Genome Explorer: Aggregatibacter actinomycetemcomitans PN_688 (SEQF3512.1)
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NCBI Annotation for SEQF3512.1
| Genome selected: Aggregatibacter actinomycetemcomitans PN_688 | |||
| Contigs: | 77 | Bases: | 2246979 bps |
| CDS: | 116 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 47 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | VSEO01000038.1 | TYB07303.1 | open | 2082 [NA] | 693 [AA] | 1366-3447 | FXE07_10750 | ATP-dependent DNA helicase RecG |
| 2002 | VSEO01000038.1 | TYB07304.1 | open | 2124 [NA] | 707 [AA] | 3449-5572 | FXE07_10755 | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
| 2003 | VSEO01000038.1 | TYB07305.1 | open | 267 [NA] | 88 [AA] | 5618-5884 | FXE07_10760 | DNA-directed RNA polymerase subunit omega |
| 2004 | VSEO01000038.1 | TYB07306.1 | open | 639 [NA] | 212 [AA] | 5942-6580 | FXE07_10765 | guanylate kinase |
| 2005 | VSEO01000038.1 | TYB07307.1 | open | 1005 [NA] | 334 [AA] | 6823-7827 | FXE07_10770 | type I glyceraldehyde-3-phosphate dehydrogenase |
| 2006 | VSEO01000038.1 | TYB07308.1 | open | 198 [NA] | 65 [AA] | 8033-8230 | FXE07_10775 | hypothetical protein |
| 2007 | VSEO01000038.1 | TYB07309.1 | open | 303 [NA] | 100 [AA] | 8791-9093 | FXE07_10780 | RNA-directed DNA polymerase |
| 2008 | VSEO01000038.1 | TYB07310.1 | open | 231 [NA] | 76 [AA] | 9105-9335 | FXE07_10785 | RNA-directed DNA polymerase |
| 2009 | VSEO01000038.1 | TYB07311.1 | open | 180 [NA] | 59 [AA] | 9322-9501 | FXE07_10790 | hypothetical protein |
| 2010 | VSEO01000038.1 | TYB07312.1 | open | 657 [NA] | 218 [AA] | 10327-10983 | FXE07_10805 | IS3 family transposase |
| 2011 | VSEO01000038.1 | TYB07313.1 | open | 477 [NA] | 158 [AA] | 11315-11791 | FXE07_10810 | hypothetical protein |
| 2012 | VSEO01000038.1 | TYB07314.1 | open | 81 [NA] | 26 [AA] | 12104->12186 | FXE07_10815 | IS5/IS1182 family transposase |
| 2013 | VSEO01000039.1 | TYB07263.1 | open | 255 [NA] | 84 [AA] | 646-900 | FXE07_10820 | hypothetical protein |
| 2014 | VSEO01000039.1 | TYB07264.1 | open | 801 [NA] | 266 [AA] | 1056-1856 | FXE07_10825 | inositol-1-monophosphatase |
| 2015 | VSEO01000039.1 | TYB07265.1 | open | 741 [NA] | 246 [AA] | 2007-2747 | FXE07_10830 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ |
| 2016 | VSEO01000039.1 | TYB07266.1 | open | 474 [NA] | 157 [AA] | 2809-3282 | FXE07_10835 | Fe-S cluster assembly transcriptional regulator IscR |
| 2017 | VSEO01000039.1 | TYB07267.1 | open | 1215 [NA] | 404 [AA] | 3336-4550 | FXE07_10840 | IscS subfamily cysteine desulfurase |
| 2018 | VSEO01000039.1 | TYB07268.1 | open | 384 [NA] | 127 [AA] | 4610-4993 | FXE07_10845 | Fe-S cluster assembly scaffold IscU |
| 2019 | VSEO01000039.1 | TYB07269.1 | open | 324 [NA] | 107 [AA] | 5125-5448 | FXE07_10850 | iron-sulfur cluster assembly protein IscA |
| 2020 | VSEO01000039.1 | TYB07270.1 | open | 522 [NA] | 173 [AA] | 5460-5981 | FXE07_10855 | Fe-S protein assembly co-chaperone HscB |
| 2021 | VSEO01000039.1 | TYB07271.1 | open | 1860 [NA] | 619 [AA] | 6002-7861 | FXE07_10860 | Fe-S protein assembly chaperone HscA |
| 2022 | VSEO01000039.1 | TYB07272.1 | open | 342 [NA] | 113 [AA] | 7873-8214 | FXE07_10865 | ISC system 2Fe-2S type ferredoxin |
| 2023 | VSEO01000039.1 | TYB07273.1 | open | 195 [NA] | 64 [AA] | 8214-8408 | FXE07_10870 | Fe-S cluster assembly protein IscX |
| 2024 | VSEO01000039.1 | TYB07274.1 | open | 2061 [NA] | 686 [AA] | 8542-10602 | FXE07_10875 | methionine--tRNA ligase |
| 2025 | VSEO01000039.1 | TYB07275.1 | open | 1113 [NA] | 370 [AA] | 10775-11887 | FXE07_10880 | iron-sulfur cluster carrier protein ApbC |
| 2026 | VSEO01000040.1 | TYB07255.1 | open | 645 [NA] | 214 [AA] | 3489-4133 | FXE07_10900 | hypothetical protein |
| 2027 | VSEO01000040.1 | TYB07256.1 | open | 792 [NA] | 263 [AA] | 7896-8687 | FXE07_10930 | hypothetical protein |
| 2028 | VSEO01000040.1 | TYB07257.1 | open | 798 [NA] | 265 [AA] | 4130-4927 | FXE07_10905 | calcium-binding protein |
| 2029 | VSEO01000040.1 | TYB07258.1 | open | 621 [NA] | 206 [AA] | 5762-6382 | FXE07_10915 | hypothetical protein |
| 2030 | VSEO01000040.1 | TYB07259.1 | open | 699 [NA] | 232 [AA] | 6439-7137 | FXE07_10920 | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
| 2031 | VSEO01000041.1 | TYB07234.1 | open | 942 [NA] | 313 [AA] | 10-951 | FXE07_10935 | sugar ABC transporter substrate-binding protein |
| 2032 | VSEO01000041.1 | TYB07235.1 | open | 1488 [NA] | 495 [AA] | 1114-2601 | FXE07_10940 | sugar ABC transporter ATP-binding protein |
| 2033 | VSEO01000041.1 | TYB07236.1 | open | 1029 [NA] | 342 [AA] | 2617-3645 | FXE07_10945 | ABC transporter permease |
| 2034 | VSEO01000041.1 | TYB07237.1 | open | 1458 [NA] | 485 [AA] | 3651-5108 | FXE07_10950 | carbohydrate kinase |
| 2035 | VSEO01000041.1 | TYB07238.1 | open | 2316 [NA] | 771 [AA] | 5156-7471 | FXE07_10955 | RNA-binding transcriptional accessory protein |
| 2036 | VSEO01000042.1 | TYB07008.1 | open | 1947 [NA] | 648 [AA] | 129-2075 | FXE07_10960 | ABC transporter ATP-binding protein |
| 2037 | VSEO01000042.1 | TYB07009.1 | open | 303 [NA] | 100 [AA] | 2228-2530 | FXE07_10965 | type II toxin-antitoxin system RelE/ParE family toxin |
| 2038 | VSEO01000042.1 | TYB07010.1 | open | 294 [NA] | 97 [AA] | 2532-2825 | FXE07_10970 | putative addiction module antidote protein |
| 2039 | VSEO01000042.1 | TYB07011.1 | open | 1353 [NA] | 450 [AA] | 2862-4214 | FXE07_10975 | deoxyguanosinetriphosphate triphosphohydrolase family protein |
| 2040 | VSEO01000042.1 | TYB07012.1 | open | 693 [NA] | 230 [AA] | 4216-4908 | FXE07_10980 | CidB/LrgB family autolysis modulator |
| 2041 | VSEO01000042.1 | TYB07013.1 | open | 411 [NA] | 136 [AA] | 4908-5318 | FXE07_10985 | hypothetical protein |
| 2042 | VSEO01000042.1 | TYB07014.1 | open | 1002 [NA] | 333 [AA] | 5894-6895 | FXE07_10995 | tyrosine-type recombinase/integrase |
| 2043 | VSEO01000043.1 | TYB06357.1 | open | 1932 [NA] | 643 [AA] | 31-1962 | FXE07_11005 | threonine--tRNA ligase |
| 2044 | VSEO01000043.1 | TYB06358.1 | open | 189 [NA] | 62 [AA] | 1998-2186 | FXE07_11010 | hypothetical protein |
| 2045 | VSEO01000043.1 | TYB06359.1 | open | 876 [NA] | 291 [AA] | 2202-3077 | FXE07_11015 | fructosamine kinase family protein |
| 2046 | VSEO01000043.1 | TYB06360.1 | open | 333 [NA] | 110 [AA] | 3345-3677 | FXE07_11020 | multidrug efflux SMR transporter |
| 2047 | VSEO01000043.1 | TYB06361.1 | open | 945 [NA] | 314 [AA] | 3841-4785 | FXE07_11025 | 2-hydroxyacid dehydrogenase |
| 2048 | VSEO01000043.1 | TYB06362.1 | open | 567 [NA] | 188 [AA] | 4941-5507 | FXE07_11030 | anthranilate synthase component II |
| 2049 | VSEO01000043.1 | TYB06363.1 | open | 975 [NA] | 324 [AA] | 5610-6584 | FXE07_11035 | aminodeoxychorismate synthase component I |
| 2050 | VSEO01000043.1 | TYB06364.1 | open | 506 [NA] | 168 [AA] | 6587->7092 | FXE07_11040 | hypothetical protein |
| 2051 | VSEO01000044.1 | TYB06162.1 | open | 660 [NA] | 219 [AA] | 166-825 | FXE07_11045 | bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA |
| 2052 | VSEO01000044.1 | TYB06163.1 | open | 690 [NA] | 229 [AA] | 1206-1895 | FXE07_11050 | nicotinamide riboside transporter PnuC |
| 2053 | VSEO01000044.1 | TYB06164.1 | open | 708 [NA] | 235 [AA] | 1970-2677 | FXE07_11055 | tRNA1(Val) (adenine(37)-N6)-methyltransferase |
| 2054 | VSEO01000044.1 | TYB06165.1 | open | 1332 [NA] | 443 [AA] | 2767-4098 | FXE07_11060 | ATP-dependent RNA helicase SrmB |
| 2055 | VSEO01000044.1 | TYB06166.1 | open | 1305 [NA] | 434 [AA] | 4504-5808 | FXE07_11070 | ATP-binding protein |
| 2056 | VSEO01000045.1 | TYB06158.1 | open | 621 [NA] | 206 [AA] | <1-622 | FXE07_11075 | sel1 repeat family protein |
| 2057 | VSEO01000045.1 | TYB06159.1 | open | 831 [NA] | 276 [AA] | 1553-2383 | FXE07_11080 | 5-deoxy-glucuronate isomerase |
| 2058 | VSEO01000045.1 | TYB06160.1 | open | 804 [NA] | 267 [AA] | 2647-3450 | FXE07_11085 | inositol monophosphatase |
| 2059 | VSEO01000045.1 | TYB06161.1 | open | 1344 [NA] | 447 [AA] | 3468-4811 | FXE07_11090 | MFS transporter |
| 2060 | VSEO01000046.1 | TYB06155.1 | open | 195 [NA] | 64 [AA] | 80-274 | FXE07_11095 | hypothetical protein |
| 2061 | VSEO01000046.1 | TYB06156.1 | open | 1011 [NA] | 336 [AA] | 3576-4586 | FXE07_11110 | WD40 repeat domain-containing protein |
| 2062 | VSEO01000046.1 | TYB06157.1 | open | 2121 [NA] | 706 [AA] | 1453-3573 | FXE07_11105 | alpha/beta hydrolase |
| 2063 | VSEO01000047.1 | TYB06151.1 | open | 261 [NA] | 86 [AA] | 65-325 | FXE07_11115 | hypothetical protein |
| 2064 | VSEO01000047.1 | TYB06152.1 | open | 2967 [NA] | 988 [AA] | 315-3281 | FXE07_11120 | hypothetical protein |
| 2065 | VSEO01000047.1 | TYB06153.1 | open | 582 [NA] | 193 [AA] | 3285-3866 | FXE07_11125 | hypothetical protein |
| 2066 | VSEO01000047.1 | TYB06154.1 | open | 585 [NA] | 194 [AA] | 3876-4460 | FXE07_11130 | hypothetical protein |
| 2067 | VSEO01000048.1 | TYB06146.1 | open | 189 [NA] | 62 [AA] | 63-251 | FXE07_11135 | hypothetical protein |
| 2068 | VSEO01000048.1 | TYB06147.1 | open | 450 [NA] | 149 [AA] | 425-874 | FXE07_11140 | LexA family transcriptional regulator |
| 2069 | VSEO01000048.1 | TYB06148.1 | open | 1467 [NA] | 488 [AA] | 1582-3048 | FXE07_11150 | IMP dehydrogenase |
| 2070 | VSEO01000048.1 | TYB06149.1 | open | 204 [NA] | 67 [AA] | 4209-4412 | FXE07_11160 | glycine zipper 2TM domain-containing protein |
| 2071 | VSEO01000048.1 | TYB06150.1 | open | 72 [NA] | 23 [AA] | 941-1012 | FXE07_11145 | IS3 family transposase |
| 2072 | VSEO01000049.1 | TYB06143.1 | open | 192 [NA] | 63 [AA] | 73-264 | FXE07_11165 | hypothetical protein |
| 2073 | VSEO01000049.1 | TYB06144.1 | open | 867 [NA] | 288 [AA] | 659-1525 | FXE07_11170 | hypothetical protein |
| 2074 | VSEO01000049.1 | TYB06145.1 | open | 2805 [NA] | 934 [AA] | 1529-4333 | FXE07_11175 | hypothetical protein |
| 2075 | VSEO01000050.1 | TYB06139.1 | open | 1176 [NA] | 391 [AA] | 40-1215 | FXE07_11180 | hypothetical protein |
| 2076 | VSEO01000050.1 | TYB06140.1 | open | 2292 [NA] | 763 [AA] | 1236-3527 | FXE07_11185 | hypothetical protein |
| 2077 | VSEO01000050.1 | TYB06141.1 | open | 633 [NA] | 210 [AA] | 3509-4141 | FXE07_11190 | hypothetical protein |
| 2078 | VSEO01000050.1 | TYB06142.1 | open | 243 [NA] | 80 [AA] | 4152-4394 | FXE07_11195 | hypothetical protein |
| 2079 | VSEO01000052.1 | TYB06136.1 | open | 180 [NA] | 59 [AA] | 2912-3091 | FXE07_11220 | hypothetical protein |
| 2080 | VSEO01000052.1 | TYB06137.1 | open | 1191 [NA] | 396 [AA] | 1805-2995 | FXE07_11215 | hypothetical protein |
| 2081 | VSEO01000052.1 | TYB06138.1 | open | 1590 [NA] | 529 [AA] | 196-1785 | FXE07_11210 | hypothetical protein |
| 2082 | VSEO01000053.1 | TYB06135.1 | open | 159 [NA] | 52 [AA] | 2383-2541 | FXE07_11230 | PAAR domain-containing protein |
| 2083 | VSEO01000054.1 | TYB06131.1 | open | 195 [NA] | 65 [AA] | <1-195 | FXE07_11235 | phospholipase |
| 2084 | VSEO01000054.1 | TYB06132.1 | open | 213 [NA] | 70 [AA] | 227-439 | FXE07_11240 | hypothetical protein |
| 2085 | VSEO01000054.1 | TYB06133.1 | open | 903 [NA] | 300 [AA] | 687-1589 | FXE07_11250 | hypothetical protein |
| 2086 | VSEO01000054.1 | TYB06134.1 | open | 249 [NA] | 82 [AA] | 1574->1822 | FXE07_11255 | hypothetical protein |
| 2087 | VSEO01000055.1 | TYB06035.1 | open | 987 [NA] | 329 [AA] | <1-987 | FXE07_11260 | phospholipase |
| 2088 | VSEO01000057.1 | TYB06033.1 | open | 1026 [NA] | 341 [AA] | 77-1102 | FXE07_11275 | hypothetical protein |
| 2089 | VSEO01000057.1 | TYB06034.1 | open | 432 [NA] | 143 [AA] | 1115-1546 | FXE07_11280 | hypothetical protein |
| 2090 | VSEO01000058.1 | TYB06030.1 | open | 336 [NA] | 111 [AA] | 352-687 | FXE07_11290 | hypothetical protein |
| 2091 | VSEO01000058.1 | TYB06031.1 | open | 453 [NA] | 150 [AA] | 1116-1568 | FXE07_11295 | hypothetical protein |
| 2092 | VSEO01000058.1 | TYB06032.1 | open | 300 [NA] | 99 [AA] | 11-310 | FXE07_11285 | hypothetical protein |
| 2093 | VSEO01000059.1 | TYB06028.1 | open | 837 [NA] | 278 [AA] | <1-839 | FXE07_11300 | phospholipase |
| 2094 | VSEO01000059.1 | TYB06029.1 | open | 533 [NA] | 177 [AA] | 839->1371 | FXE07_11305 | sel1 repeat family protein |
| 2095 | VSEO01000060.1 | TYB06026.1 | open | 1008 [NA] | 336 [AA] | <1-1008 | FXE07_11310 | DUF4123 domain-containing protein |
| 2096 | VSEO01000060.1 | TYB06027.1 | open | 240 [NA] | 79 [AA] | 933-1172 | FXE07_11315 | hypothetical protein |
| 2097 | VSEO01000061.1 | TYB06025.1 | open | 1182 [NA] | 393 [AA] | 55->1238 | FXE07_11320 | elongation factor Tu |
| 2098 | VSEO01000062.1 | TYB06023.1 | open | 759 [NA] | 252 [AA] | 380-1138 | FXE07_11330 | sel1 repeat family protein |
| 2099 | VSEO01000062.1 | TYB06024.1 | open | 443 [NA] | 148 [AA] | <1-443 | FXE07_11325 | sel1 repeat family protein |
| 2100 | VSEO01000063.1 | TYB05928.1 | open | 1088 [NA] | 363 [AA] | 16->1103 | FXE07_11335 | DUF4123 domain-containing protein |
| 2101 | VSEO01000064.1 | TYB05927.1 | open | 171 [NA] | 56 [AA] | 102-272 | FXE07_11340 | type IV secretion protein Rhs |
| 2102 | VSEO01000065.1 | TYB05926.1 | open | 1061 [NA] | 354 [AA] | <1->1061 | FXE07_11350 | hypothetical protein |
| 2103 | VSEO01000067.1 | TYB05925.1 | open | 225 [NA] | 74 [AA] | 114-338 | FXE07_11360 | hypothetical protein |
| 2104 | VSEO01000068.1 | TYB05911.1 | open | 258 [NA] | 85 [AA] | 317-574 | FXE07_11370 | transposase |
| 2105 | VSEO01000068.1 | TYB05912.1 | open | 408 [NA] | 136 [AA] | 568->975 | FXE07_11375 | DDE-type integrase/transposase/recombinase |
| 2106 | VSEO01000068.1 | TYB05913.1 | open | 267 [NA] | 88 [AA] | 9-275 | FXE07_11365 | transposase |
| 2107 | VSEO01000069.1 | TYB05816.1 | open | 186 [NA] | 61 [AA] | 174-359 | FXE07_11380 | hypothetical protein |
| 2108 | VSEO01000069.1 | TYB05817.1 | open | 212 [NA] | 71 [AA] | 689->900 | FXE07_11385 | hypothetical protein |
| 2109 | VSEO01000070.1 | TYB05535.1 | open | 138 [NA] | 46 [AA] | <1-138 | FXE07_11390 | phospholipase |
| 2110 | VSEO01000070.1 | TYB05536.1 | open | 783 [NA] | 260 [AA] | 87->869 | FXE07_11395 | phospholipase |
| 2111 | VSEO01000072.1 | TYB05450.1 | open | 719 [NA] | 239 [AA] | <1->719 | FXE07_11405 | DUF4123 domain-containing protein |
| 2112 | VSEO01000073.1 | TYB05449.1 | open | 504 [NA] | 167 [AA] | 119-622 | FXE07_11410 | hypothetical protein |
| 2113 | VSEO01000074.1 | TYB05448.1 | open | 639 [NA] | 213 [AA] | <1->639 | FXE07_11415 | IS5-like element ISAac2 family transposase |
| 2114 | VSEO01000075.1 | TYB05447.1 | open | 435 [NA] | 145 [AA] | 159->593 | FXE07_11420 | type VI secretion system tip protein VgrG |
| 2115 | VSEO01000076.1 | TYB05445.1 | open | 183 [NA] | 60 [AA] | 65-247 | FXE07_11425 | hypothetical protein |
| 2116 | VSEO01000076.1 | TYB05446.1 | open | 189 [NA] | 62 [AA] | 260-448 | FXE07_11430 | hypothetical protein |