1 | open | 615 [NA] | 204 [AA] | 184642-185256 | G6M30_28765 | transglutaminase-like cysteine peptidase |
| 5570 | JAAMBS010000063.1 | NTD72769.1 | open | 789 [NA] | 262 [AA] | 185375-186163 | G6M30_28770 | alpha/beta hydrolase |
| 5571 | JAAMBS010000063.1 | NTD72770.1 | open | 537 [NA] | 178 [AA] | 186351-186887 | G6M30_28775 | translation initiation factor IF-3 |
| 5572 | JAAMBS010000063.1 | NTD72771.1 | open | 204 [NA] | 67 [AA] | 187082-187285 | G6M30_28780 | 50S ribosomal protein L35 |
| 5573 | JAAMBS010000063.1 | NTD72772.1 | open | 405 [NA] | 134 [AA] | 187326-187730 | G6M30_28785 | 50S ribosomal protein L20 |
| 5574 | JAAMBS010000063.1 | NTD72773.1 | open | 879 [NA] | 292 [AA] | 187896-188774 | G6M30_28790 | serine/threonine protein phosphatase |
| 5575 | JAAMBS010000063.1 | NTD72774.1 | open | 1083 [NA] | 360 [AA] | 188767-189849 | G6M30_28795 | phenylalanine--tRNA ligase subunit alpha |
| 5576 | JAAMBS010000063.1 | NTD72775.1 | open | 2424 [NA] | 807 [AA] | 189874-192297 | G6M30_28800 | phenylalanine--tRNA ligase subunit beta |
| 5577 | JAAMBS010000063.1 | NTD72776.1 | open | 1002 [NA] | 333 [AA] | 192353-193354 | G6M30_28805 | aldo/keto reductase |
| 5578 | JAAMBS010000063.1 | NTD72777.1 | open | 120 [NA] | 39 [AA] | 194157->194277 | G6M30_28815 | LysR family transcriptional regulator |
| 5579 | JAAMBS010000064.1 | NTD72778.1 | open | 246 [NA] | 81 [AA] | <1-247 | G6M30_28820 | phage portal protein |
| 5580 | JAAMBS010000064.1 | NTD72779.1 | open | 387 [NA] | 129 [AA] | 254->640 | G6M30_28825 | HK97 family phage prohead protease |