Genome Explorer: Ralstonia pickettii 092160072-1 (SEQF10169.1)
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NCBI Annotation for SEQF10169.1
| Genome selected: Ralstonia pickettii 092160072-1 | |||
| Contigs: | 41 | Bases: | 5538813 bps |
| CDS: | 127 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 46 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | QGCI01000025.1 | MBX4073007.1 | open | 1053 [NA] | 350 [AA] | 33166-34218 | DEE45_25795 | diguanylate cyclase |
| 5002 | QGCI01000025.1 | MBX4073008.1 | open | 489 [NA] | 162 [AA] | 34482-34970 | DEE45_25800 | Lrp/AsnC family transcriptional regulator |
| 5003 | QGCI01000025.1 | MBX4073009.1 | open | 1932 [NA] | 643 [AA] | 35115-37046 | DEE45_25805 | glutamine--fructose-6-phosphate transaminase (isomerizing) |
| 5004 | QGCI01000025.1 | MBX4073010.1 | open | 855 [NA] | 284 [AA] | 37174-38028 | DEE45_25810 | hypothetical protein |
| 5005 | QGCI01000025.1 | MBX4073011.1 | open | 2553 [NA] | 850 [AA] | 38028-40580 | DEE45_25815 | DUF2309 domain-containing protein |
| 5006 | QGCI01000025.1 | MBX4073012.1 | open | 1575 [NA] | 524 [AA] | 40605-42179 | DEE45_25820 | NADH-quinone oxidoreductase subunit L |
| 5007 | QGCI01000025.1 | MBX4073013.1 | open | 903 [NA] | 300 [AA] | 42279-43181 | DEE45_25825 | LysR family transcriptional regulator |
| 5008 | QGCI01000026.1 | MBX4073014.1 | open | 513 [NA] | 170 [AA] | <1-513 | DEE45_25830 | hypothetical protein |
| 5009 | QGCI01000026.1 | MBX4073015.1 | open | 834 [NA] | 277 [AA] | 640-1473 | DEE45_25835 | symmetrical bis(5'-nucleosyl)-tetraphosphatase |
| 5010 | QGCI01000026.1 | MBX4073016.1 | open | 876 [NA] | 291 [AA] | 1487-2362 | DEE45_25840 | chain-length determining protein |
| 5011 | QGCI01000026.1 | MBX4073017.1 | open | 1104 [NA] | 367 [AA] | 2355-3458 | DEE45_25845 | glycosyltransferase |
| 5012 | QGCI01000026.1 | MBX4073018.1 | open | 1068 [NA] | 355 [AA] | 3452-4519 | DEE45_25850 | hypothetical protein |
| 5013 | QGCI01000026.1 | MBX4073019.1 | open | 549 [NA] | 182 [AA] | 4516-5064 | DEE45_25855 | serine acetyltransferase |
| 5014 | QGCI01000026.1 | MBX4073020.1 | open | 1140 [NA] | 379 [AA] | 5068-6207 | DEE45_25860 | NAD-dependent epimerase/dehydratase family protein |
| 5015 | QGCI01000026.1 | MBX4073021.1 | open | 1260 [NA] | 419 [AA] | 6238-7497 | DEE45_25865 | hypothetical protein |
| 5016 | QGCI01000026.1 | MBX4073022.1 | open | 993 [NA] | 330 [AA] | 7504-8496 | DEE45_25870 | glycosyltransferase |
| 5017 | QGCI01000026.1 | MBX4073023.1 | open | 1452 [NA] | 483 [AA] | 8493-9944 | DEE45_25875 | hypothetical protein |
| 5018 | QGCI01000026.1 | MBX4073024.1 | open | 1140 [NA] | 379 [AA] | 9950-11089 | DEE45_25880 | DegT/DnrJ/EryC1/StrS family aminotransferase |
| 5019 | QGCI01000026.1 | MBX4073025.1 | open | 987 [NA] | 328 [AA] | 11086-12072 | DEE45_25885 | GNAT family N-acetyltransferase |
| 5020 | QGCI01000026.1 | MBX4073026.1 | open | 939 [NA] | 312 [AA] | 12038-12976 | DEE45_25890 | dTDP-4-dehydrorhamnose reductase |
| 5021 | QGCI01000026.1 | MBX4073027.1 | open | 555 [NA] | 184 [AA] | 12973-13527 | DEE45_25895 | dTDP-4-dehydrorhamnose 3,5-epimerase |
| 5022 | QGCI01000026.1 | MBX4073028.1 | open | 885 [NA] | 294 [AA] | 13524-14408 | DEE45_25900 | glucose-1-phosphate thymidylyltransferase RfbA |
| 5023 | QGCI01000026.1 | MBX4073029.1 | open | 1062 [NA] | 353 [AA] | 14424-15485 | DEE45_25905 | dTDP-glucose 4,6-dehydratase |
| 5024 | QGCI01000026.1 | MBX4073030.1 | open | 1389 [NA] | 462 [AA] | 15662-17050 | DEE45_25910 | phosphomannomutase/phosphoglucomutase |
| 5025 | QGCI01000026.1 | MBX4073031.1 | open | 999 [NA] | 332 [AA] | 17094-18092 | DEE45_25915 | lipopolysaccharide heptosyltransferase I |
| 5026 | QGCI01000026.1 | MBX4073032.1 | open | 1317 [NA] | 438 [AA] | 18092-19408 | DEE45_25920 | lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase |
| 5027 | QGCI01000026.1 | MBX4073033.1 | open | 681 [NA] | 226 [AA] | 19510-20190 | DEE45_25925 | META domain-containing protein |
| 5028 | QGCI01000026.1 | MBX4073034.1 | open | 1437 [NA] | 478 [AA] | 20191-21627 | DEE45_25930 | TolC family outer membrane protein |
| 5029 | QGCI01000026.1 | MBX4073035.1 | open | 333 [NA] | 110 [AA] | 21773-22105 | DEE45_25935 | sulfurtransferase |
| 5030 | QGCI01000026.1 | MBX4073036.1 | open | 651 [NA] | 216 [AA] | 22128-22778 | DEE45_25940 | protein-L-isoaspartate O-methyltransferase |
| 5031 | QGCI01000026.1 | MBX4073037.1 | open | 744 [NA] | 247 [AA] | 22874-23617 | DEE45_25945 | TetR/AcrR family transcriptional regulator |
| 5032 | QGCI01000026.1 | MBX4073038.1 | open | 258 [NA] | 85 [AA] | 23799-24056 | DEE45_25950 | YkgJ family cysteine cluster protein |
| 5033 | QGCI01000026.1 | MBX4073039.1 | open | 594 [NA] | 197 [AA] | 24063-24656 | DEE45_25955 | DUF1439 domain-containing protein |
| 5034 | QGCI01000026.1 | MBX4073040.1 | open | 882 [NA] | 293 [AA] | 24709-25590 | DEE45_25960 | undecaprenyl-diphosphate phosphatase |
| 5035 | QGCI01000026.1 | MBX4073041.1 | open | 1113 [NA] | 370 [AA] | 25710-26822 | DEE45_25965 | NADH:flavin oxidoreductase/NADH oxidase |
| 5036 | QGCI01000026.1 | MBX4073042.1 | open | 774 [NA] | 257 [AA] | 26848-27621 | DEE45_25970 | tRNA (guanosine(46)-N7)-methyltransferase TrmB |
| 5037 | QGCI01000026.1 | MBX4073043.1 | open | 909 [NA] | 302 [AA] | 27877-28785 | DEE45_25975 | LysR family transcriptional regulator |
| 5038 | QGCI01000026.1 | MBX4073044.1 | open | 693 [NA] | 230 [AA] | 28987->29680 | DEE45_25980 | S-methyl-5'-thioadenosine phosphorylase |
| 5039 | QGCI01000027.1 | MBX4073045.1 | open | 276 [NA] | 91 [AA] | 47-322 | DEE45_25985 | four-helix bundle copper-binding protein |
| 5040 | QGCI01000027.1 | MBX4073046.1 | open | 1815 [NA] | 604 [AA] | 520-2334 | DEE45_25990 | glycoside hydrolase family 15 protein |
| 5041 | QGCI01000027.1 | MBX4073047.1 | open | 996 [NA] | 331 [AA] | 2335-3330 | DEE45_25995 | SDR family oxidoreductase |
| 5042 | QGCI01000027.1 | MBX4073048.1 | open | 2679 [NA] | 892 [AA] | 3352-6030 | DEE45_26000 | hypothetical protein |
| 5043 | QGCI01000027.1 | MBX4073049.1 | open | 408 [NA] | 135 [AA] | 8378-8785 | DEE45_26010 | Hg(II)-responsive transcriptional regulator |
| 5044 | QGCI01000027.1 | MBX4073050.1 | open | 351 [NA] | 116 [AA] | 8857-9207 | DEE45_26015 | mercuric ion transporter MerT |
| 5045 | QGCI01000027.1 | MBX4073051.1 | open | 273 [NA] | 90 [AA] | 9221-9493 | DEE45_26020 | mercury resistance system periplasmic binding protein MerP |
| 5046 | QGCI01000027.1 | MBX4073052.1 | open | 420 [NA] | 139 [AA] | 9522-9941 | DEE45_26025 | organomercurial transporter MerC |
| 5047 | QGCI01000027.1 | MBX4073053.1 | open | 1686 [NA] | 561 [AA] | 9982-11667 | DEE45_26030 | mercury(II) reductase |
| 5048 | QGCI01000027.1 | MBX4073054.1 | open | 255 [NA] | 84 [AA] | 11696-11950 | DEE45_26035 | DoxX family membrane protein |
| 5049 | QGCI01000027.1 | MBX4073055.1 | open | 1506 [NA] | 501 [AA] | 11881-13386 | DEE45_26040 | tyrosine-type recombinase/integrase |
| 5050 | QGCI01000027.1 | MBX4073056.1 | open | 939 [NA] | 312 [AA] | 13383-14321 | DEE45_26045 | DNA-binding protein |
| 5051 | QGCI01000027.1 | MBX4073057.1 | open | 177 [NA] | 58 [AA] | 14920-15096 | DEE45_26050 | hypothetical protein |
| 5052 | QGCI01000027.1 | MBX4073058.1 | open | 459 [NA] | 152 [AA] | 15699-16157 | DEE45_26055 | MgtC/SapB family protein |
| 5053 | QGCI01000027.1 | MBX4073059.1 | open | 651 [NA] | 216 [AA] | 16407-17057 | DEE45_26060 | heavy metal efflux RND transporter CzcN |
| 5054 | QGCI01000027.1 | MBX4073060.1 | open | 348 [NA] | 115 [AA] | 17372-17719 | DEE45_26065 | CDF family cobalt-zinc-cadmium transporter CzcI |
| 5055 | QGCI01000027.1 | MBX4073061.1 | open | 1257 [NA] | 418 [AA] | 17795-19051 | DEE45_26070 | heavy metal efflux RND transporter CzcC |
| 5056 | QGCI01000027.1 | MBX4073062.1 | open | 1563 [NA] | 520 [AA] | 19069-20631 | DEE45_26075 | heavy metal efflux RND transporter CzcB |
| 5057 | QGCI01000027.1 | MBX4073063.1 | open | 3192 [NA] | 1063 [AA] | 20648-23839 | DEE45_26080 | heavy metal efflux RND transporter CzcA |
| 5058 | QGCI01000027.1 | MBX4073064.1 | open | 951 [NA] | 316 [AA] | 23890-24840 | DEE45_26085 | cation diffusion facilitator family transporter |
| 5059 | QGCI01000027.1 | MBX4073065.1 | open | 678 [NA] | 225 [AA] | 24842-25519 | DEE45_26090 | heavy metal homeostasis two-component system response regulator CzcR |
| 5060 | QGCI01000027.1 | MBX4073066.1 | open | 1431 [NA] | 476 [AA] | 25524-26954 | DEE45_26095 | sensor histidine kinase CzcS |
| 5061 | QGCI01000027.1 | MBX4073067.1 | open | 402 [NA] | 133 [AA] | 27063-27464 | DEE45_26100 | copper-binding periplasmic protein CzcE |
| 5062 | QGCI01000027.1 | MBX4073068.1 | open | 279 [NA] | 92 [AA] | 27763-28041 | DEE45_26105 | hypothetical protein |
| 5063 | QGCI01000028.1 | MBX4073069.1 | open | 327 [NA] | 108 [AA] | 104-430 | DEE45_26115 | DUF4131 domain-containing protein |
| 5064 | QGCI01000028.1 | MBX4073070.1 | open | 630 [NA] | 209 [AA] | 923-1552 | DEE45_26120 | hypothetical protein |
| 5065 | QGCI01000028.1 | MBX4073071.1 | open | 3072 [NA] | 1023 [AA] | 1790-4861 | DEE45_26125 | type I restriction endonuclease subunit R |
| 5066 | QGCI01000028.1 | MBX4073072.1 | open | 1422 [NA] | 473 [AA] | 4848-6269 | DEE45_26130 | restriction endonuclease subunit S |
| 5067 | QGCI01000028.1 | MBX4073073.1 | open | 2385 [NA] | 794 [AA] | 6266-8650 | DEE45_26135 | type I restriction-modification system subunit M |
| 5068 | QGCI01000028.1 | MBX4073074.1 | open | 1731 [NA] | 576 [AA] | 8662-10392 | DEE45_26140 | DUF262 domain-containing HNH endonuclease family protein |
| 5069 | QGCI01000028.1 | MBX4073075.1 | open | 900 [NA] | 299 [AA] | 10408-11307 | DEE45_26145 | WYL domain-containing protein |
| 5070 | QGCI01000028.1 | MBX4073076.1 | open | 2205 [NA] | 734 [AA] | 11533-13737 | DEE45_26150 | ankyrin repeat domain-containing protein |
| 5071 | QGCI01000028.1 | MBX4073077.1 | open | 204 [NA] | 67 [AA] | 13734-13937 | DEE45_26155 | hypothetical protein |
| 5072 | QGCI01000028.1 | MBX4073078.1 | open | 1635 [NA] | 544 [AA] | 14639-16273 | DEE45_26160 | tyrosine-type recombinase/integrase |
| 5073 | QGCI01000029.1 | MBX4073079.1 | open | 1557 [NA] | 518 [AA] | 92-1648 | DEE45_26170 | DHA2 family efflux MFS transporter permease subunit |
| 5074 | QGCI01000029.1 | MBX4073080.1 | open | 1290 [NA] | 429 [AA] | 1652-2941 | DEE45_26175 | HlyD family secretion protein |
| 5075 | QGCI01000029.1 | MBX4073081.1 | open | 1530 [NA] | 509 [AA] | 2998-4527 | DEE45_26180 | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor |
| 5076 | QGCI01000029.1 | MBX4073082.1 | open | 519 [NA] | 172 [AA] | 4609-5127 | DEE45_26185 | MarR family transcriptional regulator |
| 5077 | QGCI01000029.1 | MBX4073083.1 | open | 1821 [NA] | 606 [AA] | 5378-7198 | DEE45_26190 | translational GTPase TypA |
| 5078 | QGCI01000029.1 | MBX4073084.1 | open | 1590 [NA] | 529 [AA] | 7513-9102 | DEE45_26195 | sulfurtransferase |
| 5079 | QGCI01000029.1 | MBX4073085.1 | open | 870 [NA] | 289 [AA] | 9359-10228 | DEE45_26200 | LysR family transcriptional regulator |
| 5080 | QGCI01000029.1 | MBX4073086.1 | open | 906 [NA] | 301 [AA] | 10221-11126 | DEE45_26205 | sterol desaturase family protein |
| 5081 | QGCI01000029.1 | MBX4073087.1 | open | 1110 [NA] | 369 [AA] | 11274-12383 | DEE45_26210 | enoyl-CoA hydratase/isomerase family protein |
| 5082 | QGCI01000029.1 | MBX4073088.1 | open | 351 [NA] | 116 [AA] | 12478-12828 | DEE45_26215 | phage tail assembly chaperone |
| 5083 | QGCI01000029.1 | MBX4073089.1 | open | 234 [NA] | 77 [AA] | 12995-13228 | DEE45_26220 | hypothetical protein |
| 5084 | QGCI01000029.1 | MBX4073090.1 | open | 522 [NA] | 173 [AA] | 14425-14946 | DEE45_26230 | lysis protein |
| 5085 | QGCI01000029.1 | MBX4073091.1 | open | 579 [NA] | 192 [AA] | 15203-15781 | DEE45_26235 | hypothetical protein |
| 5086 | QGCI01000030.1 | MBX4073092.1 | open | 558 [NA] | 185 [AA] | 539-1096 | DEE45_26250 | TlpA family protein disulfide reductase |
| 5087 | QGCI01000030.1 | MBX4073093.1 | open | 1062 [NA] | 353 [AA] | 1086-2147 | DEE45_26255 | transporter |
| 5088 | QGCI01000030.1 | MBX4073094.1 | open | 417 [NA] | 138 [AA] | 2286-2702 | DEE45_26260 | DUF2946 domain-containing protein |
| 5089 | QGCI01000030.1 | MBX4073095.1 | open | 192 [NA] | 63 [AA] | 4637-4828 | DEE45_26270 | hypothetical protein |
| 5090 | QGCI01000030.1 | MBX4073096.1 | open | 1263 [NA] | 420 [AA] | 4867-6129 | DEE45_26275 | three-Cys-motif partner protein TcmP |
| 5091 | QGCI01000030.1 | MBX4073097.1 | open | 759 [NA] | 252 [AA] | 6209-6967 | DEE45_26280 | phage Gp37/Gp68 family protein |
| 5092 | QGCI01000030.1 | MBX4073098.1 | open | 1410 [NA] | 469 [AA] | 10190-11599 | DEE45_26305 | hypothetical protein |
| 5093 | QGCI01000030.1 | MBX4073099.1 | open | 2262 [NA] | 753 [AA] | 11912-14173 | DEE45_26310 | hypothetical protein |
| 5094 | QGCI01000030.1 | MBX4073100.1 | open | 948 [NA] | 315 [AA] | 14622-15569 | DEE45_26315 | LysR family transcriptional regulator |
| 5095 | QGCI01000031.1 | MBX4073101.1 | open | 339 [NA] | 112 [AA] | <1-341 | DEE45_26325 | hypothetical protein |
| 5096 | QGCI01000031.1 | MBX4073102.1 | open | 249 [NA] | 82 [AA] | 1181-1429 | DEE45_26330 | DUF3562 domain-containing protein |
| 5097 | QGCI01000031.1 | MBX4073103.1 | open | 1761 [NA] | 586 [AA] | 2826-4586 | DEE45_26335 | EAL domain-containing protein |
| 5098 | QGCI01000031.1 | MBX4073104.1 | open | 1092 [NA] | 363 [AA] | 6226-7317 | DEE45_26340 | PepSY domain-containing protein |
| 5099 | QGCI01000033.1 | MBX4073105.1 | open | 1608 [NA] | 535 [AA] | 441-2048 | DEE45_26375 | glycosyltransferase family 39 protein |
| 5100 | QGCI01000033.1 | MBX4073106.1 | open | 384 [NA] | 127 [AA] | 2045-2428 | DEE45_26380 | GtrA family protein |
| 5101 | QGCI01000033.1 | MBX4073107.1 | open | 1122 [NA] | 373 [AA] | 2425-3546 | DEE45_26385 | glycosyltransferase family 2 protein |
| 5102 | QGCI01000033.1 | MBX4073108.1 | open | 303 [NA] | 100 [AA] | 3779-4081 | DEE45_26390 | zinc ribbon domain-containing protein |
| 5103 | QGCI01000034.1 | MBX4073109.1 | open | 378 [NA] | 125 [AA] | <1-378 | DEE45_26400 | succinate dehydrogenase, cytochrome b556 subunit |
| 5104 | QGCI01000034.1 | MBX4073110.1 | open | 366 [NA] | 121 [AA] | 389-754 | DEE45_26405 | succinate dehydrogenase, hydrophobic membrane anchor protein |
| 5105 | QGCI01000034.1 | MBX4073111.1 | open | 1779 [NA] | 592 [AA] | 758-2536 | DEE45_26410 | succinate dehydrogenase flavoprotein subunit |
| 5106 | QGCI01000034.1 | MBX4073112.1 | open | 581 [NA] | 193 [AA] | 2559->3139 | DEE45_26415 | succinate dehydrogenase iron-sulfur subunit |
| 5107 | QGCI01000035.1 | MBX4073113.1 | open | 423 [NA] | 140 [AA] | 483-905 | DEE45_26425 | flagellar basal body rod protein FlgB |
| 5108 | QGCI01000036.1 | MBX4073114.1 | open | 372 [NA] | 123 [AA] | 79-450 | DEE45_26435 | transposase |
| 5109 | QGCI01000036.1 | MBX4073115.1 | open | 291 [NA] | 96 [AA] | 492-782 | DEE45_26440 | IS66 family insertion sequence element accessory protein TnpB |
| 5110 | QGCI01000036.1 | MBX4073116.1 | open | 1530 [NA] | 509 [AA] | 845-2374 | DEE45_26445 | IS66 family transposase |
| 5111 | QGCI01000037.1 | MBX4073117.1 | open | 456 [NA] | 151 [AA] | 193-648 | DEE45_26450 | DUF1566 domain-containing protein |
| 5112 | QGCI01000037.1 | MBX4073118.1 | open | 453 [NA] | 150 [AA] | 679-1131 | DEE45_26455 | DUF1566 domain-containing protein |
| 5113 | QGCI01000037.1 | MBX4073119.1 | open | 210 [NA] | 69 [AA] | 1162->1371 | DEE45_26460 | DUF1566 domain-containing protein |
| 5114 | QGCI01000038.1 | MBX4073120.1 | open | 1227 [NA] | 408 [AA] | 56-1284 | DEE45_26465 | IS3 family transposase |
| 5115 | QGCI01000039.1 | MBX4073121.1 | open | 1122 [NA] | 373 [AA] | 17-1137 | DEE45_26470 | IS3 family transposase |
| 5116 | QGCI01000040.1 | MBX4073122.1 | open | 1089 [NA] | 362 [AA] | 40-1127 | DEE45_26475 | IS3 family transposase |