Genome Explorer: Treponema pallidum DAL-1 (SEQF1419.1)
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NCBI Annotation for SEQF1419.1
| Genome selected: Treponema pallidum DAL-1 | |||
| Contigs: | 1 | Bases: | 1139971 bps |
| CDS: | 1059 | rRNA: | 6 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | CP003115.1 | AEZ61322.1 | open | 885 [NA] | 294 [AA] | 1072522-1073406 | TPADAL_0986 | DMT superfamily drug/metabolite transporter |
| 1002 | CP003115.1 | AEZ61323.1 | open | 423 [NA] | 140 [AA] | 1073452-1073874 | TPADAL_0987 | hypothetical protein |
| 1003 | CP003115.1 | AEZ61324.1 | open | 600 [NA] | 199 [AA] | 1073926-1074525 | TPADAL_0988 | MarC family multiple antibiotic resistance transporter |
| 1004 | CP003115.1 | AEZ61325.1 | open | 873 [NA] | 290 [AA] | 1074561-1075433 | TPADAL_0989 | hypothetical protein |
| 1005 | CP003115.1 | AEZ61326.1 | open | 234 [NA] | 77 [AA] | 1075240-1075473 | TPADAL_0989a | hypothetical protein |
| 1006 | CP003115.1 | AEZ61327.1 | open | 3102 [NA] | 1033 [AA] | 1075480-1078581 | TPADAL_0990 | conserved hypothetical outer membrane protein |
| 1007 | CP003115.1 | AEZ61328.1 | open | 159 [NA] | 52 [AA] | 1078645-1078803 | TPADAL_0991 | rubredoxin |
| 1008 | CP003115.1 | AEZ61329.1 | open | 288 [NA] | 95 [AA] | 1078836-1079123 | TPADAL_0992 | hypothetical protein |
| 1009 | CP003115.1 | AEZ61330.1 | open | 1026 [NA] | 341 [AA] | 1079192-1080217 | TPADAL_0993 | putative rare lipoprotein A |
| 1010 | CP003115.1 | AEZ61331.1 | open | 297 [NA] | 98 [AA] | 1080411-1080707 | TPADAL_0993a | hypothetical protein |
| 1011 | CP003115.1 | AEZ61332.1 | open | 810 [NA] | 269 [AA] | 1080573-1081382 | TPADAL_0994 | magnesium (Mg2+)-dependent deoxyribonuclease |
| 1012 | CP003115.1 | AEZ61333.1 | open | 1335 [NA] | 444 [AA] | 1081464-1082798 | TPADAL_0995 | putative CAP family transcription factor |
| 1013 | CP003115.1 | AEZ61334.1 | open | 1677 [NA] | 558 [AA] | 1082828-1084504 | TPADAL_0996 | hypothetical protein |
| 1014 | CP003115.1 | AEZ61335.1 | open | 1809 [NA] | 602 [AA] | 1084601-1086409 | TPADAL_0997 | signal peptide peptidase A |
| 1015 | CP003115.1 | AEZ61336.1 | open | 1389 [NA] | 462 [AA] | 1086431-1087819 | TPADAL_0998 | sodium/alanine symporter family protein |
| 1016 | CP003115.1 | AEZ61337.1 | open | 2400 [NA] | 799 [AA] | 1088005-1090404 | TPADAL_0999 | S-DNA-T family septal DNA translocator |
| 1017 | CP003115.1 | AEZ61338.1 | open | 672 [NA] | 223 [AA] | 1090582-1091253 | TPADAL_1000 | hypothetical protein |
| 1018 | CP003115.1 | AEZ61339.1 | open | 1182 [NA] | 393 [AA] | 1091393-1092574 | TPADAL_1001 | hypothetical protein |
| 1019 | CP003115.1 | AEZ61340.1 | open | 756 [NA] | 251 [AA] | 1092588-1093343 | TPADAL_1002 | hypothetical protein |
| 1020 | CP003115.1 | AEZ61341.1 | open | 1038 [NA] | 345 [AA] | 1093451-1094488 | TPADAL_1003 | putative membrane protein |
| 1021 | CP003115.1 | AEZ61342.1 | open | 606 [NA] | 201 [AA] | 1094511-1095116 | TPADAL_1004 | recombination protein R |
| 1022 | CP003115.1 | AEZ61343.1 | open | 1719 [NA] | 572 [AA] | 1095190-1096908 | TPADAL_1005 | DNA-directed DNA polymerase III gamma and tau subunits |
| 1023 | CP003115.1 | AEZ61344.1 | open | 1914 [NA] | 637 [AA] | 1096967-1098880 | TPADAL_1006 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1024 | CP003115.1 | AEZ61345.1 | open | 918 [NA] | 305 [AA] | 1098989-1099906 | TPADAL_1007 | thymidylate synthase (FAD) |
| 1025 | CP003115.1 | AEZ61346.1 | open | 2538 [NA] | 845 [AA] | 1099949-1102486 | TPADAL_1008 | ribonucleotide-diphosphate reductase subunit alpha |
| 1026 | CP003115.1 | AEZ61347.1 | open | 1071 [NA] | 356 [AA] | 1102613-1103683 | TPADAL_1009 | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) |
| 1027 | CP003115.1 | AEZ61348.1 | open | 450 [NA] | 149 [AA] | 1103780-1104229 | TPADAL_1010 | nucleoside-diphosphate kinase |
| 1028 | CP003115.1 | AEZ61349.1 | open | 609 [NA] | 202 [AA] | 1104355-1104963 | TPADAL_1011 | aminoacyl-tRNA hydrolase |
| 1029 | CP003115.1 | AEZ61350.1 | open | 936 [NA] | 311 [AA] | 1104998-1105933 | TPADAL_1012 | DNA-directed RNA polymerase sigma subunit RpoD |
| 1030 | CP003115.1 | AEZ61351.1 | open | 267 [NA] | 88 [AA] | 1106138-1106404 | TPADAL_1013 | chaperone GroES |
| 1031 | CP003115.1 | AEZ61352.1 | open | 1917 [NA] | 638 [AA] | 1106415-1108331 | TPADAL_1014 | hypothetical protein |
| 1032 | CP003115.1 | AEZ61353.1 | open | 426 [NA] | 141 [AA] | 1108315-1108740 | TPADAL_1015 | transcription antitermination protein NusB |
| 1033 | CP003115.1 | AEZ61354.1 | open | 1086 [NA] | 361 [AA] | 1108737-1109822 | TPADAL_1016 | putative peptidylprolyl isomerase |
| 1034 | CP003115.1 | AEZ61355.1 | open | 1818 [NA] | 605 [AA] | 1109895-1111712 | TPADAL_1017 | alanine--tRNA ligase |
| 1035 | CP003115.1 | AEZ61356.1 | open | 192 [NA] | 63 [AA] | 1111757-1111948 | TPADAL_1017a | hypothetical protein |
| 1036 | CP003115.1 | AEZ61357.1 | open | 1515 [NA] | 504 [AA] | 1111884-1113398 | TPADAL_1018 | hypothetical protein |
| 1037 | CP003115.1 | AEZ61358.1 | open | 444 [NA] | 147 [AA] | 1113420-1113863 | TPADAL_1019 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
| 1038 | CP003115.1 | AEZ61359.1 | open | 1521 [NA] | 506 [AA] | 1113864-1115384 | TPADAL_1020 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A |
| 1039 | CP003115.1 | AEZ61360.1 | open | 1530 [NA] | 509 [AA] | 1115377-1116906 | TPADAL_1021 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B |
| 1040 | CP003115.1 | AEZ61361.1 | open | 1368 [NA] | 455 [AA] | 1117002-1118369 | TPADAL_1022 | DNA repair protein Sms |
| 1041 | CP003115.1 | AEZ61362.1 | open | 669 [NA] | 222 [AA] | 1118416-1119084 | TPADAL_1023 | recombination regulator RecX |
| 1042 | CP003115.1 | AEZ61363.1 | open | 390 [NA] | 129 [AA] | 1119038-1119427 | TPADAL_1024 | ribosomal protein S9 |
| 1043 | CP003115.1 | AEZ61364.1 | open | 429 [NA] | 142 [AA] | 1119443-1119871 | TPADAL_1025 | ribosomal protein L13 |
| 1044 | CP003115.1 | AEZ61365.1 | open | 288 [NA] | 95 [AA] | 1119868-1120155 | TPADAL_1025a | hypothetical protein |
| 1045 | CP003115.1 | AEZ61366.1 | open | 1770 [NA] | 589 [AA] | 1120304-1122073 | TPADAL_1026 | putative oligoendopeptidase F |
| 1046 | CP003115.1 | AEZ61367.1 | open | 777 [NA] | 258 [AA] | 1122195-1122971 | TPADAL_1027 | uridine phosphorylase |
| 1047 | CP003115.1 | AEZ61368.1 | open | 2013 [NA] | 670 [AA] | 1122987-1124999 | TPADAL_1028 | excision endonuclease subunit UvrD |
| 1048 | CP003115.1 | AEZ61369.1 | open | 687 [NA] | 228 [AA] | 1125082-1125768 | TPADAL_1029 | hypothetical protein |
| 1049 | CP003115.1 | AEZ61370.1 | open | 1545 [NA] | 514 [AA] | 1126314-1127858 | TPADAL_1031 | Tpr protein L |
| 1050 | CP003115.1 | AEZ61371.1 | open | 435 [NA] | 144 [AA] | 1127926-1128360 | TPADAL_1032 | hypothetical protein |
| 1051 | CP003115.1 | AEZ61372.1 | open | 936 [NA] | 311 [AA] | 1128372-1129307 | TPADAL_1033 | patatin family phospholipase |
| 1052 | CP003115.1 | AEZ61373.1 | open | 1026 [NA] | 341 [AA] | 1129381-1130406 | TPADAL_1034 | CaCA family calcium (Ca2+):cation antiporter |
| 1053 | CP003115.1 | AEZ61374.1 | open | 2871 [NA] | 956 [AA] | 1130403-1133273 | TPADAL_1035 | valine--tRNA ligase |
| 1054 | CP003115.1 | AEZ61375.1 | open | 2379 [NA] | 792 [AA] | 1133426-1135804 | TPADAL_1036 | P-ATPase superfamily P-type ATPase transporter |
| 1055 | CP003115.1 | AEZ61376.1 | open | 717 [NA] | 238 [AA] | 1135894-1136610 | TPADAL_1037 | putative hemolysin III |
| 1056 | CP003115.1 | AEZ61377.1 | open | 534 [NA] | 177 [AA] | 1136769-1137302 | TPADAL_1038 | bacterioferrin |
| 1057 | CP003115.1 | AEZ61378.1 | open | 573 [NA] | 190 [AA] | 1137529-1138101 | TPADAL_1039 | adenine phosphoribosyltransferase |
| 1058 | CP003115.1 | AEZ61379.1 | open | 1056 [NA] | 351 [AA] | 1138124-1139179 | TPADAL_1040 | lysine--tRNA ligase |
| 1059 | CP003115.1 | AEZ61380.1 | open | 600 [NA] | 199 [AA] | 1139179-1139778 | TPADAL_1041 | S14 family endopeptidase ClpP |